chr3:129,554,891-132,898,674

Trait: Retroperitoneal fat weight

Best TWAS P=1.27e-20 · Best GWAS P=2.31e-20 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Kif16b alternative polyA ENSRNOT00000118037 0.08 1 0.05 5.3e-06 6.85 7.32e-12 0.02 FALSE
Adipose Dstn gene expression ENSRNOG00000005924 0.59 1575 0.48 3.4e-60 7.71 1.25e-14 0.03 FALSE
Adipose Dzank1 gene expression ENSRNOG00000007440 0.07 1 0.03 1.2e-04 -6.84 7.80e-12 0.03 FALSE
Adipose Rbbp9 gene expression ENSRNOG00000007972 0.22 1 0.07 2.9e-08 6.68 2.38e-11 0.01 FALSE
Adipose Dtd1 gene expression ENSRNOG00000008746 0.28 19 0.15 5.0e-16 7.11 1.12e-12 0.47 FALSE
Adipose Snrpb2 mRNA stability ENSRNOG00000004967 0.04 20 0.01 1.5e-02 -8.57 1.02e-17 0.33 FALSE
Adipose Dstn mRNA stability ENSRNOG00000005924 0.83 184 0.6 1.1e-83 6.97 3.23e-12 0 FALSE
Adipose Dzank1 mRNA stability ENSRNOG00000007440 0.04 1806 0.01 6.3e-02 5.14 2.78e-07 0.06 FALSE
Adipose Sec23b mRNA stability ENSRNOG00000008411 0.08 1 0.06 5.6e-07 7 2.58e-12 0.09 FALSE
BLA Kif16b gene expression ENSRNOG00000004951 0.04 1 0.04 4.1e-03 8.79 1.50e-18 0.04 FALSE
BLA Snrpb2 gene expression ENSRNOG00000004967 0.05 1 0.02 4.4e-02 8.91 5.25e-19 0.04 FALSE
BLA Pcsk2 gene expression ENSRNOG00000005438 0.11 1 0.07 1.9e-04 8.57 1.01e-17 0.04 FALSE
BLA Dstn gene expression ENSRNOG00000005924 0.84 268 0.64 9.8e-44 8 1.26e-15 0.24 FALSE
BLA Sec23b gene expression ENSRNOG00000008411 0.87 39 0.67 5.9e-48 6.62 3.70e-11 0.01 FALSE
BLA Dtd1 gene expression ENSRNOG00000008746 0.25 2 0.16 4.4e-09 6.28 3.37e-10 0.24 FALSE
BLA Scp2d1 gene expression ENSRNOG00000009461 0.32 11 0.23 2.1e-12 -5.4 6.51e-08 0 TRUE
BLA Zfp133 gene expression ENSRNOG00000027955 0.06 6 0.07 1.9e-04 -6.26 3.77e-10 0.14 FALSE
BLA Otor gene expression ENSRNOG00000028721 0.07 1960 0.04 2.7e-03 -8.64 5.87e-18 0.23 FALSE
BLA Smim26 gene expression ENSRNOG00000036971 0.11 41 0.06 5.0e-04 7.09 1.32e-12 0.37 FALSE
BLA ENSRNOG00000067833 gene expression ENSRNOG00000067833 0.09 1 0.02 3.9e-02 6.56 5.24e-11 0.04 FALSE
BLA Rbbp9 intron excision ratio chr3:131927367:131929585 0.14 1 0.07 8.2e-05 7.65 1.95e-14 0.62 FALSE
BLA Rbbp9 intron excision ratio chr3:131929308:131929585 0.13 1 0.07 7.7e-05 -7.65 1.95e-14 0.52 FALSE
BLA Rbbp9 intron excision ratio chr3:131929690:131930645 0.08 1819 0.04 2.9e-03 6.33 2.38e-10 0.44 FALSE
BLA Rbbp9 intron excision ratio chr3:131929690:131931999 0.17 1 0.14 6.7e-08 -7.16 8.19e-13 0.22 FALSE
BLA Sec23b intron excision ratio chr3:131955920:131958981 0.09 17 0.05 1.7e-03 6.66 2.77e-11 0.18 FALSE
BLA Pcsk2 mRNA stability ENSRNOG00000005438 0.23 1 0.15 3.1e-08 -8.9 5.34e-19 0.31 FALSE
BLA Dstn mRNA stability ENSRNOG00000005924 0.45 182 0.39 2.2e-22 8.9 5.35e-19 0.62 FALSE
