chr15:43,349,498-46,640,839

Trait: Extensor digitorum longus weight

Best TWAS P=2.31e-13 · Best GWAS P=5.45e-13 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Pdlim2 gene expression ENSRNOG00000008543 0.04 172 0.02 9.3e-04 7.15 8.66e-13 0.57 FALSE
Adipose Piwil2 gene expression ENSRNOG00000009871 0.04 1 0.02 3.1e-03 7.05 1.75e-12 0.04 FALSE
Adipose Polr3d gene expression ENSRNOG00000010028 0.07 246 0.06 8.3e-07 -7.09 1.31e-12 0.63 FALSE
Adipose Bmp1 gene expression ENSRNOG00000010890 0.05 1 0.05 1.1e-06 -7.09 1.35e-12 0.61 FALSE
Adipose Fhip2b gene expression ENSRNOG00000012014 0.02 12 0.01 2.8e-02 7.08 1.44e-12 0.56 FALSE
Adipose Dmtn gene expression ENSRNOG00000012273 0.17 1 0.2 1.7e-21 7.09 1.37e-12 0.67 FALSE
Adipose Slc25a37 gene expression ENSRNOG00000015495 0.02 52 0.01 8.5e-03 7.05 1.76e-12 0.48 FALSE
Adipose Loxl2 gene expression ENSRNOG00000016758 0.02 1 0.01 1.9e-02 7.1 1.25e-12 0.03 FALSE
Adipose R3hcc1 gene expression ENSRNOG00000016777 0.15 1 0.09 8.5e-10 -7.09 1.35e-12 0.7 FALSE
Adipose Chmp7 gene expression ENSRNOG00000016939 0.38 263 0.35 9.9e-40 7.08 1.45e-12 0.69 FALSE
Adipose Rhobtb2 gene expression ENSRNOG00000017373 0.36 182 0.33 1.9e-37 7.12 1.07e-12 0.67 FALSE
Adipose Tnfrsf10b gene expression ENSRNOG00000038483 0.16 1 0.14 1.7e-15 7.06 1.71e-12 0.62 FALSE
Adipose Fhip2b isoform ratio ENSRNOT00000097198 0.02 1 0.01 3.6e-02 7.09 1.37e-12 0.04 FALSE
Adipose Bin3 isoform ratio ENSRNOT00000024614 0.06 214 0.05 4.2e-06 7.14 9.08e-13 0.59 FALSE
Adipose Bin3 isoform ratio ENSRNOT00000099631 0.07 174 0.05 1.2e-06 -7.14 9.01e-13 0.59 FALSE
Adipose Hr mRNA stability ENSRNOG00000011427 0.02 649 0.02 3.3e-03 -7.04 1.86e-12 0.46 FALSE
Adipose Dok2 mRNA stability ENSRNOG00000013922 0.04 755 0.01 1.7e-02 5.32 1.03e-07 0.39 FALSE
Adipose R3hcc1 mRNA stability ENSRNOG00000016777 0.28 1 0.17 1.7e-18 -7.09 1.35e-12 0.7 FALSE
BLA Ppp3cc alternative polyA ENSRNOT00000082505 0.07 639 0.03 1.6e-02 7.08 1.41e-12 0.42 FALSE
BLA Ppp3cc alternative polyA ENSRNOT00000091826 0.07 639 0.02 1.9e-02 -7.08 1.40e-12 0.41 FALSE
BLA Sorbs3 alternative TSS ENSRNOT00000012056 0.12 711 0.06 4.5e-04 -7.08 1.40e-12 0.55 FALSE
BLA Sorbs3 alternative TSS ENSRNOT00000113720 0.12 711 0.06 5.1e-04 7.08 1.40e-12 0.55 FALSE
BLA Sorbs3 gene expression ENSRNOG00000008829 0.07 1 0.04 3.5e-03 -7.04 1.87e-12 0.04 FALSE
BLA Ppp3cc gene expression ENSRNOG00000009745 0.51 639 0.31 6.4e-17 7.09 1.35e-12 0.61 FALSE
BLA Polr3d gene expression ENSRNOG00000010028 0.11 588 0.03 1.2e-02 -7.08 1.44e-12 0.58 FALSE
