Best TWAS P=1.90e-09 · Best GWAS P=7.65e-08 conditioned to 1.74e-01
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Hdac9 | alternative TSS | ENSRNOT00000005521 | 0.06 | 1 | 0.05 | 1.9e-06 | 5.16 | 2.42e-07 | 0.68 | FALSE |
Adipose | Hdac9 | alternative TSS | ENSRNOT00000098095 | 0.06 | 1 | 0.05 | 2.2e-06 | -5.16 | 2.42e-07 | 0.68 | FALSE |
Adipose | Snx13 | alternative TSS | ENSRNOT00000084661 | 0.02 | 2147 | 0 | 1.4e-01 | 5.28 | 1.28e-07 | 0.3 | FALSE |
Adipose | Snx13 | alternative TSS | ENSRNOT00000084661 | 0.03 | 59 | 0.01 | 3.5e-02 | 6 | 1.98e-09 | 0.52 | FALSE |
Adipose | Snx13 | alternative TSS | ENSRNOT00000095510 | 0.03 | 24 | 0.01 | 5.0e-02 | -6.01 | 1.90e-09 | 0.51 | TRUE |
Brain | Hdac9 | alternative polyA | ENSRNOT00000005521 | 0.06 | 26 | 0.04 | 9.1e-05 | 5.16 | 2.42e-07 | 0.67 | FALSE |
Brain | Hdac9 | alternative polyA | ENSRNOT00000098095 | 0.05 | 1 | 0.04 | 1.0e-04 | -5.16 | 2.42e-07 | 0.11 | FALSE |
IL | Ankmy2 | mRNA stability | ENSRNOG00000005623 | 0.23 | 3066 | 0.09 | 4.4e-03 | -5.26 | 1.46e-07 | 0.35 | FALSE |