BLA Kat14 mRNA stability ENSRNOG00000007160 0.05 4 0.03 9.8e-03 -7.44 1.00e-13 0.14 FALSE
BLA Sec23b mRNA stability ENSRNOG00000008411 0.42 9 0.33 2.8e-18 6.58 4.57e-11 0.02 TRUE
Brain Scp2d1 alternative polyA ENSRNOT00000012524 0.03 1 0.04 2.7e-04 -5.13 2.86e-07 0.03 FALSE
Brain Rrbp1 alternative TSS ENSRNOT00000055602 0.03 1597 0.03 2.1e-03 -7.39 1.48e-13 0.39 FALSE
Brain Rrbp1 alternative TSS ENSRNOT00000101060 0.03 1597 0.02 2.7e-03 7.5 6.54e-14 0.38 FALSE
Brain Kif16b gene expression ENSRNOG00000004951 0.19 74 0.09 1.0e-08 5.74 9.23e-09 0.07 FALSE
Brain Snrpb2 gene expression ENSRNOG00000004967 0.06 1963 0.05 1.0e-05 7.3 2.77e-13 0.38 FALSE
Brain Pcsk2 gene expression ENSRNOG00000005438 0.38 1 0.44 3.9e-44 8.95 3.71e-19 0.42 FALSE
Brain Dstn gene expression ENSRNOG00000005924 0.72 189 0.8 3.2e-120 7.76 8.20e-15 0 FALSE
Brain Rrbp1 gene expression ENSRNOG00000005958 0.14 1597 0.16 4.1e-15 -8.25 1.61e-16 0.28 FALSE
Brain Dzank1 gene expression ENSRNOG00000007440 0.08 1807 0.07 2.7e-07 -5.3 1.15e-07 0.49 FALSE
Brain Sec23b gene expression ENSRNOG00000008411 0.78 128 0.8 7.8e-119 6.95 3.75e-12 0.01 FALSE
Brain Dtd1 gene expression ENSRNOG00000008746 0.16 1 0.17 3.5e-15 6.81 9.44e-12 0.08 FALSE
Brain Scp2d1 gene expression ENSRNOG00000009461 0.2 26 0.25 7.6e-23 -5.15 2.55e-07 0 TRUE
Brain Zfp133 gene expression ENSRNOG00000027955 0.17 1 0.16 2.7e-14 -7.03 2.09e-12 0.04 FALSE
Brain Otor gene expression ENSRNOG00000028721 0.1 25 0.11 5.1e-10 -8.3 1.08e-16 0.34 FALSE
Brain Smim26 gene expression ENSRNOG00000036971 0.11 1 0.07 1.6e-07 6.4 1.60e-10 0.01 FALSE
Brain ENSRNOG00000067833 gene expression ENSRNOG00000067833 0.35 345 0.09 6.8e-09 6.37 1.83e-10 0.37 TRUE
Brain Snrpb2 intron excision ratio chr3:130399307:130400989 0.03 1 0.03 5.7e-04 8.99 2.42e-19 0.04 FALSE
Brain Sec23b intron excision ratio chr3:131955920:131958981 0.3 118 0.22 3.0e-20 6.96 3.40e-12 0.06 FALSE
Brain Kif16b mRNA stability ENSRNOG00000004951 0.07 1 0.01 1.5e-02 -6.74 1.54e-11 0.03 TRUE
Brain Snrpb2 mRNA stability ENSRNOG00000004967 0.03 1963 0.01 1.3e-02 7.13 9.99e-13 0.3 FALSE
Brain Dstn mRNA stability ENSRNOG00000005924 0.71 239 0.52 1.2e-56 8.04 9.35e-16 0 FALSE
Brain Sec23b mRNA stability ENSRNOG00000008411 0.55 164 0.65 6.8e-80 6.89 5.77e-12 0.02 FALSE
Brain Dtd1 mRNA stability ENSRNOG00000008746 0.08 3 0.07 1.7e-07 6 1.98e-09 0.18 FALSE
Brain Smim26 mRNA stability ENSRNOG00000036971 0.03 1 0.02 2.7e-03 7.01 2.38e-12 0.04 FALSE
Eye Dstn gene expression ENSRNOG00000005924 0.77 1048 0.25 1.1e-04 7.99 1.38e-15 0.36 FALSE
Eye Sec23b gene expression ENSRNOG00000008411 0.81 19 0.29 2.1e-05 7.47 8.06e-14 0.61 FALSE
Eye Zfp133 intron excision ratio chr3:131829590:131840865 0.3 1 0.04 9.9e-02 -7.83 4.77e-15 0.06 FALSE