BLA Lgi3 gene expression ENSRNOG00000011323 0.14 161 0.08 3.1e-05 -6.9 5.18e-12 0.65 TRUE
BLA Dmtn gene expression ENSRNOG00000012273 0.24 1 0.21 1.8e-11 -7.18 7.11e-13 0.8 FALSE
BLA R3hcc1 gene expression ENSRNOG00000016777 0.15 136 0.08 4.0e-05 7.11 1.16e-12 0.69 FALSE
BLA Rhobtb2 gene expression ENSRNOG00000017373 0.18 528 0.08 4.5e-05 7.08 1.40e-12 0.65 FALSE
BLA Ccar2 gene expression ENSRNOG00000018295 0.11 1 0.06 4.0e-04 7.18 7.11e-13 0.08 FALSE
BLA Phyhip intron excision ratio chr15:45535048:45538056 0.08 572 0.04 5.0e-03 -7.08 1.46e-12 0.46 FALSE
BLA Dmtn intron excision ratio chr15:45694169:45704328 0.05 1 0.02 3.2e-02 -7 2.65e-12 0.04 FALSE
BLA Ppp3cc mRNA stability ENSRNOG00000009745 0.08 1 0.04 4.0e-03 7.18 7.11e-13 0.05 FALSE
BLA Phyhip mRNA stability ENSRNOG00000010555 0.07 1 0.05 1.8e-03 7.18 7.11e-13 0.05 FALSE
Brain Ppp3cc alternative TSS ENSRNOT00000091826 0.06 1 0.04 1.4e-04 7.18 7.11e-13 0.32 FALSE
Brain Ppp3cc alternative TSS ENSRNOT00000100817 0.07 1 0.05 8.4e-06 -7.18 7.11e-13 0.57 FALSE
Brain Ppp3cc alternative TSS ENSRNOT00000082505 0.08 1 0.06 1.5e-06 7.18 7.11e-13 0.64 FALSE
Brain Ppp3cc alternative TSS ENSRNOT00000100817 0.08 1 0.06 2.0e-06 -7.18 7.11e-13 0.59 FALSE
Brain Rhobtb2 alternative TSS ENSRNOT00000117351 0.03 1 0.01 2.7e-02 7.04 1.91e-12 0.04 FALSE
Brain Rhobtb2 alternative TSS ENSRNOT00000023876 0.03 1 0.01 3.8e-02 -7.04 1.91e-12 0.03 FALSE
Brain Rhobtb2 alternative TSS ENSRNOT00000117351 0.03 1 0.01 2.9e-02 7.04 1.91e-12 0.04 FALSE
Brain Sorbs3 gene expression ENSRNOG00000008829 0.16 118 0.13 5.3e-12 -7.33 2.31e-13 0.58 TRUE
Brain Ppp3cc gene expression ENSRNOG00000009745 0.4 13 0.34 1.3e-32 7.24 4.43e-13 0.61 FALSE
Brain Slc39a14 gene expression ENSRNOG00000009832 0.05 1 0.04 1.1e-04 -7.09 1.31e-12 0.07 FALSE
Brain Polr3d gene expression ENSRNOG00000010028 0.17 588 0.13 2.1e-12 -7.09 1.31e-12 0.63 FALSE
Brain Bmp1 gene expression ENSRNOG00000010890 0.19 634 0.22 4.3e-20 7.11 1.13e-12 0.65 FALSE
Brain Lgi3 gene expression ENSRNOG00000011323 0.1 1 0.1 6.4e-10 -7.09 1.35e-12 0.66 FALSE
Brain Hr gene expression ENSRNOG00000011427 0.02 1 0.02 8.0e-03 -7.09 1.35e-12 0.04 FALSE
Brain Nudt18 gene expression ENSRNOG00000011831 0.13 79 0.06 2.5e-06 -7.18 6.76e-13 0.64 FALSE
Brain Dmtn gene expression ENSRNOG00000012273 0.15 172 0.18 1.9e-16 -7 2.47e-12 0.66 FALSE
Brain Entpd4 gene expression ENSRNOG00000016321 0.07 332 0.05 3.7e-05 -7.11 1.15e-12 0.75 FALSE
Brain R3hcc1 gene expression ENSRNOG00000016777 0.09 436 0.07 6.3e-07 6.32 2.57e-10 0.7 TRUE
