Best TWAS P=1.60e-07 · Best GWAS P=1.55e-07 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Nucb2 | alternative TSS | ENSRNOT00000107803 | 0.04 | 2 | 0.03 | 2.8e-04 | -5.1 | 3.43e-07 | 0.44 | FALSE |
Adipose | Pik3c2a | mRNA stability | ENSRNOG00000020479 | 0.1 | 1 | 0.06 | 6.4e-07 | 5.16 | 2.44e-07 | 0.63 | FALSE |
Adipose | RGD1311703 | mRNA stability | ENSRNOG00000053659 | 0.07 | 758 | 0.04 | 2.5e-05 | 5.14 | 2.80e-07 | 0.58 | FALSE |
BLA | Plekha7 | gene expression | ENSRNOG00000024602 | 0.42 | 26 | 0.17 | 3.5e-09 | -5.09 | 3.56e-07 | 0.58 | FALSE |
BLA | Rps13 | isoform ratio | ENSRNOT00000118821 | 0.05 | 24 | 0.04 | 4.0e-03 | -5.15 | 2.59e-07 | 0.4 | FALSE |
Brain | Plekha7 | alternative TSS | ENSRNOT00000110407 | 0.03 | 1 | 0.02 | 5.5e-03 | -5.11 | 3.16e-07 | 0.04 | FALSE |
Brain | RGD1311703 | gene expression | ENSRNOG00000053659 | 0.08 | 758 | 0.05 | 1.3e-05 | 5.11 | 3.18e-07 | 0.57 | FALSE |
Liver | Nucb2 | isoform ratio | ENSRNOT00000027752 | 0.03 | 1 | 0.02 | 6.1e-03 | 5.16 | 2.48e-07 | 0.04 | FALSE |
Liver | Nucb2 | isoform ratio | ENSRNOT00000107803 | 0.03 | 1 | 0.01 | 1.5e-02 | -5.16 | 2.48e-07 | 0.03 | FALSE |
Liver | Nucb2 | intron excision ratio | chr1:170756101:170769341 | 0.04 | 1 | 0.02 | 4.7e-03 | 5.15 | 2.54e-07 | 0.04 | FALSE |
Liver | Sox6 | intron excision ratio | chr1:169943000:170010640 | 0.2 | 1 | 0.01 | 2.2e-02 | 5.17 | 2.40e-07 | 0.03 | FALSE |
NAcc | RGD1311703 | alternative polyA | ENSRNOT00000099493 | 0.05 | 168 | 0.04 | 8.4e-04 | -5.18 | 2.19e-07 | 0.52 | FALSE |
NAcc | RGD1311703 | gene expression | ENSRNOG00000053659 | 0.1 | 13 | 0.08 | 9.4e-07 | 5.24 | 1.60e-07 | 0.57 | TRUE |
PL | Plekha7 | gene expression | ENSRNOG00000024602 | 0.04 | 907 | 0.03 | 2.3e-03 | -5.09 | 3.51e-07 | 0.48 | FALSE |