IL Pcsk2 gene expression ENSRNOG00000005438 0.49 1 0.21 7.5e-06 9.02 1.91e-19 0.11 FALSE
IL Dstn gene expression ENSRNOG00000005924 0.79 1574 0.39 2.0e-10 8.51 1.78e-17 0.54 FALSE
IL Sec23b gene expression ENSRNOG00000008411 0.9 1823 0.5 7.8e-14 5.18 2.25e-07 0.05 TRUE
IL ENSRNOG00000067833 gene expression ENSRNOG00000067833 0.33 9 0.13 5.9e-04 6.84 7.96e-12 0.08 FALSE
IL Dzank1 intron excision ratio chr3:131906549:131908083 0.18 1 0.1 2.0e-03 6.46 1.05e-10 0.05 FALSE
IL Sec23b intron excision ratio chr3:131955920:131958981 0.39 1 0.27 4.2e-07 6.69 2.24e-11 0.04 FALSE
IL Dstn mRNA stability ENSRNOG00000005924 0.54 1574 0.34 4.2e-09 7.72 1.19e-14 0.52 FALSE
LHb Snrpb2 gene expression ENSRNOG00000004967 0.24 1 0.15 2.3e-04 9.09 9.85e-20 0.07 FALSE
LHb Dstn gene expression ENSRNOG00000005924 0.8 8 0.5 1.3e-13 8.31 9.41e-17 0.43 FALSE
LHb Rrbp1 gene expression ENSRNOG00000005958 0.22 1 0.21 1.0e-05 -8.89 6.22e-19 0.06 FALSE
LHb Dzank1 gene expression ENSRNOG00000007440 0.14 1804 0.04 4.6e-02 -6.75 1.43e-11 0.4 FALSE
LHb Sec23b gene expression ENSRNOG00000008411 0.79 17 0.53 6.5e-15 6.32 2.60e-10 0.06 FALSE
LHb Zfp133 gene expression ENSRNOG00000027955 0.19 1 0.03 6.1e-02 -6.67 2.51e-11 0.05 FALSE
LHb Otor gene expression ENSRNOG00000028721 0.26 5 0.01 1.7e-01 -8.95 3.70e-19 0.21 FALSE
LHb Sec23b intron excision ratio chr3:131955920:131958981 0.33 1822 0.17 6.8e-05 6.32 2.54e-10 0.38 FALSE
LHb Kif16b mRNA stability ENSRNOG00000004951 0.11 6 0.03 7.3e-02 -8.64 5.41e-18 0.33 FALSE
LHb Dstn mRNA stability ENSRNOG00000005924 0.39 1 0.37 8.7e-10 7.57 3.68e-14 0.03 FALSE
LHb Sec23b mRNA stability ENSRNOG00000008411 0.57 1822 0.4 1.6e-10 6.44 1.21e-10 0.29 FALSE
Liver Kif16b alternative polyA ENSRNOT00000036273 0.18 1 0.14 6.7e-15 -8.71 3.08e-18 0.11 FALSE
Liver Kif16b alternative polyA ENSRNOT00000118037 0.18 1 0.14 1.3e-15 8.68 3.89e-18 0.09 FALSE
Liver Rrbp1 alternative polyA ENSRNOT00000055602 0.04 1596 0.01 3.5e-02 -5.68 1.38e-08 0.24 FALSE
Liver Rrbp1 alternative polyA ENSRNOT00000101060 0.05 1596 0.02 5.4e-03 5.46 4.75e-08 0.23 TRUE
Liver Kif16b gene expression ENSRNOG00000004951 0.21 12 0.18 3.7e-19 -8.69 3.66e-18 0.63 FALSE
Liver Dstn gene expression ENSRNOG00000005924 0.67 1575 0.53 2.6e-69 7.94 2.03e-15 0.12 FALSE
Liver Kat14 gene expression ENSRNOG00000007160 0.05 37 0.04 3.9e-05 -7.81 5.53e-15 0.03 FALSE
Liver Dzank1 gene expression ENSRNOG00000007440 0.03 1806 0.01 3.1e-02 5.93 3.10e-09 0.1 FALSE
Liver Rbbp9 gene expression ENSRNOG00000007972 0.12 9 0.08 2.9e-09 6.29 3.27e-10 0.23 FALSE
Liver Sec23b gene expression ENSRNOG00000008411 0.09 1824 0.05 5.2e-06 6.55 5.91e-11 0.67 FALSE
Liver Dtd1 gene expression ENSRNOG00000008746 0.2 1829 0.09 1.2e-10 7.02 2.27e-12 0.51 FALSE
