Best TWAS P=4.25e-09 · Best GWAS P=1.47e-08 conditioned to 1.18e-01
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Anxa5 | alternative TSS | ENSRNOT00000104744 | 0.07 | 1 | 0.05 | 3.1e-06 | -5.37 | 7.93e-08 | 0.37 | FALSE |
Adipose | Anxa5 | alternative TSS | ENSRNOT00000109811 | 0.06 | 1 | 0.03 | 2.7e-04 | -5.4 | 6.70e-08 | 0.07 | FALSE |
Adipose | Anxa5 | alternative TSS | ENSRNOT00000019554 | 0.15 | 1 | 0.12 | 1.6e-13 | 5.15 | 2.56e-07 | 0.22 | FALSE |
Adipose | Qrfpr | gene expression | ENSRNOG00000014414 | 0.2 | 1 | 0.1 | 1.2e-10 | -5.39 | 6.88e-08 | 0.41 | FALSE |
Adipose | ENSRNOG00000066024 | gene expression | ENSRNOG00000066024 | 0.04 | 1 | 0.02 | 9.6e-04 | 5.66 | 1.52e-08 | 0.05 | FALSE |
Adipose | Anxa5 | mRNA stability | ENSRNOG00000014453 | 0.07 | 1 | 0.04 | 4.3e-05 | -5.13 | 2.84e-07 | 0.06 | FALSE |
Adipose | Atp11b | mRNA stability | ENSRNOG00000052116 | 0.13 | 1833 | 0.06 | 1.8e-07 | 5.4 | 6.83e-08 | 0.64 | FALSE |
BLA | Qrfpr | gene expression | ENSRNOG00000014414 | 0.36 | 1 | 0.21 | 2.9e-11 | 5.39 | 6.94e-08 | 0.41 | FALSE |
Brain | Qrfpr | gene expression | ENSRNOG00000014414 | 0.67 | 239 | 0.64 | 1.0e-77 | 5.62 | 1.89e-08 | 0.56 | FALSE |
Brain | Trpc3 | isoform ratio | ENSRNOT00000046700 | 0.13 | 32 | 0.1 | 1.0e-09 | 5.1 | 3.46e-07 | 0.31 | FALSE |
Brain | Trpc3 | isoform ratio | ENSRNOT00000109104 | 0.05 | 1 | 0.04 | 2.5e-04 | -5.1 | 3.36e-07 | 0.05 | FALSE |
Brain | Trpc3 | intron excision ratio | chr2:119485307:119496374 | 0.03 | 2047 | 0.02 | 5.6e-03 | 5.32 | 1.06e-07 | 0.44 | FALSE |
Brain | Trpc3 | intron excision ratio | chr2:119485307:119499985 | 0.11 | 2047 | 0.09 | 1.8e-08 | -5.33 | 9.56e-08 | 0.36 | FALSE |
Brain | Trpc3 | intron excision ratio | chr2:119496457:119499985 | 0.03 | 1 | 0.02 | 5.2e-03 | 5.11 | 3.20e-07 | 0.03 | FALSE |
Brain | Qrfpr | mRNA stability | ENSRNOG00000014414 | 0.39 | 32 | 0.32 | 5.6e-30 | 5.87 | 4.25e-09 | 0.57 | TRUE |
IL | Qrfpr | gene expression | ENSRNOG00000014414 | 0.83 | 2467 | 0.31 | 3.5e-08 | 5.23 | 1.70e-07 | 0.55 | FALSE |
Liver | Dcun1d1 | alternative polyA | ENSRNOT00000068334 | 0.03 | 2146 | 0.01 | 6.0e-02 | -5.45 | 5.07e-08 | 0.28 | FALSE |
Liver | Dcun1d1 | gene expression | ENSRNOG00000012734 | 0.1 | 1 | 0.06 | 3.0e-07 | -5.66 | 1.52e-08 | 0.69 | FALSE |
Liver | Mccc1 | gene expression | ENSRNOG00000013293 | 0.33 | 2259 | 0.24 | 6.7e-26 | 5.42 | 5.92e-08 | 0.43 | FALSE |
Liver | Dcun1d1 | isoform ratio | ENSRNOT00000080100 | 0.03 | 2146 | 0 | 1.4e-01 | -5.57 | 2.58e-08 | 0.29 | FALSE |
Liver | Anxa5 | intron excision ratio | chr2:119326053:119327400 | 0.03 | 9 | 0.01 | 2.3e-02 | 5.34 | 9.54e-08 | 0.27 | FALSE |
Liver | Bbs7 | mRNA stability | ENSRNOG00000015816 | 0.09 | 1 | 0.06 | 9.2e-08 | 5.13 | 2.84e-07 | 0.26 | FALSE |
NAcc | Bbs7 | alternative TSS | ENSRNOT00000100665 | 0.04 | 1 | 0.03 | 5.5e-03 | -5.43 | 5.59e-08 | 0.04 | FALSE |
NAcc | Bbs7 | alternative TSS | ENSRNOT00000111410 | 0.05 | 1 | 0.03 | 5.6e-03 | -5.43 | 5.59e-08 | 0.04 | FALSE |
NAcc | AABR07010085.2 | gene expression | ENSRNOG00000056177 | 0.05 | 2308 | 0.03 | 3.7e-03 | -5.09 | 3.52e-07 | 0.33 | FALSE |
NAcc | Ccna2 | isoform ratio | ENSRNOT00000079745 | 0.05 | 1 | 0.02 | 1.2e-02 | 5.43 | 5.59e-08 | 0.04 | FALSE |
NAcc | Anxa5 | intron excision ratio | chr2:119326053:119327400 | 0.19 | 1 | 0.04 | 4.5e-04 | 5.35 | 8.84e-08 | 0.07 | FALSE |
OFC | Qrfpr | gene expression | ENSRNOG00000014414 | 0.85 | 1 | 0.41 | 5.7e-11 | 5.39 | 7.18e-08 | 0.38 | FALSE |
OFC | ENSRNOG00000067530 | isoform ratio | ENSRNOT00000101042 | 0.31 | 3 | 0.15 | 2.5e-04 | -5.17 | 2.32e-07 | 0.56 | FALSE |
OFC | ENSRNOG00000067530 | isoform ratio | ENSRNOT00000112310 | 0.37 | 3 | 0.21 | 1.1e-05 | 5.12 | 3.01e-07 | 0.67 | FALSE |
PL | Qrfpr | gene expression | ENSRNOG00000014414 | 0.59 | 47 | 0.56 | 2.5e-51 | 5.48 | 4.14e-08 | 0.56 | FALSE |
PL | Trpc3 | gene expression | ENSRNOG00000016070 | 0.42 | 12 | 0.31 | 2.3e-24 | -5.14 | 2.82e-07 | 0 | FALSE |
PL | Anxa5 | intron excision ratio | chr2:119326053:119327400 | 0.18 | 1 | 0.11 | 1.9e-08 | 5.15 | 2.56e-07 | 0.21 | FALSE |
PL | Qrfpr | mRNA stability | ENSRNOG00000014414 | 0.12 | 17 | 0.09 | 5.2e-07 | 5.45 | 4.92e-08 | 0.43 | FALSE |