Best TWAS P=5.44e-10 · Best GWAS P=8.88e-12 conditioned to 2.70e-05
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
BLA | Med30 | gene expression | ENSRNOG00000004844 | 0.07 | 1914 | 0.05 | 1.3e-03 | -5.31 | 1.09e-07 | 0.42 | FALSE |
BLA | Ext1 | mRNA stability | ENSRNOG00000024886 | 0.38 | 1844 | 0.29 | 1.2e-15 | 5.23 | 1.72e-07 | 0.63 | FALSE |
Brain | Trps1 | gene expression | ENSRNOG00000024998 | 0.06 | 1999 | 0.07 | 8.2e-07 | 5.48 | 4.20e-08 | 0.48 | FALSE |
Brain | Med30 | mRNA stability | ENSRNOG00000004844 | 0.04 | 1914 | 0.02 | 4.3e-03 | 6.21 | 5.44e-10 | 0.43 | TRUE |
Brain | Ext1 | mRNA stability | ENSRNOG00000024886 | 0.1 | 1844 | 0.09 | 6.9e-09 | 5.43 | 5.79e-08 | 0.56 | FALSE |
LHb | Rad21 | gene expression | ENSRNOG00000004420 | 0.22 | 2 | 0.12 | 1.1e-03 | -5.88 | 4.06e-09 | 0.38 | FALSE |
Liver | Med30 | intron excision ratio | chr7:84012067:84015230 | 0.06 | 68 | 0.02 | 1.1e-03 | -5.78 | 7.43e-09 | 0.23 | FALSE |
PL | Trps1 | isoform ratio | ENSRNOT00000050774 | 0.04 | 1997 | 0.02 | 1.0e-02 | 5.39 | 6.93e-08 | 0.32 | FALSE |
PL | Ext1 | mRNA stability | ENSRNOG00000024886 | 0.51 | 68 | 0.41 | 7.2e-33 | 5.37 | 7.86e-08 | 0.69 | FALSE |