chr2:117,887,529-120,309,104

Trait: Tibialis anterior weight

Best TWAS P=1.63e-08 · Best GWAS P=1.47e-08 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Qrfpr gene expression Qrfpr 0.26 8 0.14 2.2e-15 -5.3 1.14e-07 0.58 FALSE
BLA Qrfpr gene expression Qrfpr 0.36 1 0.21 2.2e-11 -5.39 6.94e-08 0.41 FALSE
Brain Dcun1d1 alternative polyA XM_006232262.4 0.11 2149 0.04 4.6e-05 -5.3 1.14e-07 0.54 FALSE
Brain Dcun1d1 alternative polyA XM_006232263.4 0.1 2149 0.04 4.6e-05 5.18 2.19e-07 0.54 FALSE
Brain Mccc1 alternative polyA XM_039101988.1 0.04 2263 0.03 1.3e-03 -5.6 2.20e-08 0.49 FALSE
Brain Mccc1 alternative polyA XM_039101989.1 0.04 2263 0.03 1.3e-03 5.59 2.24e-08 0.48 FALSE
Brain Qrfpr gene expression Qrfpr 0.7 50 0.64 1.5e-77 5.49 3.96e-08 0.57 FALSE
Brain Dcun1d1 isoform ratio XM_006232262.4 0.05 1 0.02 6.7e-03 5.36 8.39e-08 0.04 FALSE
Brain Mccc1 isoform ratio XM_039101989.1 0.04 2263 0.02 2.6e-03 5.57 2.57e-08 0.5 FALSE
Brain Trpc3 intron excision ratio chr2_119485307_119496374 0.04 1936 0.02 4.6e-03 5.32 1.03e-07 0.52 FALSE
Brain Trpc3 intron excision ratio chr2_119485307_119499985 0.13 1936 0.1 1.0e-09 -5.27 1.39e-07 0.42 FALSE
Brain Qrfpr mRNA stability Qrfpr 0.4 14 0.28 2.9e-26 5.53 3.14e-08 0.57 FALSE
Eye Dcun1d1 alternative TSS NM_001395100.1 0.34 1 0.13 5.7e-03 5.5 3.72e-08 0.06 FALSE
Liver Atp11b alternative polyA XM_039103613.1 0.04 6 0 1.4e-01 -5.48 4.23e-08 0.41 FALSE
Liver Atp11b alternative polyA XM_039103615.1 0.04 5 0.01 7.9e-02 5.49 4.12e-08 0.45 FALSE
Liver Atp11b alternative polyA XM_039103613.1 0.03 1 0 1.5e-01 -5.58 2.42e-08 0.03 FALSE
Liver Atp11b alternative polyA XM_039103615.1 0.04 48 0 9.3e-02 5.42 6.12e-08 0.42 FALSE
Liver Dcun1d1 gene expression Dcun1d1 0.1 2148 0.05 6.9e-06 -5.5 3.80e-08 0.54 FALSE
Liver Mccc1 gene expression Mccc1 0.35 2261 0.23 2.8e-25 5.35 8.76e-08 0.42 FALSE
Liver Anxa5 intron excision ratio chr2_119326053_119327400 0.03 1 0.01 2.3e-02 -5.49 3.98e-08 0.03 FALSE
Liver Anxa5 intron excision ratio chr2_119327513_119329846 0.03 1 -0 4.2e-01 5.49 3.98e-08 0.03 FALSE
Liver Bbs7 mRNA stability Bbs7 0.09 2085 0.06 1.9e-07 5.27 1.37e-07 0.33 FALSE
NAcc Mccc1 alternative polyA XM_039101988.1 0.03 1 0.01 1.1e-02 5.65 1.63e-08 0.04 TRUE
NAcc Mccc1 alternative polyA XM_039101989.1 0.03 1 0.01 1.2e-02 -5.65 1.63e-08 0.03 FALSE
NAcc Atp11b alternative TSS XM_039103613.1 0.05 1 0.01 1.6e-02 5.57 2.49e-08 0.03 FALSE
NAcc Atp11b alternative TSS XM_039103616.1 0.07 39 0.01 1.4e-02 -5.24 1.57e-07 0.32 FALSE
NAcc Bbs7 gene expression Bbs7 0.06 1 0.03 8.9e-05 5.42 5.95e-08 0.31 FALSE
NAcc Atp11b isoform ratio XM_039103616.1 0.04 48 0.01 2.4e-02 -5.57 2.52e-08 0.46 FALSE
NAcc Mccc1 isoform ratio XM_039101989.1 0.04 1 0.01 6.5e-03 -5.39 6.94e-08 0.03 FALSE
NAcc Anxa5 intron excision ratio chr2_119326053_119327400 0.14 2372 0.1 4.4e-12 5.29 1.20e-07 0.24 FALSE
OFC Qrfpr gene expression Qrfpr 0.82 1 0.41 8.4e-11 -5.46 4.77e-08 0.48 FALSE
PL Mccc1 alternative polyA XM_039101988.1 0.08 1 0.06 1.3e-07 5.39 6.86e-08 0.36 FALSE
PL Mccc1 alternative polyA XM_039101989.1 0.08 1 0.06 1.1e-07 -5.39 6.86e-08 0.36 FALSE
PL Atp11b alternative TSS XM_039103613.1 0.04 1834 0.02 3.9e-03 -5.21 1.84e-07 0.59 FALSE
PL Atp11b alternative TSS XM_039103616.1 0.04 1 0.02 6.6e-03 -5.56 2.71e-08 0.04 FALSE
PL Qrfpr gene expression Qrfpr 0.55 2473 0.54 8.1e-70 5.53 3.15e-08 0.6 FALSE
PL Atp11b isoform ratio XM_039103612.1 0.05 1 0.02 9.3e-04 5.56 2.71e-08 0.13 FALSE
PL Atp11b isoform ratio XM_039103616.1 0.05 1 0.03 1.7e-04 -5.56 2.71e-08 0.17 FALSE
PL Mccc1 isoform ratio XM_039101989.1 0.09 1 0.07 3.6e-08 -5.39 6.86e-08 0.36 FALSE
PL Anxa5 intron excision ratio chr2_119326053_119327400 0.32 1 0.15 7.5e-16 -5.37 7.93e-08 0.45 FALSE
PL Qrfpr mRNA stability Qrfpr 0.14 1 0.1 7.1e-11 -5.43 5.57e-08 0.46 FALSE
pVTA Anxa5 intron excision ratio chr2_119326053_119327400 0.19 208 0.18 4.3e-08 -5.47 4.55e-08 0.42 FALSE