Best TWAS P = 7.60e-10 · Best GWAS P= 2.54e-09 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Dcaf12 | alternative polyA | NM_001427703.1 | 0.04 | 1 | 0.02 | 2.2e-03 | 5.66 | 1.53e-08 | 0.07 | FALSE |
| Adipose | Dcaf12 | alternative polyA | XM_063288402.1 | 0.04 | 1 | 0.02 | 2.4e-03 | -5.66 | 1.53e-08 | 0.07 | FALSE |
| Adipose | Aptx | alternative TSS | XM_006238029.5 | 0.05 | 2129 | 0.04 | 2.1e-05 | 5.25 | 1.56e-07 | 0.48 | FALSE |
| Adipose | Aptx | alternative TSS | XM_006238029.5 | 0.05 | 2129 | 0.04 | 1.4e-05 | 5.27 | 1.38e-07 | 0.51 | FALSE |
| Adipose | Atp8b5p | alternative TSS | XM_039110987.2 | 0.03 | 207 | 0.04 | 2.0e-05 | -5.76 | 8.55e-09 | 0.12 | FALSE |
| Adipose | B4galt1 | gene expression | B4galt1 | 0.08 | 1 | 0.03 | 1.4e-04 | 5.58 | 2.35e-08 | 0.36 | FALSE |
| Adipose | Dnaja1 | gene expression | Dnaja1 | 0.15 | 23 | 0.1 | 4.7e-11 | 5.39 | 7.09e-08 | 0.61 | FALSE |
| Adipose | Galt | gene expression | Galt | 0.22 | 18 | 0.23 | 3.3e-25 | -5.35 | 8.73e-08 | 0.66 | FALSE |
| Adipose | LOC134486930 | gene expression | LOC134486930 | 0.04 | 1 | 0.03 | 5.7e-04 | -5.58 | 2.35e-08 | 0.07 | FALSE |
| Adipose | Nol6 | gene expression | Nol6 | 0.08 | 1 | 0.06 | 5.3e-07 | 5.66 | 1.53e-08 | 0.78 | FALSE |
| Adipose | Or13c7d | gene expression | Or13c7d | 0.17 | 1918 | 0.18 | 6.3e-20 | -5.2 | 1.95e-07 | 0.14 | FALSE |
| Adipose | Reck | gene expression | Reck | 0.12 | 1 | 0.09 | 2.6e-10 | 5.55 | 2.86e-08 | 0.69 | FALSE |
| Adipose | Spata31g1 | gene expression | Spata31g1 | 0.28 | 13 | 0.23 | 9.6e-26 | -5.27 | 1.36e-07 | 0.68 | FALSE |
| Adipose | Stoml2 | gene expression | Stoml2 | 0.03 | 1 | 0.01 | 1.2e-02 | 5.8 | 6.78e-09 | 0.04 | FALSE |
| Adipose | Aptx | isoform ratio | XM_006238028.5 | 0.02 | 1 | 0.02 | 3.5e-03 | -5.35 | 8.72e-08 | 0.04 | FALSE |
| Adipose | Reck | isoform ratio | XM_063287725.1 | 0.03 | 2078 | 0.02 | 1.4e-03 | 5.32 | 1.06e-07 | 0.55 | FALSE |
| Adipose | Unc13b | isoform ratio | XM_063288357.1 | 0.03 | 1 | 0.02 | 5.1e-03 | -5.57 | 2.58e-08 | 0.03 | FALSE |
| Adipose | Aptx | intron excision ratio | chr5_60605555_60606234 | 0.25 | 2129 | 0.26 | 1.0e-28 | -5.33 | 9.62e-08 | 0.73 | FALSE |
| Adipose | Aptx | intron excision ratio | chr5_60605555_60607510 | 0.25 | 2129 | 0.26 | 8.9e-29 | 5.34 | 9.48e-08 | 0.73 | FALSE |
| Adipose | Aptx | intron excision ratio | chr5_60607569_60609265 | 0.21 | 1 | 0.16 | 4.2e-17 | -5.32 | 1.03e-07 | 0.53 | FALSE |
| Adipose | Aptx | mRNA stability | Aptx | 0.04 | 1 | 0.03 | 8.5e-04 | -5.33 | 9.81e-08 | 0.06 | FALSE |
| Adipose | Atp8b5p | mRNA stability | Atp8b5p | 0.09 | 1628 | 0.09 | 3.3e-10 | 5.48 | 4.27e-08 | 0.34 | FALSE |
| Adipose | Dnaja1 | mRNA stability | Dnaja1 | 0.03 | 1 | 0.02 | 3.3e-03 | 5.32 | 1.03e-07 | 0.03 | FALSE |
| Adipose | Il11ra1 | mRNA stability | Il11ra1 | 0.03 | 1 | 0.01 | 7.7e-03 | -5.62 | 1.90e-08 | 0.03 | FALSE |
| Adipose | Rig1 | mRNA stability | Rig1 | 0.06 | 1 | 0.04 | 1.3e-05 | -5.51 | 3.69e-08 | 0.37 | FALSE |
| Adipose | Smu1 | mRNA stability | Smu1 | 0.07 | 1 | 0.05 | 3.0e-06 | -5.33 | 9.88e-08 | 0.46 | FALSE |
| Adipose | Ubap1 | mRNA stability | Ubap1 | 0.06 | 1214 | 0.03 | 4.1e-04 | 5.41 | 6.26e-08 | 0.66 | FALSE |
| BLA | Phf24 | alternative polyA | XM_006238122.5 | 0.29 | 27 | 0.16 | 5.1e-09 | -5.24 | 1.62e-07 | 0.29 | FALSE |
| BLA | Phf24 | alternative polyA | XM_006238122.5 | 0.27 | 44 | 0.15 | 1.6e-08 | -5.27 | 1.36e-07 | 0.28 | FALSE |
| BLA | Atosb | alternative TSS | XM_039109529.1 | 0.08 | 1 | 0.03 | 9.1e-03 | -5.94 | 2.82e-09 | 0.05 | FALSE |
| BLA | Fam219a | alternative TSS | NM_001415979.1 | 0.07 | 17 | 0.03 | 7.1e-03 | -5.59 | 2.26e-08 | 0.4 | FALSE |
