Best TWAS P=4.74e-08 · Best GWAS P=1.86e-07 conditioned to 4.10e-01
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Sec31a | isoform ratio | XM_039092523.1 | 0.07 | 5 | 0.04 | 1.8e-05 | 5.29 | 1.21e-07 | 0.68 | FALSE |
| Brain | Lin54 | alternative TSS | XM_006250659.4 | 0.08 | 3231 | 0.07 | 5.5e-07 | 5.27 | 1.38e-07 | 0.66 | FALSE |
| NAcc | Lin54 | mRNA stability | Lin54 | 0.03 | 3231 | 0.01 | 5.7e-03 | -5.46 | 4.74e-08 | 0.55 | TRUE |
| PL | LOC100911553 | mRNA stability | LOC100911553 | 0.03 | 3190 | 0.03 | 4.6e-04 | 5.4 | 6.71e-08 | 0.67 | FALSE |
| pVTA | Lin54 | alternative TSS | XM_006250659.4 | 0.07 | 3231 | 0.02 | 3.1e-02 | 5.18 | 2.19e-07 | 0.2 | FALSE |