Best TWAS P=4.07e-08 · Best GWAS P=3.10e-08 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Qrfpr | gene expression | Qrfpr | 0.26 | 8 | 0.14 | 2.2e-15 | -5.45 | 4.93e-08 | 0.59 | FALSE |
| BLA | Qrfpr | gene expression | Qrfpr | 0.36 | 1 | 0.21 | 2.2e-11 | -5.32 | 1.06e-07 | 0.61 | FALSE |
| Brain | Dcun1d1 | alternative polyA | XM_006232262.4 | 0.11 | 2149 | 0.04 | 4.6e-05 | -5.29 | 1.20e-07 | 0.59 | FALSE |
| Brain | Dcun1d1 | alternative polyA | XM_006232263.4 | 0.1 | 2149 | 0.04 | 4.6e-05 | 5.21 | 1.91e-07 | 0.58 | FALSE |
| Brain | Mccc1 | alternative polyA | XM_039101988.1 | 0.04 | 2263 | 0.03 | 1.3e-03 | -5.23 | 1.68e-07 | 0.5 | FALSE |
| Brain | Mccc1 | alternative polyA | XM_039101989.1 | 0.04 | 2263 | 0.03 | 1.3e-03 | 5.24 | 1.64e-07 | 0.5 | FALSE |
| Brain | Qrfpr | gene expression | Qrfpr | 0.7 | 50 | 0.64 | 1.5e-77 | 5.33 | 9.59e-08 | 0.6 | FALSE |
| Brain | Dcun1d1 | isoform ratio | XM_006232262.4 | 0.05 | 1 | 0.02 | 6.7e-03 | 5.49 | 4.07e-08 | 0.08 | TRUE |
| Brain | Mccc1 | isoform ratio | XM_039101989.1 | 0.04 | 2263 | 0.02 | 2.6e-03 | 5.34 | 9.07e-08 | 0.52 | FALSE |
| Brain | Qrfpr | mRNA stability | Qrfpr | 0.4 | 14 | 0.28 | 2.9e-26 | 5.33 | 9.90e-08 | 0.6 | FALSE |
| Eye | Dcun1d1 | alternative TSS | NM_001395100.1 | 0.34 | 1 | 0.13 | 5.7e-03 | 5.43 | 5.72e-08 | 0.06 | FALSE |
| IL | Qrfpr | gene expression | Qrfpr | 0.76 | 27 | 0.31 | 3.7e-08 | 5.23 | 1.71e-07 | 0.61 | TRUE |
| Liver | Anxa5 | intron excision ratio | chr2_119326053_119327400 | 0.03 | 1 | 0.01 | 2.3e-02 | -5.28 | 1.30e-07 | 0.03 | FALSE |
| Liver | Anxa5 | intron excision ratio | chr2_119327513_119329846 | 0.03 | 1 | -0 | 4.2e-01 | 5.28 | 1.30e-07 | 0.03 | FALSE |
| NAcc | Mccc1 | alternative polyA | XM_039101988.1 | 0.03 | 1 | 0.01 | 1.1e-02 | 5.18 | 2.22e-07 | 0.03 | FALSE |
| NAcc | Mccc1 | alternative polyA | XM_039101989.1 | 0.03 | 1 | 0.01 | 1.2e-02 | -5.18 | 2.22e-07 | 0.03 | FALSE |
| NAcc | Bbs7 | gene expression | Bbs7 | 0.06 | 1 | 0.03 | 8.9e-05 | 5.41 | 6.40e-08 | 0.42 | FALSE |
| NAcc | Mccc1 | isoform ratio | XM_039101989.1 | 0.04 | 1 | 0.01 | 6.5e-03 | -5.25 | 1.49e-07 | 0.03 | FALSE |
| NAcc | Anxa5 | intron excision ratio | chr2_119326053_119327400 | 0.14 | 2372 | 0.1 | 4.4e-12 | 5.22 | 1.75e-07 | 0.31 | FALSE |
| PL | Mccc1 | alternative polyA | XM_039101988.1 | 0.08 | 1 | 0.06 | 1.3e-07 | 5.23 | 1.65e-07 | 0.5 | FALSE |
| PL | Mccc1 | alternative polyA | XM_039101989.1 | 0.08 | 1 | 0.06 | 1.1e-07 | -5.23 | 1.65e-07 | 0.5 | FALSE |
| PL | Qrfpr | gene expression | Qrfpr | 0.55 | 2473 | 0.54 | 8.1e-70 | 5.22 | 1.79e-07 | 0.51 | FALSE |
| PL | Atp11b | isoform ratio | XM_039103612.1 | 0.05 | 1 | 0.02 | 9.3e-04 | 5.34 | 9.25e-08 | 0.33 | FALSE |
| PL | Atp11b | isoform ratio | XM_039103616.1 | 0.05 | 1 | 0.03 | 1.7e-04 | -5.34 | 9.25e-08 | 0.42 | FALSE |
| PL | Mccc1 | isoform ratio | XM_039101989.1 | 0.09 | 1 | 0.07 | 3.6e-08 | -5.23 | 1.65e-07 | 0.51 | FALSE |
| PL | Qrfpr | mRNA stability | Qrfpr | 0.14 | 1 | 0.1 | 7.1e-11 | -5.43 | 5.67e-08 | 0.74 | FALSE |
| pVTA | Anxa5 | intron excision ratio | chr2_119326053_119327400 | 0.19 | 208 | 0.18 | 4.3e-08 | -5.39 | 7.07e-08 | 0.5 | FALSE |
| pVTA | Zfp267 | mRNA stability | Zfp267 | 0.67 | 11 | 0.46 | 6.5e-22 | -5.36 | 8.24e-08 | 0 | TRUE |