| BLA | Fam219a | alternative TSS | XM_006238103.5 | 0.08 | 44 | 0.04 | 5.0e-03 | 5.53 | 3.17e-08 | 0.43 | FALSE |
| BLA | Aptx | gene expression | Aptx | 0.1 | 1 | 0.06 | 4.2e-04 | 5.58 | 2.35e-08 | 0.17 | FALSE |
| BLA | Arhgef39 | gene expression | Arhgef39 | 0.1 | 1672 | 0.08 | 5.3e-05 | 5.23 | 1.65e-07 | 0.44 | FALSE |
| BLA | Atp8b5p | gene expression | Atp8b5p | 0.14 | 1 | 0.14 | 1.1e-07 | 5.77 | 7.76e-09 | 0.38 | FALSE |
| BLA | Fam219a | gene expression | Fam219a | 0.56 | 131 | 0.4 | 1.0e-22 | 5.33 | 9.76e-08 | 0.05 | FALSE |
| BLA | Smim27 | gene expression | Smim27 | 0.08 | 2317 | 0.05 | 8.8e-04 | -5.51 | 3.55e-08 | 0.43 | FALSE |
| BLA | Spata31f3 | gene expression | Spata31f3 | 0.07 | 1 | 0.03 | 8.2e-03 | 5.62 | 1.95e-08 | 0.04 | FALSE |
| BLA | Fam219a | isoform ratio | NM_001415979.1 | 0.06 | 1 | 0.03 | 7.0e-03 | -5.58 | 2.35e-08 | 0.04 | FALSE |
| BLA | Galt | isoform ratio | XM_039109440.2 | 0.13 | 40 | 0.1 | 3.9e-06 | -5.7 | 1.19e-08 | 0.54 | FALSE |
| BLA | Phf24 | isoform ratio | NM_001398835.1 | 0.44 | 1427 | 0.33 | 2.5e-18 | 5.42 | 5.91e-08 | 0.36 | FALSE |
| BLA | Unc13b | isoform ratio | NM_022862.3 | 0.1 | 1 | 0.07 | 2.0e-04 | -5.94 | 2.82e-09 | 0.13 | FALSE |
| BLA | Pigo | mRNA stability | Pigo | 0.1 | 1 | 0.04 | 2.6e-03 | 5.57 | 2.53e-08 | 0.05 | FALSE |
| BLA | Vcp | mRNA stability | Vcp | 0.05 | 55 | 0.04 | 4.6e-03 | 5.93 | 3.08e-09 | 0.42 | TRUE |
| Brain | Atosb | alternative TSS | XM_039109529.1 | 0.04 | 10 | 0.04 | 3.1e-04 | -5.63 | 1.81e-08 | 0.44 | FALSE |
| Brain | Atosb | alternative TSS | XM_039109529.1 | 0.04 | 13 | 0.03 | 4.8e-04 | -5.78 | 7.35e-09 | 0.51 | FALSE |
| Brain | Ccdc107 | alternative TSS | NM_001107957.2 | 0.06 | 1 | 0.05 | 1.9e-05 | 5.94 | 2.92e-09 | 0.86 | FALSE |
| Brain | Ccdc107 | alternative TSS | XM_006238137.5 | 0.07 | 1 | 0.04 | 4.9e-05 | -5.64 | 1.72e-08 | 0.52 | FALSE |
| Brain | Ccdc107 | alternative TSS | NM_001107957.2 | 0.08 | 1 | 0.07 | 2.2e-07 | 5.57 | 2.58e-08 | 0.49 | FALSE |
| Brain | Ccdc107 | alternative TSS | XM_006238136.5 | 0.05 | 1 | 0.04 | 9.9e-05 | -5.57 | 2.58e-08 | 0.14 | FALSE |
| Brain | Rusc2 | alternative TSS | XM_039111004.2 | 0.06 | 1679 | 0.07 | 1.9e-07 | 5.44 | 5.41e-08 | 0.48 | FALSE |
| Brain | Unc13b | alternative TSS | XM_039110716.2 | 0.53 | 31 | 0.48 | 5.5e-50 | 5.68 | 1.34e-08 | 0.66 | FALSE |
| Brain | Atp8b5p | gene expression | Atp8b5p | 0.16 | 14 | 0.15 | 3.5e-14 | 5.89 | 3.76e-09 | 0.72 | FALSE |
| Brain | Ccdc107 | gene expression | Ccdc107 | 0.08 | 1667 | 0.07 | 8.4e-07 | -5.34 | 9.48e-08 | 0.7 | FALSE |
| Brain | Ccl21 | gene expression | Ccl21 | 0.05 | 143 | 0.04 | 2.5e-04 | -5.65 | 1.60e-08 | 0.54 | FALSE |
| Brain | Dcaf12 | gene expression | Dcaf12 | 0.19 | 130 | 0.11 | 1.5e-10 | 6.15 | 7.60e-10 | 0.85 | TRUE |
| Brain | Fam219a | gene expression | Fam219a | 0.2 | 83 | 0.16 | 3.8e-15 | 5.74 | 9.29e-09 | 0.64 | FALSE |
| Brain | Fam221b | gene expression | Fam221b | 0.04 | 1876 | 0.02 | 2.8e-03 | 5.3 | 1.13e-07 | 0.42 | FALSE |
| Brain | Npr2 | gene expression | Npr2 | 0.05 | 1 | 0.04 | 1.5e-04 | 5.63 | 1.85e-08 | 0.1 | FALSE |
| Brain | Nudt2 | gene expression | Nudt2 | 0.07 | 1 | 0.05 | 2.0e-05 | -5.74 | 9.68e-09 | 0.46 | FALSE |
| Brain | Rusc2 | gene expression | Rusc2 | 0.04 | 5 | 0.04 | 2.5e-04 | 5.39 | 7.22e-08 | 0.37 | FALSE |
| Brain | Spata31g1 | gene expression | Spata31g1 | 0.08 | 1 | 0.06 | 5.7e-06 | -5.88 | 4.06e-09 | 0.53 | FALSE |
| Brain | Tmem215 | gene expression | Tmem215 | 0.26 | 1 | 0.21 | 2.4e-19 | 5.37 | 7.91e-08 | 0.58 | FALSE |
| Brain | Tpm2 | gene expression | Tpm2 | 0.17 | 289 | 0.1 | 1.6e-09 | 5.28 | 1.26e-07 | 0.42 | FALSE |
