Best TWAS P=3.82e-08 · Best GWAS P=4.44e-07 conditioned to 4.21e-01
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Pigh | gene expression | ENSRNOG00000010914 | 0.11 | 17 | 0.07 | 3.4e-08 | 5.32 | 1.02e-07 | 0.63 | FALSE |
Adipose | Rdh11 | gene expression | ENSRNOG00000054770 | 0.22 | 67 | 0.17 | 3.6e-18 | 5.12 | 3.03e-07 | 0.49 | FALSE |
BLA | Pigh | alternative polyA | ENSRNOT00000014775 | 0.12 | 30 | 0.06 | 5.1e-04 | -5.18 | 2.23e-07 | 0.55 | FALSE |
BLA | Pigh | alternative polyA | ENSRNOT00000101349 | 0.16 | 2175 | 0.07 | 8.8e-05 | 5.28 | 1.29e-07 | 0.6 | FALSE |
BLA | Pigh | gene expression | ENSRNOG00000010914 | 0.25 | 114 | 0.2 | 5.3e-11 | 5.5 | 3.82e-08 | 0.75 | TRUE |
BLA | Pigh | isoform ratio | ENSRNOT00000014775 | 0.19 | 119 | 0.13 | 2.8e-07 | -5.18 | 2.20e-07 | 0.56 | FALSE |
BLA | Pigh | isoform ratio | ENSRNOT00000101349 | 0.18 | 156 | 0.11 | 1.0e-06 | 5.37 | 8.04e-08 | 0.69 | FALSE |
BLA | Mpp5 | mRNA stability | ENSRNOG00000008788 | 0.63 | 121 | 0.39 | 4.3e-22 | 5.1 | 3.41e-07 | 0.86 | FALSE |
Brain | Atp6v1d | mRNA stability | ENSRNOG00000009080 | 0.09 | 1744 | 0.04 | 3.0e-04 | -5.12 | 3.11e-07 | 0.79 | FALSE |
Liver | Pigh | isoform ratio | ENSRNOT00000101349 | 0.03 | 2174 | 0 | 9.9e-02 | 5.3 | 1.13e-07 | 0.45 | FALSE |
NAcc | Zfyve26 | intron excision ratio | chr6:98082700:98083733 | 0.33 | 95 | 0.23 | 3.9e-17 | 5.15 | 2.67e-07 | 0 | FALSE |
NAcc | Zfyve26 | intron excision ratio | chr6:98082703:98083733 | 0.34 | 96 | 0.23 | 2.0e-17 | -5.21 | 1.85e-07 | 0 | FALSE |
NAcc | Mpp5 | mRNA stability | ENSRNOG00000008788 | 0.46 | 23 | 0.25 | 1.0e-18 | 5.14 | 2.77e-07 | 0.09 | FALSE |
PL | Pigh | gene expression | ENSRNOG00000010914 | 0.4 | 313 | 0.27 | 7.8e-21 | 5.15 | 2.60e-07 | 0.72 | FALSE |
PL | Pigh | isoform ratio | ENSRNOT00000101349 | 0.13 | 2174 | 0.09 | 3.6e-07 | 5.35 | 8.68e-08 | 0.79 | FALSE |
PL | Mpp5 | mRNA stability | ENSRNOG00000008788 | 0.67 | 1512 | 0.45 | 6.3e-38 | 5.23 | 1.66e-07 | 0.84 | FALSE |