Hub : Traits : Light reinforcement 1 : ← : →

chr19:17,307,470-20,307,530

Trait: Light reinforcement 1

Best TWAS P=1.99e-08 · Best GWAS P=3.09e-09 conditioned to 1.00e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Nod2	gene expression	ENSRNOG00000014124	0.03	1	0	9.9e-02	-5.14	2.80e-07	0.03	FALSE
Adipose	Snx20	gene expression	ENSRNOG00000014202	0.06	1	0.05	1.1e-06	5.3	1.19e-07	0.22	FALSE
Adipose	Adcy7	gene expression	ENSRNOG00000014776	0.02	1	0.01	1.6e-02	5.52	3.48e-08	0.03	FALSE
Adipose	Snx20	mRNA stability	ENSRNOG00000014202	0.16	442	0.16	2.3e-17	5.18	2.23e-07	0.45	FALSE
BLA	Cyld	alternative TSS	ENSRNOT00000018888	0.11	1	0.12	6.6e-07	-5.51	3.63e-08	0.42	FALSE
BLA	Cyld	alternative TSS	ENSRNOT00000091626	0.11	1788	0.11	1.4e-06	5.45	5.14e-08	0.44	FALSE
BLA	Cyld	gene expression	ENSRNOG00000014048	0.4	60	0.4	1.2e-22	-5.38	7.34e-08	0.46	FALSE
BLA	Cyld	intron excision ratio	chr19:18338598:18344904	0.13	1	0.09	1.5e-05	5.19	2.16e-07	0.06	FALSE
BLA	Cyld	intron excision ratio	chr19:18365476:18373011	0.28	19	0.18	6.3e-10	-5.17	2.28e-07	0.44	FALSE
BLA	Sall1	mRNA stability	ENSRNOG00000013907	0.19	2035	0.14	6.0e-08	-5.13	2.92e-07	0.5	FALSE
BLA	Snx20	mRNA stability	ENSRNOG00000014202	0.06	1	0.03	1.2e-02	5.29	1.22e-07	0.04	FALSE
BLA	Nkd1	mRNA stability	ENSRNOG00000014293	0.08	1	0.06	2.5e-04	-5.27	1.36e-07	0.04	FALSE
Brain	Cyld	alternative TSS	ENSRNOT00000018888	0.19	48	0.31	3.4e-29	-5.51	3.67e-08	0.41	FALSE
Brain	Cyld	alternative TSS	ENSRNOT00000091626	0.19	26	0.31	3.8e-29	5.55	2.82e-08	0.41	FALSE
Brain	Cyld	gene expression	ENSRNOG00000014048	0.53	58	0.67	2.9e-82	-5.52	3.37e-08	0.43	FALSE
Brain	Nod2	gene expression	ENSRNOG00000014124	0.25	128	0.32	1.1e-30	-5.35	8.78e-08	0.59	FALSE
Brain	Snx20	gene expression	ENSRNOG00000014202	0.17	25	0.24	7.1e-22	5.37	7.98e-08	0.42	FALSE
Brain	Nkd1	gene expression	ENSRNOG00000014293	0.05	1834	0.05	3.2e-05	5.5	3.79e-08	0.47	FALSE
Brain	Brd7	gene expression	ENSRNOG00000014419	0.06	1	0.09	8.5e-09	-5.41	6.23e-08	0.39	FALSE
Brain	Zfp423	gene expression	ENSRNOG00000014658	0.2	51	0.27	9.8e-25	-5.46	4.75e-08	0.64	TRUE
Brain	ENSRNOG00000062389	gene expression	ENSRNOG00000062389	0.02	1	0.03	4.3e-04	5.52	3.48e-08	0.04	FALSE
Brain	Cyld	intron excision ratio	chr19:18338598:18344904	0.03	1	0.02	4.8e-03	5.5	3.79e-08	0.05	FALSE
Brain	Cyld	intron excision ratio	chr19:18345020:18348718	0.09	37	0.1	1.2e-09	5.39	7.05e-08	0.39	FALSE
Brain	Cyld	intron excision ratio	chr19:18365476:18373011	0.09	1788	0.13	6.2e-12	-5.43	5.57e-08	0.39	FALSE
Brain	Cyld	intron excision ratio	chr19:18365476:18373513	0.08	1	0.02	2.5e-03	5.12	3.02e-07	0.03	FALSE
Brain	ENSRNOG00000069560	intron excision ratio	chr19:18008033:18008164	0.06	1	0.07	2.1e-07	5.31	1.11e-07	0.28	FALSE
Brain	Sall1	mRNA stability	ENSRNOG00000013907	0.21	1	0.29	6.4e-27	-5.61	1.99e-08	0.69	TRUE
Brain	Snx20	mRNA stability	ENSRNOG00000014202	0.12	319	0.18	1.2e-16	5.44	5.27e-08	0.41	FALSE
Brain	Nkd1	mRNA stability	ENSRNOG00000014293	0.08	25	0.11	2.8e-10	-5.58	2.41e-08	0.5	FALSE
Eye	Nkd1	gene expression	ENSRNOG00000014293	0.26	14	0.13	5.2e-03	5.5	3.73e-08	0.25	FALSE
Eye	Cyld	intron excision ratio	chr19:18365476:18373513	0.3	1	0.12	6.3e-03	-5.43	5.76e-08	0.06	FALSE
IL	Nod2	gene expression	ENSRNOG00000014124	0.18	1	0.2	1.3e-05	-5.3	1.15e-07	0.07	FALSE
IL	Sall1	mRNA stability	ENSRNOG00000013907	0.24	1	0.23	3.0e-06	-5.45	4.96e-08	0.09	FALSE
