Best TWAS P=9.78e-08 · Best GWAS P=1.48e-07 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Ncaph2 | alternative polyA | ENSRNOT00000055808 | 0.02 | 1870 | 0.01 | 1.0e-02 | 5.09 | 3.50e-07 | 0.53 | FALSE |
Adipose | Lmf2 | gene expression | ENSRNOG00000030633 | 0.69 | 180 | 0.63 | 9.2e-90 | -5.18 | 2.18e-07 | 0.69 | FALSE |
Adipose | Plxnb2 | intron excision ratio | chr7:120245549:120248063 | 0.03 | 1569 | 0.01 | 2.3e-02 | -5.22 | 1.74e-07 | 0.55 | FALSE |
BLA | Plxnb2 | gene expression | ENSRNOG00000007133 | 0.32 | 26 | 0.29 | 8.2e-16 | 5.15 | 2.56e-07 | 0.61 | FALSE |
BLA | Ppp6r2 | intron excision ratio | chr7:120315244:120324177 | 0.05 | 1603 | 0.03 | 7.3e-03 | -5.13 | 2.88e-07 | 0.44 | FALSE |
Brain | Plxnb2 | gene expression | ENSRNOG00000007133 | 0.35 | 1569 | 0.39 | 3.1e-38 | 5.21 | 1.89e-07 | 0.69 | FALSE |
Brain | Sbf1 | isoform ratio | ENSRNOT00000072955 | 0.02 | 6 | 0.02 | 4.4e-03 | 5.22 | 1.82e-07 | 0.56 | FALSE |
Brain | Sbf1 | isoform ratio | ENSRNOT00000119425 | 0.02 | 6 | 0.02 | 4.1e-03 | -5.24 | 1.62e-07 | 0.56 | FALSE |
Brain | Ppp6r2 | intron excision ratio | chr7:120318886:120324177 | 0.03 | 56 | 0.02 | 5.9e-03 | 5.23 | 1.68e-07 | 0.58 | FALSE |
IL | Mapk11 | gene expression | ENSRNOG00000006984 | 0.22 | 1586 | 0.18 | 4.8e-05 | -5.25 | 1.51e-07 | 0.54 | FALSE |
LHb | Mapk11 | gene expression | ENSRNOG00000006984 | 0.46 | 1 | 0.27 | 4.6e-07 | -5.12 | 3.02e-07 | 0.58 | FALSE |
LHb | Lmf2 | gene expression | ENSRNOG00000030633 | 0.47 | 1866 | 0.36 | 2.0e-09 | -5.2 | 1.96e-07 | 0.63 | FALSE |
Liver | Sbf1 | gene expression | ENSRNOG00000008392 | 0.06 | 1 | 0.05 | 5.0e-06 | 5.2 | 1.95e-07 | 0.69 | FALSE |
Liver | Ncaph2 | gene expression | ENSRNOG00000009598 | 0.12 | 1 | 0.1 | 4.5e-11 | 5.1 | 3.38e-07 | 0.73 | FALSE |
Liver | ENSRNOG00000066185 | gene expression | ENSRNOG00000066185 | 0.31 | 1 | 0.17 | 7.3e-19 | -5.11 | 3.25e-07 | 0.72 | FALSE |
Liver | ENSRNOG00000066458 | mRNA stability | ENSRNOG00000066458 | 0.2 | 1913 | 0.22 | 5.3e-24 | 5.33 | 9.78e-08 | 0.72 | TRUE |
NAcc | Ncaph2 | gene expression | ENSRNOG00000009598 | 0.04 | 1 | 0.03 | 5.3e-03 | -5.12 | 3.02e-07 | 0.07 | FALSE |
NAcc | Selenoo | intron excision ratio | chr7:120171788:120174402 | 0.07 | 1632 | 0.06 | 5.3e-05 | -5.19 | 2.12e-07 | 0.43 | FALSE |
NAcc | Mapk11 | mRNA stability | ENSRNOG00000006984 | 0.04 | 1 | 0.03 | 3.4e-03 | 5.2 | 1.95e-07 | 0.07 | FALSE |
OFC | Plxnb2 | gene expression | ENSRNOG00000007133 | 0.93 | 1 | 0.39 | 3.0e-10 | 5.11 | 3.25e-07 | 0.72 | FALSE |
PL | Mapk11 | gene expression | ENSRNOG00000006984 | 0.14 | 1587 | 0.14 | 9.1e-11 | -5.21 | 1.88e-07 | 0.63 | FALSE |