| Brain | Unc13b | gene expression | Unc13b | 0.11 | 5 | 0.11 | 1.8e-10 | 5.96 | 2.51e-09 | 0.66 | TRUE |
| Brain | Vcp | gene expression | Vcp | 0.03 | 1 | 0.02 | 6.7e-03 | -5.94 | 2.82e-09 | 0.06 | FALSE |
| Brain | Atosb | isoform ratio | NM_001013931.2 | 0.03 | 1 | 0.03 | 1.4e-03 | 5.88 | 4.13e-09 | 0.05 | FALSE |
| Brain | Atosb | isoform ratio | XM_039109529.1 | 0.05 | 14 | 0.04 | 2.0e-04 | -5.47 | 4.50e-08 | 0.44 | FALSE |
| Brain | Cimip2b | isoform ratio | XM_063288529.1 | 0.04 | 1660 | 0.03 | 2.2e-03 | -5.67 | 1.43e-08 | 0.64 | FALSE |
| Brain | Galt | isoform ratio | XM_039109441.2 | 0.17 | 184 | 0.16 | 2.3e-14 | 5.35 | 8.91e-08 | 0.05 | FALSE |
| Brain | Galt | isoform ratio | XM_063287304.1 | 0.1 | 1 | 0.08 | 5.1e-08 | -5.63 | 1.84e-08 | 0.48 | FALSE |
| Brain | Nol6 | isoform ratio | NM_001427201.1 | 0.05 | 1 | 0.02 | 8.0e-03 | -5.66 | 1.48e-08 | 0.08 | FALSE |
| Brain | Nol6 | isoform ratio | XM_063287602.1 | 0.05 | 1 | 0.02 | 6.9e-03 | 5.66 | 1.48e-08 | 0.09 | FALSE |
| Brain | Phf24 | isoform ratio | NM_001398835.1 | 0.67 | 216 | 0.53 | 2.2e-57 | 5.24 | 1.64e-07 | 0.02 | FALSE |
| Brain | Phf24 | isoform ratio | XM_006238123.5 | 0.17 | 50 | 0.14 | 6.0e-13 | -6.05 | 1.43e-09 | 0.63 | FALSE |
| Brain | Unc13b | isoform ratio | NM_022862.3 | 0.2 | 1 | 0.2 | 1.9e-18 | -5.94 | 2.82e-09 | 0.8 | FALSE |
| Brain | Unc13b | isoform ratio | XM_063288361.1 | 0.05 | 2 | 0.04 | 2.3e-04 | 5.94 | 2.94e-09 | 0.64 | FALSE |
| Brain | Aptx | intron excision ratio | chr5_60607569_60609265 | 0.1 | 11 | 0.08 | 3.2e-08 | -5.36 | 8.30e-08 | 0.55 | FALSE |
| Brain | Atosb | intron excision ratio | chr5_62061114_62064183 | 0.06 | 46 | 0.04 | 4.5e-05 | -5.33 | 9.98e-08 | 0.42 | FALSE |
| Brain | Galt | intron excision ratio | chr5_61723973_61724347 | 0.03 | 152 | 0.02 | 5.3e-03 | 5.35 | 8.78e-08 | 0.46 | FALSE |
| Brain | Tmem8b | intron excision ratio | chr5_62735752_62735831 | 0.1 | 1 | 0.01 | 1.6e-02 | -5.55 | 2.86e-08 | 0.04 | FALSE |
| Brain | Atosb | mRNA stability | Atosb | 0.03 | 1 | 0.02 | 5.3e-03 | 5.94 | 2.92e-09 | 0.05 | FALSE |
| Brain | Ccdc107 | mRNA stability | Ccdc107 | 0.09 | 99 | 0.09 | 4.8e-09 | 5.67 | 1.44e-08 | 0.64 | FALSE |
| Brain | Creb3 | mRNA stability | Creb3 | 0.15 | 1 | 0.04 | 2.9e-04 | -5.74 | 9.61e-09 | 0.33 | FALSE |
| Brain | Fam219a | mRNA stability | Fam219a | 0.05 | 1 | 0.04 | 6.0e-05 | -5.63 | 1.84e-08 | 0.11 | FALSE |
| Brain | Phf24 | mRNA stability | Phf24 | 0.43 | 19 | 0.39 | 2.0e-38 | -5.89 | 3.81e-09 | 0.73 | FALSE |
| Brain | Smu1 | mRNA stability | Smu1 | 0.04 | 2057 | 0.03 | 1.5e-03 | -5.36 | 8.52e-08 | 0.56 | FALSE |
| Brain | Tesk1 | mRNA stability | Tesk1 | 0.08 | 1678 | 0.08 | 2.9e-08 | 5.32 | 1.04e-07 | 0.4 | FALSE |
| Brain | Unc13b | mRNA stability | Unc13b | 0.09 | 12 | 0.06 | 1.4e-06 | -5.5 | 3.77e-08 | 0.4 | FALSE |
| Eye | Atp8b5p | gene expression | Atp8b5p | 0.28 | 1 | 0.1 | 1.2e-02 | 5.94 | 2.82e-09 | 0.06 | FALSE |
| Eye | LOC134486929 | gene expression | LOC134486929 | 0.39 | 113 | 0.29 | 2.3e-05 | 5.22 | 1.81e-07 | 0.4 | FALSE |
| Eye | Rig1 | gene expression | Rig1 | 0.43 | 1 | 0.25 | 1.1e-04 | -5.27 | 1.38e-07 | 0.06 | FALSE |
| Eye | Tmem215 | gene expression | Tmem215 | 0.23 | 241 | 0.11 | 8.5e-03 | 5.29 | 1.20e-07 | 0.31 | FALSE |
| Eye | Aptx | intron excision ratio | chr5_60607569_60609743 | 0.47 | 146 | 0.27 | 4.6e-05 | 5.31 | 1.11e-07 | 0.42 | FALSE |
| Eye | Gne | intron excision ratio | chr5_63083891_63088265 | 0.53 | 14 | 0.26 | 6.6e-05 | -5.62 | 1.96e-08 | 0.59 | FALSE |
| IC | Ccl27 | alternative TSS | NM_001108660.1 | 0.12 | 1386 | 0.05 | 3.1e-03 | -5.33 | 1.01e-07 | 0.35 | FALSE |
