chr1:140,614,300-142,727,457

Trait: Total locomotion distance, hab. session 1

Best TWAS P=2.88e-13 · Best GWAS P=2.81e-13 conditioned to 3.92e-215

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Ctsc alternative polyA ENSRNOT00000022342 0.16 2515 0.17 2.8e-18 5.46 4.80e-08 0 FALSE
Adipose Ctsc alternative polyA ENSRNOT00000097085 0.17 2515 0.19 1.5e-20 -5.63 1.85e-08 0.03 FALSE
Adipose Ctsc isoform ratio ENSRNOT00000022342 0.16 2515 0.16 4.3e-17 5.72 1.07e-08 0.19 FALSE
Adipose Ctsc isoform ratio ENSRNOT00000097085 0.18 2515 0.18 1.3e-19 -5.85 4.94e-09 0.4 FALSE
Adipose Ctsc intron excision ratio chr1:142031177:142036233 0.05 2515 0.04 6.5e-05 -6.02 1.73e-09 0.6 FALSE
Adipose Ctsc intron excision ratio chr1:142031177:142045569 0.04 2515 0.02 4.7e-03 5.74 9.28e-09 0.49 FALSE
BLA Ctsc alternative polyA ENSRNOT00000022342 0.07 2518 0.01 5.1e-02 5.51 3.54e-08 0.2 FALSE
BLA Ctsc alternative polyA ENSRNOT00000097085 0.07 2518 0.02 3.2e-02 -5.3 1.16e-07 0.17 FALSE
BLA Ctsc gene expression ENSRNOG00000016496 0.12 1 0.1 5.0e-06 -5.9 3.71e-09 0.03 FALSE
BLA Ctsc mRNA stability ENSRNOG00000016496 0.05 1 0.03 1.5e-02 7.17 7.49e-13 0.1 FALSE
Brain Grm5 gene expression ENSRNOG00000016429 0.16 6 0.15 5.3e-14 6.24 4.50e-10 0.64 FALSE
Brain Ctsc gene expression ENSRNOG00000016496 0.23 2518 0.31 4.5e-29 -5.32 1.06e-07 0 FALSE
Brain Ctsc isoform ratio ENSRNOT00000022342 0.03 1 0.04 1.7e-04 7.3 2.88e-13 0.7 TRUE
Eye Ctsc gene expression ENSRNOG00000016496 0.29 1 0.15 2.9e-03 -6.49 8.36e-11 0.06 FALSE
IL Ctsc gene expression ENSRNOG00000016496 0.3 1 0.16 1.0e-04 -6.65 2.83e-11 0.06 FALSE
NAcc Ctsc gene expression ENSRNOG00000016496 0.12 2516 0.12 3.3e-09 -6.16 7.41e-10 0.46 FALSE
PL Ctsc gene expression ENSRNOG00000016496 0.14 87 0.13 8.2e-10 -5.62 1.94e-08 0.66 FALSE
PL Grm5 mRNA stability ENSRNOG00000016429 0.04 1 0.03 1.3e-03 -7.19 6.68e-13 0.06 FALSE