Liver Smim26 gene expression ENSRNOG00000036971 0.09 1823 0.04 1.5e-05 6.14 8.31e-10 0.66 FALSE
Liver Kif16b isoform ratio ENSRNOT00000083061 0.06 1 0.04 4.7e-05 -8.96 3.17e-19 0.31 FALSE
Liver Kif16b isoform ratio ENSRNOT00000118037 0.15 2140 0.13 4.0e-14 8.61 7.13e-18 0.46 FALSE
Liver Rrbp1 isoform ratio ENSRNOT00000101060 0.04 1596 0.01 3.3e-02 5.7 1.19e-08 0.24 FALSE
Liver Mgme1 isoform ratio ENSRNOT00000038865 0.03 1 0.02 4.0e-03 -8.18 2.73e-16 0.03 FALSE
Liver Mgme1 isoform ratio ENSRNOT00000098696 0.03 1 0.02 3.2e-03 8.18 2.73e-16 0.03 FALSE
Liver Kif16b intron excision ratio chr3:129976371:129996958 0.03 2140 0.01 2.4e-02 -8.1 5.44e-16 0.08 FALSE
Liver Kif16b intron excision ratio chr3:130221648:130253917 0.05 2140 0.03 4.0e-04 5.95 2.62e-09 0.25 FALSE
Liver Snrpb2 intron excision ratio chr3:130399307:130400989 0.04 1 0.03 3.5e-04 8.7 3.29e-18 0.04 FALSE
Liver Snrpb2 intron excision ratio chr3:130399832:130400989 0.06 1963 0.03 2.4e-04 -8.95 3.44e-19 0.54 FALSE
Liver Rbbp9 intron excision ratio chr3:131927367:131929585 0.29 91 0.21 2.3e-22 6.77 1.30e-11 0.3 FALSE
Liver Rbbp9 intron excision ratio chr3:131929308:131929585 0.29 25 0.2 9.7e-22 -6.75 1.53e-11 0.32 FALSE
Liver Kif16b mRNA stability ENSRNOG00000004951 0.13 30 0.06 1.2e-07 -6.53 6.61e-11 0.03 FALSE
Liver Dstn mRNA stability ENSRNOG00000005924 0.67 1575 0.5 1.1e-63 7.78 7.51e-15 0.05 FALSE
Liver Polr3f mRNA stability ENSRNOG00000007548 0.25 1804 0.22 1.0e-23 6.45 1.08e-10 0.07 FALSE
Liver Rbbp9 mRNA stability ENSRNOG00000007972 0.04 1818 0.01 8.2e-03 6.99 2.67e-12 0.62 FALSE
NAcc Snrpb2 gene expression ENSRNOG00000004967 0.04 1 0.02 1.4e-02 8.88 6.92e-19 0.04 FALSE
NAcc Pcsk2 gene expression ENSRNOG00000005438 0.25 6 0.15 3.4e-11 8.59 8.33e-18 0.48 FALSE
NAcc Dstn gene expression ENSRNOG00000005924 0.84 1 0.7 1.4e-71 7.98 1.43e-15 0 FALSE
NAcc Rrbp1 gene expression ENSRNOG00000005958 0.11 1 0.11 2.0e-08 -7.47 8.12e-14 0 FALSE
NAcc Sec23b gene expression ENSRNOG00000008411 0.81 242 0.8 3.7e-94 6.79 1.15e-11 0.01 FALSE
NAcc Dtd1 gene expression ENSRNOG00000008746 0.35 111 0.25 5.4e-19 6.1 1.04e-09 0.23 FALSE
NAcc Scp2d1 gene expression ENSRNOG00000009461 0.21 1 0.23 2.4e-17 -5.43 5.62e-08 0 FALSE
NAcc Zfp133 gene expression ENSRNOG00000027955 0.09 1755 0.05 1.8e-04 -6.75 1.46e-11 0.2 FALSE
NAcc Otor gene expression ENSRNOG00000028721 0.04 1 0.01 5.2e-02 -9.02 1.86e-19 0.04 FALSE
NAcc Rbbp9 intron excision ratio chr3:131927367:131929585 0.17 1 0.08 7.7e-07 6.97 3.13e-12 0.07 FALSE
NAcc Rbbp9 intron excision ratio chr3:131929308:131929585 0.17 79 0.08 1.7e-06 -6.93 4.23e-12 0.35 FALSE
NAcc Kif16b mRNA stability ENSRNOG00000004951 0.04 27 0.01 5.8e-02 -8.85 8.61e-19 0.44 FALSE