| IC | Ccl27 | alternative TSS | XM_006238077.5 | 0.11 | 1386 | 0.05 | 3.8e-03 | 5.35 | 8.89e-08 | 0.35 | FALSE |
| IC | Ccl27 | alternative TSS | NM_001108660.1 | 0.11 | 1386 | 0.04 | 1.3e-02 | -5.23 | 1.74e-07 | 0.27 | FALSE |
| IC | Ccl27 | alternative TSS | XM_006238077.5 | 0.11 | 1386 | 0.03 | 2.0e-02 | 5.25 | 1.54e-07 | 0.28 | TRUE |
| IC | Spata31f3 | alternative TSS | XM_039110562.2 | 0.1 | 1375 | 0.04 | 1.1e-02 | 5.23 | 1.68e-07 | 0.36 | FALSE |
| IC | Spata31f3 | alternative TSS | NM_001024343.2 | 0.1 | 1375 | 0.05 | 3.7e-03 | 5.43 | 5.64e-08 | 0.37 | FALSE |
| IC | Spata31f3 | alternative TSS | XM_006238096.5 | 0.1 | 1375 | 0.05 | 3.7e-03 | -5.43 | 5.60e-08 | 0.37 | FALSE |
| IC | Ccl27 | gene expression | Ccl27 | 0.12 | 1 | 0.03 | 1.4e-02 | 5.83 | 5.54e-09 | 0.05 | FALSE |
| IC | Tmem215 | gene expression | Tmem215 | 0.37 | 1 | 0.03 | 1.9e-02 | 5.34 | 9.09e-08 | 0.05 | FALSE |
| IC | Tpm2 | isoform ratio | NM_001024345.2 | 0.15 | 1 | 0 | 2.1e-01 | -5.79 | 7.24e-09 | 0.04 | FALSE |
| IC | Aptx | intron excision ratio | chr5_60607569_60609265 | 0.17 | 2129 | 0.01 | 8.9e-02 | -5.33 | 9.93e-08 | 0.49 | FALSE |
| IC | Atosb | mRNA stability | Atosb | 0.11 | 17 | 0.03 | 1.8e-02 | -5.5 | 3.91e-08 | 0.31 | FALSE |
| IL | Atosb | alternative TSS | XM_039109528.2 | 0.14 | 10 | 0.06 | 1.3e-02 | -5.58 | 2.41e-08 | 0.42 | FALSE |
| IL | Atp8b5p | alternative TSS | XM_039110991.2 | 0.15 | 1 | 0.11 | 1.4e-03 | -5.74 | 9.61e-09 | 0.06 | FALSE |
| IL | Arid3c | gene expression | Arid3c | 0.16 | 84 | 0.08 | 5.1e-03 | -5.47 | 4.40e-08 | 0.49 | FALSE |
| IL | Atp8b5p | gene expression | Atp8b5p | 0.13 | 1 | 0.15 | 1.9e-04 | 5.46 | 4.75e-08 | 0.05 | FALSE |
| IL | Ccl21 | gene expression | Ccl21 | 0.3 | 1 | 0.21 | 1.0e-05 | -5.57 | 2.53e-08 | 0.07 | FALSE |
| IL | LOC134486931 | gene expression | LOC134486931 | 0.16 | 1 | 0.09 | 2.9e-03 | -5.57 | 2.53e-08 | 0.05 | FALSE |
| IL | Unc13b | gene expression | Unc13b | 0.18 | 1 | 0.11 | 1.5e-03 | 5.57 | 2.53e-08 | 0.05 | FALSE |
| IL | Galt | isoform ratio | XM_039109440.2 | 0.26 | 1372 | 0.13 | 4.9e-04 | -5.59 | 2.33e-08 | 0.56 | FALSE |
| IL | Galt | isoform ratio | XM_039109441.2 | 0.26 | 1372 | 0.2 | 1.4e-05 | 5.54 | 2.97e-08 | 0.53 | FALSE |
| IL | Unc13b | isoform ratio | NM_022862.3 | 0.44 | 1 | 0.33 | 7.7e-09 | -5.74 | 9.61e-09 | 0.38 | FALSE |
| IL | Gne | mRNA stability | Gne | 0.43 | 1993 | 0.32 | 2.3e-08 | -5.29 | 1.19e-07 | 0.57 | FALSE |
| IL | Phf24 | mRNA stability | Phf24 | 0.15 | 1 | 0.06 | 1.7e-02 | -5.57 | 2.53e-08 | 0.05 | FALSE |
| IL | Smu1 | mRNA stability | Smu1 | 0.19 | 1 | 0.13 | 5.9e-04 | -5.28 | 1.27e-07 | 0.05 | FALSE |
| LHb | Phf24 | alternative polyA | NM_001398835.1 | 0.34 | 1427 | 0.29 | 1.5e-07 | 5.62 | 1.87e-08 | 0.56 | FALSE |
| LHb | Phf24 | alternative polyA | XM_006238122.5 | 0.35 | 1427 | 0.29 | 1.4e-07 | -5.58 | 2.36e-08 | 0.55 | FALSE |
| LHb | Phf24 | alternative polyA | NM_001398835.1 | 0.35 | 1427 | 0.29 | 1.5e-07 | 5.6 | 2.09e-08 | 0.56 | FALSE |
| LHb | Phf24 | alternative polyA | XM_006238122.5 | 0.34 | 1427 | 0.28 | 2.0e-07 | -5.51 | 3.57e-08 | 0.53 | FALSE |
| LHb | Atp8b5p | gene expression | Atp8b5p | 0.12 | 1628 | 0.06 | 1.5e-02 | 5.27 | 1.34e-07 | 0.29 | FALSE |
| LHb | Rig1 | gene expression | Rig1 | 0.35 | 1 | 0.19 | 2.3e-05 | -5.24 | 1.61e-07 | 0.06 | FALSE |
| LHb | Topors | gene expression | Topors | 0.14 | 1 | 0.09 | 4.7e-03 | 5.24 | 1.61e-07 | 0.05 | FALSE |
| LHb | Phf24 | isoform ratio | NM_001398835.1 | 0.47 | 118 | 0.35 | 4.3e-09 | 5.97 | 2.43e-09 | 0.43 | FALSE |
| LHb | Phf24 | isoform ratio | XM_063288224.1 | 0.13 | 1427 | 0.07 | 1.1e-02 | -5.34 | 9.06e-08 | 0.35 | FALSE |
