Best TWAS P=2.66e-08 · Best GWAS P=2.66e-07 conditioned to 5.38e-01
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | RGD1359508 | alternative polyA | ENSRNOT00000058366 | 0.76 | 6 | 0.18 | 8.3e-20 | -5.13 | 2.85e-07 | 0.99 | FALSE |
Adipose | RGD1359508 | alternative polyA | ENSRNOT00000114451 | 0.76 | 15 | 0.18 | 4.4e-20 | 5.11 | 3.16e-07 | 0.99 | FALSE |
Brain | Jade1 | alternative polyA | ENSRNOT00000018872 | 0.2 | 116 | 0.09 | 1.3e-08 | 5.41 | 6.21e-08 | 0.91 | FALSE |
Brain | Jade1 | alternative polyA | ENSRNOT00000100298 | 0.2 | 115 | 0.09 | 1.5e-08 | -5.41 | 6.16e-08 | 0.91 | FALSE |
Brain | Larp1b | alternative TSS | ENSRNOT00000044804 | 0.06 | 31 | 0.03 | 3.7e-04 | 5.44 | 5.23e-08 | 0.61 | FALSE |
Brain | NEWGENE_1309446 | gene expression | ENSRNOG00000010556 | 0.07 | 26 | 0.06 | 2.9e-06 | 5.28 | 1.31e-07 | 0.58 | FALSE |
Brain | Jade1 | isoform ratio | ENSRNOT00000018872 | 0.08 | 39 | 0.01 | 3.0e-02 | 5.23 | 1.71e-07 | 0.27 | FALSE |
Brain | Jade1 | isoform ratio | ENSRNOT00000100298 | 0.22 | 107 | 0.09 | 9.3e-09 | -5.31 | 1.09e-07 | 0.91 | FALSE |
Brain | Larp1b | isoform ratio | ENSRNOT00000044804 | 0.09 | 36 | 0.05 | 1.2e-05 | 5.56 | 2.66e-08 | 0.68 | TRUE |
Liver | RGD1359508 | alternative polyA | ENSRNOT00000114451 | 0.79 | 12 | 0.07 | 1.9e-08 | 5.1 | 3.31e-07 | 0.99 | FALSE |
Liver | RGD1565989 | gene expression | ENSRNOG00000013940 | 0.09 | 37 | 0.02 | 1.1e-03 | -5.29 | 1.23e-07 | 0.56 | FALSE |