Brain Chmp7 gene expression ENSRNOG00000016939 0.04 1 0.03 1.9e-03 -7.14 9.57e-13 0.05 FALSE
Brain Rhobtb2 gene expression ENSRNOG00000017373 0.31 528 0.26 1.6e-24 7.09 1.37e-12 0.65 FALSE
Brain Egr3 gene expression ENSRNOG00000017828 0.04 13 0.03 1.8e-03 -7.2 5.83e-13 0.54 TRUE
Brain Ccar2 gene expression ENSRNOG00000018295 0.15 722 0.12 1.6e-11 7.1 1.29e-12 0.58 FALSE
Brain Tnfrsf10b gene expression ENSRNOG00000038483 0.26 479 0.22 8.9e-20 7.08 1.48e-12 0.68 FALSE
Brain Dmtn isoform ratio ENSRNOT00000106565 0.04 1 0.03 5.6e-04 7.13 1.02e-12 0.06 FALSE
Brain Egr3 isoform ratio ENSRNOT00000116948 0.03 15 0.02 2.7e-03 6.91 4.76e-12 0.48 FALSE
Brain Bin3 isoform ratio ENSRNOT00000024614 0.08 14 0.07 8.4e-07 7.14 9.57e-13 0.58 FALSE
Brain Bin3 isoform ratio ENSRNOT00000099631 0.08 1 0.07 5.8e-07 -7.14 9.57e-13 0.56 FALSE
Brain Ppp3cc intron excision ratio chr15:45297492:45298385 0.03 1 0.02 5.2e-03 -7.09 1.31e-12 0.04 FALSE
Brain Dmtn intron excision ratio chr15:45679395:45679904 0.08 685 0.06 3.2e-06 7.03 2.04e-12 0.66 FALSE
Brain Dmtn intron excision ratio chr15:45693188:45694000 0.04 1 0.04 4.8e-05 -7 2.65e-12 0.09 FALSE
Brain Dmtn intron excision ratio chr15:45693794:45694000 0.03 1 0.02 3.2e-03 7.18 7.11e-13 0.07 FALSE
Brain Dmtn intron excision ratio chr15:45694169:45702131 0.04 685 0.04 1.4e-04 6.22 4.96e-10 0.64 FALSE
Brain Dmtn intron excision ratio chr15:45694169:45704328 0.08 685 0.08 4.6e-08 -6.71 1.91e-11 0.66 FALSE
Brain Dmtn intron excision ratio chr15:45702261:45704328 0.06 1 0.08 8.7e-08 7.18 7.11e-13 0.78 FALSE
Brain Ppp3cc mRNA stability ENSRNOG00000009745 0.4 639 0.33 2.7e-31 7.08 1.42e-12 0.61 FALSE
Brain Slc39a14 mRNA stability ENSRNOG00000009832 0.07 612 0.06 5.3e-06 -7.07 1.51e-12 0.62 FALSE
Brain R3hcc1 mRNA stability ENSRNOG00000016777 0.08 436 0.06 3.0e-06 7.08 1.48e-12 0.7 FALSE
Brain Chmp7 mRNA stability ENSRNOG00000016939 0.05 1 0.04 7.7e-05 -7.04 1.91e-12 0.08 FALSE
Brain Bin3 mRNA stability ENSRNOG00000018023 0.05 1 0.04 1.2e-04 7.05 1.77e-12 0.06 FALSE
Brain Ccar2 mRNA stability ENSRNOG00000018295 0.04 722 0.03 1.4e-03 7.09 1.34e-12 0.53 FALSE
Eye Phyhip gene expression ENSRNOG00000010555 0.77 572 0.52 1.2e-09 -7.07 1.54e-12 0.63 FALSE
Eye Tnfrsf10b gene expression ENSRNOG00000038483 0.37 180 0.25 8.7e-05 7.12 1.08e-12 0.58 FALSE
IL Ppp3cc gene expression ENSRNOG00000009745 0.54 638 0.28 1.7e-07 7.08 1.42e-12 0.61 FALSE
IL Dmtn gene expression ENSRNOG00000012273 0.23 1 0.1 1.9e-03 -7.09 1.32e-12 0.07 FALSE