| LHb | Gne | mRNA stability | Gne | 0.3 | 1 | 0.23 | 3.8e-06 | -5.72 | 1.05e-08 | 0.82 | FALSE |
| Liver | Atp8b5p | alternative polyA | XM_039110987.2 | 0.06 | 1628 | 0.07 | 7.5e-08 | 5.4 | 6.50e-08 | 0.28 | FALSE |
| Liver | Atp8b5p | alternative polyA | XM_039110995.2 | 0.04 | 1628 | 0.04 | 5.6e-05 | -5.53 | 3.25e-08 | 0.49 | FALSE |
| Liver | Ccdc107 | alternative TSS | NM_001107957.2 | 0.02 | 1 | 0.02 | 4.6e-03 | -5.72 | 1.05e-08 | 0.04 | FALSE |
| Liver | Ccdc107 | alternative TSS | XM_039109982.2 | 0.05 | 1 | 0.03 | 2.0e-04 | 5.64 | 1.72e-08 | 0.3 | FALSE |
| Liver | Cimip2b | alternative TSS | XM_063288530.1 | 0.03 | 225 | 0.02 | 4.5e-03 | 5.65 | 1.64e-08 | 0.64 | FALSE |
| Liver | Cimip2b | alternative TSS | XM_063288533.1 | 0.04 | 140 | 0.02 | 3.0e-03 | -5.49 | 4.13e-08 | 0.66 | FALSE |
| Liver | LOC102547621 | alternative TSS | XR_010066508.1 | 0.05 | 1387 | 0.05 | 2.8e-06 | -5.62 | 1.88e-08 | 0.62 | FALSE |
| Liver | Rgp1 | alternative TSS | NM_001399573.1 | 0.02 | 1 | 0.02 | 1.8e-03 | -5.64 | 1.72e-08 | 0.04 | FALSE |
| Liver | Rgp1 | alternative TSS | XM_039111010.2 | 0.02 | 1 | 0.02 | 1.3e-03 | 5.64 | 1.72e-08 | 0.04 | FALSE |
| Liver | Atosb | gene expression | Atosb | 0.18 | 1704 | 0.17 | 2.8e-18 | 5.27 | 1.40e-07 | 0.01 | FALSE |
| Liver | Atp8b5p | gene expression | Atp8b5p | 0.34 | 29 | 0.33 | 6.3e-37 | 5.6 | 2.16e-08 | 0.7 | FALSE |
| Liver | Ccl21 | gene expression | Ccl21 | 0.09 | 191 | 0.11 | 8.9e-12 | 5.77 | 8.02e-09 | 0.71 | FALSE |
| Liver | Ccl27 | gene expression | Ccl27 | 0.18 | 102 | 0.23 | 1.2e-25 | -5.32 | 1.04e-07 | 0.02 | FALSE |
| Liver | Fam219a | gene expression | Fam219a | 0.04 | 1 | 0.02 | 6.3e-03 | 5.78 | 7.67e-09 | 0.04 | FALSE |
| Liver | Pigo | gene expression | Pigo | 0.09 | 13 | 0.08 | 4.6e-09 | 5.34 | 9.50e-08 | 0.16 | FALSE |
| Liver | Aptx | intron excision ratio | chr5_60607569_60609265 | 0.07 | 1 | 0.05 | 2.7e-06 | -5.66 | 1.53e-08 | 0.85 | FALSE |
| Liver | Aptx | intron excision ratio | chr5_60607569_60609743 | 0.56 | 1 | 0.45 | 2.3e-54 | 5.66 | 1.53e-08 | 0.88 | FALSE |
| Liver | Aptx | intron excision ratio | chr5_60609531_60609743 | 0.08 | 1 | 0.05 | 3.2e-06 | -5.27 | 1.36e-07 | 0.42 | FALSE |
| Liver | Galt | intron excision ratio | chr5_61723535_61723759 | 0.3 | 26 | 0.24 | 5.8e-26 | 5.38 | 7.27e-08 | 0.11 | FALSE |
| Liver | Rig1 | intron excision ratio | chr5_60143745_60145181 | 0.04 | 2388 | 0.03 | 1.4e-04 | 5.8 | 6.56e-09 | 0.5 | FALSE |
| Liver | Atp8b5p | mRNA stability | Atp8b5p | 0.14 | 12 | 0.14 | 3.4e-15 | 5.38 | 7.60e-08 | 0.55 | FALSE |
| Liver | Ndufb6 | mRNA stability | Ndufb6 | 0.03 | 2308 | 0.02 | 2.2e-03 | -5.75 | 8.70e-09 | 0.38 | FALSE |
| Liver | Nol6 | mRNA stability | Nol6 | 0.14 | 1 | 0.09 | 3.7e-10 | 5.75 | 9.18e-09 | 0.89 | FALSE |
| Liver | Pigo | mRNA stability | Pigo | 0.03 | 1 | 0.01 | 1.6e-02 | 5.57 | 2.58e-08 | 0.03 | FALSE |
| Liver | Rig1 | mRNA stability | Rig1 | 0.05 | 1 | 0.01 | 7.9e-03 | 5.22 | 1.74e-07 | 0.1 | FALSE |
| Liver | Smim27 | mRNA stability | Smim27 | 0.02 | 1 | 0.02 | 1.7e-03 | -5.26 | 1.48e-07 | 0.03 | FALSE |
| NAcc | Phf24 | alternative polyA | NM_001398835.1 | 0.76 | 149 | 0.46 | 2.1e-77 | 5.4 | 6.83e-08 | 0.01 | FALSE |
| NAcc | Phf24 | alternative polyA | XM_006238122.5 | 0.76 | 207 | 0.45 | 2.0e-76 | -5.4 | 6.82e-08 | 0.01 | FALSE |
| NAcc | Phf24 | alternative polyA | NM_001398835.1 | 0.71 | 143 | 0.44 | 5.3e-73 | 5.38 | 7.50e-08 | 0.01 | FALSE |
| NAcc | Phf24 | alternative polyA | XM_006238122.5 | 0.68 | 139 | 0.44 | 8.3e-73 | -5.38 | 7.34e-08 | 0.01 | FALSE |
