chr6:56,652,686-59,315,568

Trait: Tibialis anterior weight

Best TWAS P = 6.32e-09 · Best GWAS P= 4.44e-08 conditioned to 1.38e-02

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Agr2 gene expression Agr2 0.08 2900 0.06 3.4e-07 -5.33 9.83e-08 0.21 FALSE
BLA Ankmy2 gene expression Ankmy2 0.1 65 0.05 9.2e-04 5.37 7.70e-08 0.45 FALSE
Brain Hdac9 alternative polyA XM_063262503.1 0.1 34 0.07 2.8e-07 -5.27 1.34e-07 0.73 TRUE
Brain Ankmy2 mRNA stability Ankmy2 0.51 79 0.32 5.4e-31 -5.36 8.37e-08 0.35 FALSE
IC Hdac9 alternative polyA XM_063262499.1 0.17 2 0.1 4.3e-05 5.25 1.49e-07 0.65 FALSE
IC Hdac9 alternative polyA XM_063262503.1 0.2 1 0.13 5.5e-06 -5.25 1.56e-07 0.26 FALSE
IC Ahr gene expression Ahr 0.08 1 0.03 1.5e-02 -5.39 6.93e-08 0.05 TRUE
IC Ankmy2 gene expression Ankmy2 0.16 3131 0.08 2.1e-04 5.28 1.28e-07 0.38 FALSE
IC Tspan13 gene expression Tspan13 0.3 2922 0.23 7.4e-10 -5.43 5.50e-08 0.07 FALSE
IL Hdac9 alternative TSS NM_001200045.1 0.12 2250 0.1 2.2e-03 -5.81 6.32e-09 0.36 TRUE
IL Ankmy2 mRNA stability Ankmy2 0.18 1 0.07 7.8e-03 -5.31 1.11e-07 0.05 FALSE
Liver Ahr mRNA stability Ahr 0.02 2918 0.01 1.4e-02 5.31 1.07e-07 0.32 FALSE
OFC Hdac9 alternative polyA XM_063262499.1 0.37 3 0.12 1.0e-03 5.63 1.76e-08 0.38 FALSE
OFC Hdac9 alternative polyA XM_063262503.1 0.32 4 0.1 1.9e-03 -5.56 2.68e-08 0.36 FALSE
PL Hdac9 alternative polyA XM_063262499.1 0.03 1 0.02 1.3e-03 5.26 1.44e-07 0.07 FALSE
pVTA Hdac9 alternative polyA XM_063262499.1 0.05 1 0.04 2.7e-04 5.25 1.56e-07 0.3 FALSE
pVTA Tspan13 gene expression Tspan13 0.05 2922 0.04 1.7e-04 5.44 5.39e-08 0.27 FALSE