IL Rhobtb2 gene expression ENSRNOG00000017373 0.24 1 0.11 1.6e-03 7.07 1.54e-12 0.47 FALSE
IL ENSRNOG00000067974 gene expression ENSRNOG00000067974 0.2 330 0.06 1.2e-02 7.11 1.13e-12 0.44 FALSE
IL Ppp3cc mRNA stability ENSRNOG00000009745 0.33 1 0.13 6.3e-04 7.11 1.16e-12 0.07 FALSE
IL Bin3 mRNA stability ENSRNOG00000018023 0.16 713 0.05 2.9e-02 7.09 1.38e-12 0.29 FALSE
LHb Sorbs3 gene expression ENSRNOG00000008829 0.22 707 0.11 1.5e-03 -7.09 1.36e-12 0.45 FALSE
LHb Ppp3cc gene expression ENSRNOG00000009745 0.37 637 0.22 7.1e-06 7.09 1.38e-12 0.6 FALSE
LHb Phyhip gene expression ENSRNOG00000010555 0.52 3 0.31 3.9e-08 7.09 1.30e-12 0.64 TRUE
LHb Tnfrsf10b gene expression ENSRNOG00000038483 0.52 1 0.26 8.1e-07 7.08 1.42e-12 0.19 FALSE
LHb Ppp3cc mRNA stability ENSRNOG00000009745 0.28 637 0.12 8.4e-04 7.08 1.41e-12 0.51 FALSE
LHb Loxl2 mRNA stability ENSRNOG00000016758 0.16 1 0.08 7.0e-03 -7.07 1.54e-12 0.33 FALSE
Liver R3hcc1 alternative TSS ENSRNOT00000022706 0.11 1 0.09 7.3e-10 7.06 1.66e-12 0.65 FALSE
Liver R3hcc1 alternative TSS ENSRNOT00000101142 0.11 107 0.09 5.6e-10 -7.11 1.14e-12 0.7 FALSE
Liver Pdlim2 gene expression ENSRNOG00000008543 0.02 271 0.02 3.5e-03 -7.09 1.31e-12 0.45 FALSE
Liver Ppp3cc gene expression ENSRNOG00000009745 0.02 1 0.01 8.0e-03 -7.12 1.04e-12 0.03 FALSE
Liver Slc39a14 gene expression ENSRNOG00000009832 0.03 611 0.03 5.2e-04 7.08 1.40e-12 0.58 FALSE
Liver Polr3d gene expression ENSRNOG00000010028 0.08 97 0.06 5.6e-07 -7.09 1.32e-12 0.63 FALSE
Liver Bmp1 gene expression ENSRNOG00000010890 0.1 1 0.13 3.7e-14 7.09 1.32e-12 0.67 FALSE
Liver Fgf17 gene expression ENSRNOG00000012912 0.02 697 0.01 1.7e-02 -6.67 2.51e-11 0.48 FALSE
Liver R3hcc1 gene expression ENSRNOG00000016777 0.43 1 0.38 4.3e-44 -7.06 1.66e-12 0.65 FALSE
Liver Rhobtb2 gene expression ENSRNOG00000017373 0.04 1 0.03 1.8e-04 7.01 2.39e-12 0.06 FALSE
Liver Tnfrsf10b gene expression ENSRNOG00000038483 0.05 1 0.03 1.3e-04 -7.08 1.42e-12 0.16 FALSE
Liver ENSRNOG00000067366 gene expression ENSRNOG00000067366 0.03 1 0.02 2.0e-03 -7.11 1.13e-12 0.08 FALSE
Liver Sorbs3 intron excision ratio chr15:45263517:45263631 0.03 478 0.02 1.5e-03 -7.12 1.06e-12 0.54 FALSE
Liver Sorbs3 intron excision ratio chr15:45263517:45264017 0.03 478 0.03 6.6e-04 7.12 1.05e-12 0.56 FALSE
Liver Slc39a14 mRNA stability ENSRNOG00000009832 0.02 611 0.02 4.0e-03 -7.08 1.45e-12 0.45 FALSE
Liver R3hcc1 mRNA stability ENSRNOG00000016777 0.11 107 0.09 2.8e-10 -7.11 1.14e-12 0.71 FALSE