LHb	Zfp423	alternative TSS	ENSRNOT00000101491	0.18	2	0.07	9.5e-03	5.27	1.35e-07	0.34	FALSE
LHb	Zfp423	alternative TSS	ENSRNOT00000101895	0.19	3	0.1	2.5e-03	-5.15	2.66e-07	0.35	FALSE
LHb	Cyld	gene expression	ENSRNOG00000014048	0.3	1	0.16	1.0e-04	-5.52	3.41e-08	0.07	FALSE
LHb	Nod2	gene expression	ENSRNOG00000014124	0.39	1	0.25	1.1e-06	-5.37	8.04e-08	0.1	FALSE
LHb	Snx20	gene expression	ENSRNOG00000014202	0.29	1	0.13	6.2e-04	5.31	1.09e-07	0.06	FALSE
LHb	Cbln1	mRNA stability	ENSRNOG00000000010	0.32	5	0.09	4.0e-03	5.53	3.29e-08	0.49	FALSE
Liver	Snx20	gene expression	ENSRNOG00000014202	0.08	229	0.07	3.7e-08	5.36	8.19e-08	0.45	FALSE
Liver	Nkd1	gene expression	ENSRNOG00000014293	0.03	1	0.02	2.0e-03	5.47	4.49e-08	0.04	FALSE
Liver	ENSRNOG00000069560	gene expression	ENSRNOG00000069560	0.17	175	0.19	3.4e-21	-5.21	1.84e-07	0.46	FALSE
Liver	Sall1	mRNA stability	ENSRNOG00000013907	0.63	595	0.57	2.5e-77	-5.37	7.86e-08	0.47	FALSE
NAcc	Cyld	gene expression	ENSRNOG00000014048	0.14	21	0.15	2.7e-11	-5.35	8.72e-08	0.42	FALSE
NAcc	Snx20	gene expression	ENSRNOG00000014202	0.04	1	0.03	2.1e-03	5.24	1.56e-07	0.04	FALSE
NAcc	Zfp423	gene expression	ENSRNOG00000014658	0.09	1324	0.07	3.2e-06	-5.42	5.84e-08	0.59	FALSE
NAcc	Cyld	intron excision ratio	chr19:18338598:18344904	0.11	82	0.09	5.3e-07	5.42	5.88e-08	0.42	FALSE
NAcc	Cyld	intron excision ratio	chr19:18345020:18348718	0.08	1	0.06	6.1e-05	5.14	2.79e-07	0.04	FALSE
NAcc	Cyld	intron excision ratio	chr19:18349933:18360457	0.05	1	0.03	5.2e-03	-5.28	1.30e-07	0.04	FALSE
NAcc	Cyld	intron excision ratio	chr19:18365476:18373011	0.15	1784	0.15	1.8e-11	-5.4	6.83e-08	0.48	FALSE
NAcc	Cyld	intron excision ratio	chr19:18365476:18373606	0.03	1784	0.02	1.6e-02	5.47	4.55e-08	0.36	FALSE
NAcc	Sall1	mRNA stability	ENSRNOG00000013907	0.33	57	0.26	8.0e-20	-5.24	1.61e-07	0.46	FALSE
OFC	Cyld	alternative TSS	ENSRNOT00000091626	0.15	4	0.04	4.4e-02	5.13	2.87e-07	0.15	FALSE
OFC	Cyld	gene expression	ENSRNOG00000014048	0.31	1	0.31	4.6e-08	-5.37	8.03e-08	0.13	FALSE
OFC	Zfp423	gene expression	ENSRNOG00000014658	0.53	13	0.4	1.2e-10	-5.37	7.92e-08	0.6	FALSE
PL	Cyld	alternative TSS	ENSRNOT00000018888	0.13	1	0.07	5.0e-06	-5.51	3.62e-08	0.3	FALSE
PL	Cyld	alternative TSS	ENSRNOT00000091626	0.11	1784	0.07	7.9e-06	5.22	1.81e-07	0.47	FALSE
PL	Zfp423	alternative TSS	ENSRNOT00000020028	0.05	1324	0.03	1.4e-03	-5.13	2.94e-07	0.56	FALSE
PL	Zfp423	alternative TSS	ENSRNOT00000101491	0.08	1324	0.06	1.3e-05	5.13	2.93e-07	0.57	FALSE
PL	Zfp423	alternative TSS	ENSRNOT00000101895	0.08	1324	0.08	1.8e-06	-5.1	3.41e-07	0.58	FALSE
PL	Cyld	gene expression	ENSRNOG00000014048	0.39	53	0.36	1.1e-28	-5.42	6.09e-08	0.48	FALSE
PL	Tent4b	gene expression	ENSRNOG00000024212	0.03	1	0.02	1.2e-02	5.51	3.60e-08	0.04	FALSE
PL	Cyld	intron excision ratio	chr19:18338598:18344904	0.08	1	0.06	1.7e-05	5.1	3.45e-07	0.06	FALSE
PL	Cyld	intron excision ratio	chr19:18365476:18368246	0.03	1	0.02	8.2e-03	5.41	6.44e-08	0.04	FALSE
PL	Cyld	intron excision ratio	chr19:18365476:18373011	0.12	1784	0.12	4.7e-09	-5.48	4.17e-08	0.45	FALSE
PL	Sall1	mRNA stability	ENSRNOG00000013907	0.25	37	0.26	1.7e-19	-5.45	5.17e-08	0.48	FALSE
PL	Snx20	mRNA stability	ENSRNOG00000014202	0.05	1	0.03	2.0e-03	5.24	1.56e-07	0.04	FALSE
PL	Nkd1	mRNA stability	ENSRNOG00000014293	0.03	1	0.01	4.2e-02	-5.48	4.29e-08	0.04	FALSE