| NAcc | Ccdc107 | alternative TSS | XM_006238137.5 | 0.03 | 1667 | 0.03 | 7.4e-05 | -5.7 | 1.21e-08 | 0.77 | FALSE |
| NAcc | Ccdc107 | alternative TSS | XM_039109982.2 | 0.03 | 1 | 0.03 | 1.6e-05 | 5.69 | 1.31e-08 | 0.49 | FALSE |
| NAcc | Ccdc107 | alternative TSS | NM_001107957.2 | 0.03 | 24 | 0.03 | 5.1e-05 | 5.89 | 3.81e-09 | 0.79 | FALSE |
| NAcc | Rusc2 | alternative TSS | XM_039111004.2 | 0.02 | 1 | 0.01 | 3.8e-03 | 5.72 | 1.05e-08 | 0.04 | FALSE |
| NAcc | Spata31f3 | alternative TSS | XM_006238096.5 | 0.02 | 1 | 0.01 | 1.9e-03 | -5.94 | 2.92e-09 | 0.17 | FALSE |
| NAcc | Spata31f3 | alternative TSS | XM_006238096.5 | 0.02 | 1 | 0.01 | 1.8e-02 | -5.94 | 2.92e-09 | 0.06 | FALSE |
| NAcc | Car9 | gene expression | Car9 | 0.18 | 233 | 0.13 | 2.0e-18 | -5.73 | 1.03e-08 | 0.67 | FALSE |
| NAcc | Ccdc107 | gene expression | Ccdc107 | 0.05 | 1 | 0.04 | 1.7e-06 | -5.94 | 2.92e-09 | 0.87 | FALSE |
| NAcc | Ccl27 | gene expression | Ccl27 | 0.02 | 1 | 0.03 | 8.6e-05 | 5.63 | 1.76e-08 | 0.12 | FALSE |
| NAcc | Fam219a | gene expression | Fam219a | 0.1 | 95 | 0.11 | 1.4e-16 | 5.67 | 1.46e-08 | 0.31 | FALSE |
| NAcc | Phf24 | gene expression | Phf24 | 0.02 | 76 | 0.01 | 3.3e-03 | 5.21 | 1.89e-07 | 0.52 | FALSE |
| NAcc | Smim27 | gene expression | Smim27 | 0.03 | 3 | 0.04 | 3.3e-06 | -5.45 | 4.90e-08 | 0.53 | FALSE |
| NAcc | Spata31f3 | gene expression | Spata31f3 | 0.03 | 1 | 0.02 | 4.2e-04 | 5.94 | 2.92e-09 | 0.24 | FALSE |
| NAcc | Tln1 | gene expression | Tln1 | 0.11 | 1 | 0.03 | 7.6e-05 | -5.9 | 3.57e-09 | 0.78 | FALSE |
| NAcc | Phf24 | isoform ratio | NM_001398835.1 | 0.53 | 101 | 0.47 | 7.5e-81 | 5.42 | 6.08e-08 | 0.01 | FALSE |
| NAcc | Phf24 | isoform ratio | XM_039110974.2 | 0.01 | 1427 | 0.01 | 3.8e-02 | -5.63 | 1.78e-08 | 0.43 | FALSE |
| NAcc | Phf24 | isoform ratio | XM_039110975.2 | 0.03 | 1 | 0.03 | 6.3e-05 | -5.93 | 2.98e-09 | 0.44 | FALSE |
| NAcc | Phf24 | isoform ratio | XM_063288222.1 | 0.03 | 1 | 0.03 | 6.5e-05 | 5.79 | 7.15e-09 | 0.35 | FALSE |
| NAcc | Unc13b | isoform ratio | NM_022862.3 | 0.08 | 28 | 0.09 | 3.8e-13 | -5.69 | 1.25e-08 | 0.64 | FALSE |
| NAcc | Unc13b | isoform ratio | XM_063288361.1 | 0.03 | 10 | 0.03 | 4.9e-05 | 5.73 | 1.01e-08 | 0.61 | FALSE |
| NAcc | Aptx | intron excision ratio | chr5_60607569_60609265 | 0.15 | 1 | 0.11 | 1.4e-16 | -5.51 | 3.55e-08 | 0.76 | FALSE |
| NAcc | Aptx | intron excision ratio | chr5_60609789_60611539 | 0.02 | 1 | 0.02 | 6.0e-04 | 5.39 | 6.97e-08 | 0.08 | FALSE |
| NAcc | Dcaf12 | intron excision ratio | chr5_61259133_61261619 | 0.02 | 1 | 0.01 | 1.1e-02 | 5.77 | 8.05e-09 | 0.06 | FALSE |
| NAcc | Galt | intron excision ratio | chr5_61723973_61724347 | 0.03 | 1372 | 0.03 | 4.4e-05 | 5.25 | 1.48e-07 | 0.32 | FALSE |
| NAcc | Phf24 | intron excision ratio | chr5_61940068_61956462 | 0.02 | 1 | 0.02 | 6.4e-04 | -5.93 | 2.98e-09 | 0.08 | FALSE |
| NAcc | Ccdc107 | mRNA stability | Ccdc107 | 0.03 | 1 | 0.04 | 9.9e-07 | 5.55 | 2.86e-08 | 0.38 | FALSE |
| NAcc | Phf24 | mRNA stability | Phf24 | 0.08 | 14 | 0.09 | 5.9e-13 | -5.93 | 3.04e-09 | 0.72 | FALSE |
| NAcc | Pigo | mRNA stability | Pigo | 0.02 | 21 | 0.01 | 3.3e-03 | 5.36 | 8.33e-08 | 0.4 | FALSE |
| NAcc | Tln1 | mRNA stability | Tln1 | 0.02 | 23 | 0.01 | 2.7e-03 | -5.52 | 3.34e-08 | 0.5 | FALSE |
| OFC | Rig1 | gene expression | Rig1 | 0.47 | 153 | 0.26 | 6.0e-07 | -5.35 | 8.64e-08 | 0.37 | FALSE |
| OFC | Unc13b | gene expression | Unc13b | 0.33 | 1 | 0.18 | 4.3e-05 | 5.74 | 9.61e-09 | 0.07 | FALSE |
| OFC | Phf24 | isoform ratio | XM_063288224.1 | 0.3 | 1 | 0.22 | 5.0e-06 | -5.57 | 2.53e-08 | 0.07 | FALSE |