Liver Bin3 mRNA stability ENSRNOG00000018023 0.17 61 0.16 6.5e-17 7.05 1.75e-12 0.59 FALSE
NAcc Ppp3cc gene expression ENSRNOG00000009745 0.37 18 0.26 3.8e-19 7.12 1.04e-12 0.61 FALSE
NAcc Nudt18 gene expression ENSRNOG00000011831 0.16 7 0.06 2.1e-05 -7.04 1.87e-12 0.66 TRUE
NAcc Dmtn gene expression ENSRNOG00000012273 0.11 120 0.1 3.3e-08 -6.44 1.23e-10 0.66 FALSE
NAcc R3hcc1 gene expression ENSRNOG00000016777 0.07 436 0.05 1.7e-04 7.09 1.37e-12 0.67 FALSE
NAcc Rhobtb2 gene expression ENSRNOG00000017373 0.11 430 0.07 5.7e-06 7.16 8.00e-13 0.65 FALSE
NAcc Ccar2 gene expression ENSRNOG00000018295 0.08 722 0.05 8.1e-05 7.09 1.35e-12 0.57 FALSE
NAcc Tnfrsf10b gene expression ENSRNOG00000038483 0.12 1 0.07 3.2e-06 7.08 1.44e-12 0.57 FALSE
NAcc Egr3 isoform ratio ENSRNOT00000116948 0.06 709 0.03 4.1e-03 7.09 1.36e-12 0.52 FALSE
NAcc Fhip2b intron excision ratio chr15:45658567:45658743 0.04 650 0 1.9e-01 -7.07 1.58e-12 0.4 FALSE
NAcc ENSRNOG00000067974 intron excision ratio chr15:44603231:44603574 0.04 330 0.01 4.4e-02 -7.11 1.13e-12 0.43 FALSE
NAcc Ppp3cc mRNA stability ENSRNOG00000009745 0.06 639 0.03 1.9e-03 7.08 1.41e-12 0.58 FALSE
NAcc R3hcc1 mRNA stability ENSRNOG00000016777 0.04 61 0.03 1.6e-03 7.15 8.60e-13 0.43 FALSE
NAcc Bin3 mRNA stability ENSRNOG00000018023 0.04 1 0.04 4.6e-04 7.18 7.11e-13 0.06 FALSE
OFC Ppp3cc gene expression ENSRNOG00000009745 0.45 1 0.15 1.8e-04 7.09 1.37e-12 0.12 FALSE
OFC Polr3d gene expression ENSRNOG00000010028 0.26 1 0.12 9.0e-04 -7.09 1.32e-12 0.06 FALSE
OFC Lgi3 gene expression ENSRNOG00000011323 0.28 643 0.01 2.1e-01 -6.96 3.47e-12 0.3 FALSE
OFC Nudt18 gene expression ENSRNOG00000011831 0.27 1 0.07 1.1e-02 -7.11 1.16e-12 0.06 FALSE
OFC Dmtn gene expression ENSRNOG00000012273 0.14 1 0.07 7.8e-03 -7.11 1.16e-12 0.06 FALSE
OFC Dok2 gene expression ENSRNOG00000013922 0.15 1 0.08 7.1e-03 7.11 1.16e-12 0.06 FALSE
OFC Rhobtb2 gene expression ENSRNOG00000017373 0.25 1 0.12 7.9e-04 7.09 1.37e-12 0.06 FALSE
OFC Ccar2 gene expression ENSRNOG00000018295 0.26 721 0.13 5.1e-04 7.09 1.35e-12 0.47 FALSE
OFC Tnfrsf10b gene expression ENSRNOG00000038483 0.23 1 0.08 7.0e-03 7.09 1.32e-12 0.06 FALSE
OFC Dmtn intron excision ratio chr15:45679395:45679904 0.11 1 0.13 6.2e-04 7.07 1.59e-12 0.06 FALSE
OFC Ppp3cc mRNA stability ENSRNOG00000009745 0.17 638 0.09 3.2e-03 7.08 1.40e-12 0.42 FALSE
OFC Bin3 mRNA stability ENSRNOG00000018023 0.27 4 0.14 3.2e-04 6.95 3.58e-12 0.53 FALSE
PL Sorbs3 alternative TSS ENSRNOT00000012056 0.04 711 0.02 1.9e-02 -7.09 1.38e-12 0.38 FALSE