NAcc Dstn mRNA stability ENSRNOG00000005924 0.55 212 0.48 1.3e-39 8.28 1.19e-16 0.11 FALSE
NAcc Rbbp9 mRNA stability ENSRNOG00000007972 0.05 14 0.04 4.1e-04 6.17 7.00e-10 0.59 FALSE
NAcc Sec23b mRNA stability ENSRNOG00000008411 0.41 10 0.44 2.5e-35 6.77 1.26e-11 0.01 FALSE
OFC Pcsk2 gene expression ENSRNOG00000005438 0.62 9 0.38 5.0e-10 7.39 1.48e-13 0.34 FALSE
OFC Dstn gene expression ENSRNOG00000005924 0.82 41 0.52 1.4e-14 7.67 1.78e-14 0.43 FALSE
OFC Sec23b gene expression ENSRNOG00000008411 0.76 9 0.61 4.0e-18 6.02 1.78e-09 0.04 FALSE
OFC Scp2d1 gene expression ENSRNOG00000009461 0.55 1917 0.15 2.5e-04 -5.8 6.76e-09 0.43 FALSE
OFC Sec23b intron excision ratio chr3:131955920:131958981 0.53 6 0.25 1.3e-06 5.44 5.40e-08 0.06 FALSE
OFC Dstn mRNA stability ENSRNOG00000005924 0.29 1574 0.19 3.1e-05 8.26 1.48e-16 0.49 FALSE
OFC Sec23b mRNA stability ENSRNOG00000008411 0.59 1 0.42 3.9e-11 7.12 1.10e-12 0.17 FALSE
PL Snrpb2 gene expression ENSRNOG00000004967 0.12 9 0.11 1.3e-08 8.83 1.06e-18 0.39 FALSE
PL Pcsk2 gene expression ENSRNOG00000005438 0.15 80 0.18 1.0e-13 9.31 1.27e-20 0.46 TRUE
PL Dstn gene expression ENSRNOG00000005924 0.88 165 0.62 4.1e-59 7.91 2.60e-15 0.01 FALSE
PL Rrbp1 gene expression ENSRNOG00000005958 0.07 35 0.02 1.4e-02 -5.88 4.11e-09 0.33 FALSE
PL Sec23b gene expression ENSRNOG00000008411 0.79 134 0.73 3.5e-79 6.73 1.71e-11 0.01 FALSE
PL Dtd1 gene expression ENSRNOG00000008746 0.16 1 0.16 3.3e-12 7.01 2.42e-12 0.25 FALSE
PL Zfp133 gene expression ENSRNOG00000027955 0.19 1 0.12 1.3e-09 -7 2.57e-12 0.04 FALSE
PL Otor gene expression ENSRNOG00000028721 0.06 1972 0.05 1.0e-04 -8.54 1.36e-17 0.4 FALSE
PL Smim26 gene expression ENSRNOG00000036971 0.04 1822 0.03 1.8e-03 5.9 3.56e-09 0.29 FALSE
PL ENSRNOG00000067833 gene expression ENSRNOG00000067833 0.16 234 0.13 6.5e-10 5.43 5.66e-08 0.27 FALSE
PL Snrpb2 intron excision ratio chr3:130399307:130400989 0.05 1963 0.03 2.9e-03 9.19 3.86e-20 0.45 FALSE
PL Dzank1 intron excision ratio chr3:131906549:131907051 0.09 1 0.1 2.3e-08 -7.04 1.86e-12 0.11 FALSE
PL Rbbp9 intron excision ratio chr3:131929690:131931999 0.05 1 0.02 1.3e-02 -6.59 4.42e-11 0.03 FALSE
PL Sec23b intron excision ratio chr3:131955920:131958981 0.07 69 0.05 1.2e-04 6.59 4.55e-11 0.36 FALSE
PL Kif16b mRNA stability ENSRNOG00000004951 0.11 1 0.07 5.8e-06 -6.97 3.17e-12 0.02 FALSE
PL Snrpb2 mRNA stability ENSRNOG00000004967 0.09 41 0.03 1.4e-03 7.46 8.53e-14 0.21 FALSE
PL Pcsk2 mRNA stability ENSRNOG00000005438 0.04 1 0.02 5.4e-03 -9.06 1.26e-19 0.04 FALSE
PL Dstn mRNA stability ENSRNOG00000005924 0.7 52 0.49 6.1e-42 8 1.29e-15 0 FALSE
PL Sec23b mRNA stability ENSRNOG00000008411 0.4 211 0.45 3.6e-37 6.72 1.86e-11 0.06 FALSE