| OFC | Unc13b | isoform ratio | NM_022862.3 | 0.6 | 1 | 0.25 | 1.6e-06 | -5.74 | 9.61e-09 | 0.12 | FALSE |
| OFC | Aptx | intron excision ratio | chr5_60607569_60609265 | 0.29 | 1 | 0.16 | 1.2e-04 | -5.24 | 1.61e-07 | 0.06 | FALSE |
| PL | Spata31f3 | alternative TSS | XM_006238096.5 | 0.03 | 1 | 0.02 | 4.8e-03 | -5.94 | 2.82e-09 | 0.12 | FALSE |
| PL | Spata31f3 | alternative TSS | XM_039110562.2 | 0.03 | 1 | 0.02 | 2.2e-03 | 5.94 | 2.82e-09 | 0.25 | FALSE |
| PL | Spata31f3 | alternative TSS | NM_001024343.2 | 0.03 | 57 | 0.02 | 3.4e-03 | 5.8 | 6.68e-09 | 0.56 | FALSE |
| PL | Spata31f3 | alternative TSS | XM_006238096.5 | 0.02 | 51 | 0.02 | 5.5e-03 | -5.8 | 6.75e-09 | 0.54 | FALSE |
| PL | Aco1 | gene expression | Aco1 | 0.07 | 4 | 0.04 | 1.2e-05 | 5.73 | 1.01e-08 | 0.6 | FALSE |
| PL | Arhgef39 | gene expression | Arhgef39 | 0.02 | 1 | 0.03 | 5.9e-04 | 5.72 | 1.05e-08 | 0.07 | FALSE |
| PL | Arid3c | gene expression | Arid3c | 0.04 | 1 | 0.04 | 5.5e-05 | -5.69 | 1.25e-08 | 0.17 | FALSE |
| PL | Atp8b5p | gene expression | Atp8b5p | 0.07 | 1 | 0.11 | 1.1e-11 | 5.55 | 2.86e-08 | 0.33 | FALSE |
| PL | Ccl21 | gene expression | Ccl21 | 0.11 | 1 | 0.13 | 3.8e-14 | -5.79 | 6.95e-09 | 0.7 | FALSE |
| PL | Dcaf12 | gene expression | Dcaf12 | 0.05 | 63 | 0.03 | 1.9e-04 | 5.47 | 4.43e-08 | 0.59 | FALSE |
| PL | LOC134486931 | gene expression | LOC134486931 | 0.19 | 21 | 0.18 | 2.1e-19 | -5.36 | 8.52e-08 | 0.71 | FALSE |
| PL | Smim27 | gene expression | Smim27 | 0.05 | 2317 | 0.06 | 2.5e-07 | -5.59 | 2.33e-08 | 0.38 | FALSE |
| PL | Spata31f3 | gene expression | Spata31f3 | 0.06 | 1 | 0.04 | 9.8e-06 | 5.94 | 2.82e-09 | 0.69 | FALSE |
| PL | Tmem215 | gene expression | Tmem215 | 0.17 | 2219 | 0.19 | 6.6e-20 | 5.28 | 1.28e-07 | 0.51 | FALSE |
| PL | Tpm2 | gene expression | Tpm2 | 0.11 | 64 | 0.08 | 2.3e-09 | 5.32 | 1.05e-07 | 0.42 | FALSE |
| PL | Ubap1 | gene expression | Ubap1 | 0.04 | 1214 | 0.02 | 1.8e-03 | 5.45 | 5.07e-08 | 0.67 | FALSE |
| PL | Atosb | isoform ratio | XM_039109529.1 | 0.02 | 1 | 0.02 | 2.9e-03 | -5.46 | 4.75e-08 | 0.03 | FALSE |
| PL | Galt | isoform ratio | XM_039109441.2 | 0.26 | 66 | 0.29 | 1.6e-31 | 5.2 | 1.95e-07 | 0.03 | FALSE |
| PL | Nol6 | isoform ratio | XM_063287602.1 | 0.05 | 16 | 0.02 | 2.3e-03 | 5.32 | 1.06e-07 | 0.75 | FALSE |
| PL | Phf24 | isoform ratio | XM_006238123.5 | 0.11 | 1427 | 0.12 | 1.4e-12 | -5.71 | 1.10e-08 | 0.65 | FALSE |
| PL | Phf24 | isoform ratio | XM_039110975.2 | 0.05 | 1427 | 0.04 | 1.4e-05 | -5.62 | 1.86e-08 | 0.55 | FALSE |
| PL | Phf24 | isoform ratio | XM_063288224.1 | 0.05 | 1427 | 0.04 | 1.3e-05 | -5.74 | 9.63e-09 | 0.63 | FALSE |
| PL | Tln1 | isoform ratio | NM_001039025.2 | 0.03 | 43 | 0.04 | 5.3e-05 | 5.55 | 2.81e-08 | 0.56 | FALSE |
| PL | Unc13b | isoform ratio | NM_022862.3 | 0.18 | 1 | 0.21 | 1.2e-22 | -5.76 | 8.64e-09 | 0.58 | FALSE |
| PL | Unc13b | isoform ratio | XM_063288361.1 | 0.12 | 22 | 0.12 | 9.7e-13 | 5.76 | 8.43e-09 | 0.67 | FALSE |
| PL | Aptx | intron excision ratio | chr5_60607569_60609265 | 0.09 | 1 | 0.07 | 1.7e-08 | -5.37 | 7.91e-08 | 0.6 | FALSE |
| PL | Atosb | intron excision ratio | chr5_62061114_62064183 | 0.03 | 1 | 0.02 | 2.6e-03 | -5.94 | 2.82e-09 | 0.09 | FALSE |
| PL | Galt | intron excision ratio | chr5_61723973_61724093 | 0.04 | 1 | 0.04 | 9.7e-06 | -5.76 | 8.64e-09 | 0.45 | FALSE |
| PL | Galt | intron excision ratio | chr5_61723973_61724347 | 0.1 | 24 | 0.1 | 1.4e-10 | 5.6 | 2.10e-08 | 0.66 | FALSE |
| PL | Phf24 | intron excision ratio | chr5_61945292_61956462 | 0.03 | 1 | 0.03 | 1.7e-04 | 5.57 | 2.53e-08 | 0.05 | FALSE |
| PL | Unc13b | intron excision ratio | chr5_62159418_62202518 | 0.04 | 1 | 0.02 | 9.7e-04 | 5.46 | 4.75e-08 | 0.04 | FALSE |