PL Sorbs3 alternative TSS ENSRNOT00000113720 0.04 711 0.02 1.4e-02 7.09 1.38e-12 0.42 FALSE
PL Ppp3cc alternative TSS ENSRNOT00000100817 0.07 1 0.04 6.1e-04 -7.11 1.16e-12 0.06 FALSE
PL Ppp3cc alternative TSS ENSRNOT00000100817 0.09 1 0.07 6.7e-06 -7.11 1.16e-12 0.24 FALSE
PL Dok2 alternative TSS ENSRNOT00000103496 0.04 756 0.02 1.6e-02 -7.06 1.64e-12 0.49 FALSE
PL Dok2 alternative TSS ENSRNOT00000119823 0.04 756 0.01 2.2e-02 7.06 1.72e-12 0.46 FALSE
PL Gfra2 alternative TSS ENSRNOT00000096485 0.04 1 0.02 5.5e-03 -7.24 4.56e-13 0.07 FALSE
PL Gfra2 alternative TSS ENSRNOT00000019222 0.04 1 0.03 3.4e-03 7.24 4.56e-13 0.06 FALSE
PL Gfra2 alternative TSS ENSRNOT00000096485 0.04 1 0.02 6.3e-03 -7.24 4.56e-13 0.07 FALSE
PL Ppp3cc gene expression ENSRNOG00000009745 0.55 408 0.41 1.1e-33 7.14 9.12e-13 0.61 FALSE
PL Slc39a14 gene expression ENSRNOG00000009832 0.11 1 0.08 1.5e-06 -7.05 1.75e-12 0.38 FALSE
PL Polr3d gene expression ENSRNOG00000010028 0.06 588 0.04 4.6e-04 -7.08 1.45e-12 0.58 FALSE
PL Lgi3 gene expression ENSRNOG00000011323 0.05 645 0.04 4.1e-04 -7.1 1.25e-12 0.63 FALSE
PL Nudt18 gene expression ENSRNOG00000011831 0.15 658 0.09 3.5e-07 -6.95 3.60e-12 0.67 FALSE
PL Dmtn gene expression ENSRNOG00000012273 0.13 25 0.13 6.1e-10 -6.99 2.76e-12 0.66 FALSE
PL Entpd4 gene expression ENSRNOG00000016321 0.06 118 0.03 2.0e-03 -7.08 1.42e-12 0.71 FALSE
PL R3hcc1 gene expression ENSRNOG00000016777 0.14 436 0.09 1.8e-07 7.09 1.37e-12 0.7 FALSE
PL Rhobtb2 gene expression ENSRNOG00000017373 0.34 1 0.26 1.4e-19 7.04 1.87e-12 0.58 FALSE
PL Ccar2 gene expression ENSRNOG00000018295 0.1 1 0.07 3.4e-06 7.09 1.31e-12 0.38 FALSE
PL Tnfrsf10b gene expression ENSRNOG00000038483 0.09 1 0.07 9.3e-06 7.04 1.87e-12 0.18 FALSE
PL Ppp3cc intron excision ratio chr15:45297492:45309209 0.05 1 0.03 2.0e-03 7.11 1.16e-12 0.04 FALSE
PL Slc39a14 intron excision ratio chr15:45403531:45423398 0.04 1 0.02 8.5e-03 -7.18 7.11e-13 0.04 FALSE
PL Phyhip intron excision ratio chr15:45535048:45538056 0.04 1 0.01 4.2e-02 -7.11 1.16e-12 0.04 FALSE
PL Dmtn intron excision ratio chr15:45679395:45679904 0.05 685 0.02 1.8e-02 6.85 7.58e-12 0.41 FALSE
PL Dmtn intron excision ratio chr15:45702261:45704328 0.04 685 0.03 2.2e-03 6.78 1.24e-11 0.59 FALSE
PL Ppp3cc mRNA stability ENSRNOG00000009745 0.21 639 0.14 4.3e-11 7.08 1.40e-12 0.61 FALSE
PL Slc39a14 mRNA stability ENSRNOG00000009832 0.04 1 0.03 2.3e-03 -7.18 7.11e-13 0.05 FALSE
PL Bin3 mRNA stability ENSRNOG00000018023 0.05 131 0.03 2.7e-03 7.12 1.04e-12 0.51 FALSE