Best TWAS P=1.01e-07 · Best GWAS P=1.12e-08 conditioned to 3.31e-02
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Ankrd50 | mRNA stability | Ankrd50 | 0.08 | 1069 | 0.07 | 4.4e-08 | 5.31 | 1.08e-07 | 0.56 | FALSE |
Brain | Fat4 | gene expression | Fat4 | 0.03 | 1476 | 0.03 | 5.8e-04 | 5.32 | 1.01e-07 | 0.32 | TRUE |
LHb | Ankrd50 | gene expression | Ankrd50 | 0.2 | 1069 | 0.06 | 1.8e-02 | -5.25 | 1.53e-07 | 0.29 | FALSE |
Liver | Ankrd50 | alternative TSS | NM_001191606.1 | 0.09 | 1069 | 0.06 | 2.4e-07 | 5.19 | 2.14e-07 | 0.4 | FALSE |
Liver | Ankrd50 | alternative TSS | XM_008760922.3 | 0.09 | 1069 | 0.06 | 3.2e-07 | -5.22 | 1.76e-07 | 0.45 | FALSE |
NAcc | LOC120100575 | gene expression | LOC120100575 | 0.13 | 1 | 0.07 | 1.1e-08 | -5.25 | 1.53e-07 | 0.83 | FALSE |
PL | LOC120100575 | gene expression | LOC120100575 | 0.15 | 1 | 0.1 | 1.2e-10 | -5.24 | 1.60e-07 | 0.82 | FALSE |
pVTA | Ankrd50 | gene expression | Ankrd50 | 0.41 | 1069 | 0.2 | 3.2e-09 | -5.18 | 2.17e-07 | 0.52 | FALSE |