| PL | Phf24 | mRNA stability | Phf24 | 0.2 | 36 | 0.21 | 4.4e-23 | -5.88 | 4.22e-09 | 0.7 | FALSE |
| PL | Smu1 | mRNA stability | Smu1 | 0.28 | 45 | 0.07 | 2.6e-08 | -5.27 | 1.33e-07 | 0.79 | FALSE |
| PL | Tesk1 | mRNA stability | Tesk1 | 0.06 | 15 | 0.05 | 1.8e-06 | 5.69 | 1.27e-08 | 0.7 | FALSE |
| PL | Unc13b | mRNA stability | Unc13b | 0.05 | 29 | 0.04 | 3.2e-05 | -5.78 | 7.29e-09 | 0.61 | FALSE |
| PL | Vcp | mRNA stability | Vcp | 0.02 | 1630 | 0.02 | 2.8e-03 | 5.29 | 1.20e-07 | 0.34 | FALSE |
| pVTA | Atosb | alternative TSS | XM_039109529.1 | 0.05 | 1704 | 0.04 | 8.1e-04 | -5.74 | 9.25e-09 | 0.63 | FALSE |
| pVTA | Atosb | alternative TSS | XM_039109529.1 | 0.06 | 1704 | 0.05 | 1.3e-04 | -5.62 | 1.94e-08 | 0.55 | FALSE |
| pVTA | Ccdc107 | gene expression | Ccdc107 | 0.1 | 21 | 0.11 | 2.0e-09 | -5.81 | 6.25e-09 | 0.72 | FALSE |
| pVTA | Fam219a | gene expression | Fam219a | 0.1 | 1 | 0.12 | 7.2e-10 | 5.78 | 7.67e-09 | 0.72 | FALSE |
| pVTA | Il11ra1 | gene expression | Il11ra1 | 0.15 | 5 | 0.14 | 2.4e-11 | 5.49 | 3.91e-08 | 0.63 | FALSE |
| pVTA | Aptx | isoform ratio | XM_006238028.5 | 0.05 | 1 | 0.03 | 2.3e-03 | 5.34 | 9.09e-08 | 0.12 | FALSE |
| pVTA | Atosb | isoform ratio | XM_039109529.1 | 0.06 | 1704 | 0.04 | 4.4e-04 | -5.49 | 4.11e-08 | 0.46 | FALSE |
| pVTA | Galt | isoform ratio | XM_039109440.2 | 0.04 | 6 | 0.04 | 1.7e-04 | -5.52 | 3.41e-08 | 0.41 | FALSE |
| pVTA | Tln1 | isoform ratio | NM_001039025.2 | 0.14 | 1804 | 0.05 | 5.8e-05 | 5.26 | 1.43e-07 | 0.79 | FALSE |
| pVTA | Tln1 | isoform ratio | XM_063287730.1 | 0.1 | 1 | 0.05 | 7.7e-05 | -5.69 | 1.31e-08 | 0.25 | FALSE |
| pVTA | Tpm2 | isoform ratio | NM_001024345.2 | 0.04 | 1 | 0.05 | 1.1e-04 | -5.64 | 1.66e-08 | 0.12 | FALSE |
| pVTA | Tpm2 | isoform ratio | NM_001301235.1 | 0.04 | 1 | 0.04 | 2.7e-04 | 5.64 | 1.66e-08 | 0.09 | FALSE |
| pVTA | Unc13b | isoform ratio | NM_022862.3 | 0.08 | 1 | 0.08 | 8.4e-07 | -5.83 | 5.54e-09 | 0.65 | FALSE |
| pVTA | Unc13b | isoform ratio | XM_039110723.2 | 0.04 | 1 | 0.05 | 1.2e-04 | -5.52 | 3.45e-08 | 0.04 | FALSE |
| pVTA | Aptx | intron excision ratio | chr5_60607569_60609265 | 0.11 | 1 | 0.09 | 1.8e-07 | -5.48 | 4.37e-08 | 0.71 | FALSE |
| pVTA | Atosb | intron excision ratio | chr5_62061114_62064183 | 0.07 | 1 | 0.04 | 1.5e-04 | -5.83 | 5.54e-09 | 0.52 | FALSE |
| pVTA | Ccl27 | intron excision ratio | chr5_61738956_61741152 | 0.03 | 23 | 0.03 | 2.9e-03 | 5.65 | 1.64e-08 | 0.23 | FALSE |
| pVTA | Fancg | intron excision ratio | chr5_62028682_62029079 | 0.03 | 1 | 0.03 | 2.0e-03 | -5.76 | 8.64e-09 | 0.04 | FALSE |
| pVTA | Nol6 | intron excision ratio | chr5_61065779_61066181 | 0.04 | 1 | 0.03 | 2.1e-03 | -5.56 | 2.65e-08 | 0.05 | FALSE |
| pVTA | Spink4 | intron excision ratio | chr5_60778104_60854635 | 0.03 | 1809 | 0.02 | 4.3e-03 | -5.25 | 1.55e-07 | 0.36 | FALSE |
| pVTA | Unc13b | intron excision ratio | chr5_62159418_62202518 | 0.04 | 1712 | 0.04 | 2.2e-04 | 5.69 | 1.26e-08 | 0.57 | FALSE |
| pVTA | Unc13b | intron excision ratio | chr5_62199365_62202518 | 0.04 | 1712 | 0.04 | 2.3e-04 | -5.76 | 8.20e-09 | 0.61 | FALSE |
| RMTg | Ccdc107 | gene expression | Ccdc107 | 0.11 | 1667 | 0.07 | 6.2e-03 | -5.32 | 1.06e-07 | 0.34 | FALSE |
| RMTg | Galt | intron excision ratio | chr5_61724403_61724552 | 0.15 | 1372 | 0.08 | 3.1e-03 | 5.44 | 5.37e-08 | 0.41 | FALSE |
| RMTg | Galt | intron excision ratio | chr5_61724674_61724898 | 0.14 | 1372 | 0.06 | 1.0e-02 | -5.42 | 6.04e-08 | 0.39 | FALSE |
| RMTg | Phf24 | mRNA stability | Phf24 | 0.43 | 1 | 0.29 | 2.7e-08 | -5.84 | 5.29e-09 | 0.45 | FALSE |