Best TWAS P=7.89e-08 · Best GWAS P=1.74e-07 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Acbd4 | alternative polyA | XM_039086115.1 | 0.48 | 151 | 0.43 | 1.0e-51 | -5.2 | 1.96e-07 | 0.78 | FALSE |
Adipose | Acbd4 | alternative polyA | XM_039086115.1 | 0.48 | 137 | 0.43 | 7.1e-52 | -5.21 | 1.84e-07 | 0.78 | FALSE |
Adipose | Fmnl1 | gene expression | Fmnl1 | 0.22 | 1 | 0.18 | 6.7e-20 | 5.2 | 2.04e-07 | 0.81 | FALSE |
Adipose | Fmnl1 | mRNA stability | Fmnl1 | 0.1 | 2223 | 0.08 | 2.1e-09 | -5.18 | 2.17e-07 | 0.74 | FALSE |
BLA | Mapt | isoform ratio | NM_017212.3 | 0.14 | 8 | 0.08 | 5.4e-05 | -5.22 | 1.79e-07 | 0.65 | FALSE |
BLA | Acbd4 | intron excision ratio | chr10_88050047_88050475 | 0.18 | 106 | 0.1 | 7.6e-06 | 5.37 | 7.89e-08 | 0.68 | TRUE |
Brain | Plekhm1 | alternative polyA | XM_039086121.1 | 0.05 | 2274 | 0.01 | 1.9e-02 | 5.3 | 1.17e-07 | 0.54 | FALSE |
Brain | Plekhm1 | alternative polyA | NM_001009677.2 | 0.04 | 2274 | 0.01 | 2.6e-02 | -5.32 | 1.03e-07 | 0.55 | FALSE |
Brain | Plekhm1 | alternative polyA | XM_039086121.1 | 0.04 | 2274 | 0.01 | 2.2e-02 | 5.32 | 1.02e-07 | 0.56 | FALSE |
Brain | Plekhm1 | isoform ratio | NM_001009677.2 | 0.03 | 2274 | 0.01 | 1.8e-02 | -5.27 | 1.34e-07 | 0.49 | FALSE |
LHb | Acbd4 | isoform ratio | XM_006247509.4 | 0.45 | 207 | 0.24 | 2.4e-06 | 5.2 | 1.98e-07 | 0.73 | FALSE |
OFC | Arhgap27 | gene expression | Arhgap27 | 0.15 | 2313 | 0.06 | 2.0e-02 | -5.34 | 9.51e-08 | 0.34 | FALSE |