Hub : Traits : retroperitoneal_fat_g :

chr1:251,351,727-260,518,987

Best TWAS P=7.038627e-51 · Best GWAS P=1.939472e-51 conditioned to 1

Associated models

# Tissue Gene Modality RNA phenotype h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 Adipose Nhlrc2 alternative polyA ENSRNOT00000022788 0.03 0.00 top1 1 0.00 1.8e-01 7.9 7.9 2.3e-15 -0.41 0.06 0.03 FALSE
2 Adipose Nhlrc2 alternative polyA ENSRNOT00000105890 0.03 0.01 top1 1 0.01 3.7e-02 7.8 -7.8 5.1e-15 0.41 0.06 0.03 FALSE
3 Adipose Atrnl1 alternative polyA ENSRNOT00000105444 0.08 0.07 top1 1 0.07 4.0e-08 7.3 7.3 2.1e-13 -0.21 0.06 0.94 FALSE
4 Adipose Atrnl1 alternative polyA ENSRNOT00000115590 0.02 0.02 lasso 1 0.02 6.5e-03 7.8 7.8 5.1e-15 -0.38 0.42 0.48 FALSE
5 Adipose Atrnl1 alternative polyA ENSRNOT00000118477 0.63 0.22 top1 1 0.22 1.4e-23 7.8 -7.8 5.1e-15 0.20 0.00 1.00 FALSE
6 Adipose Atrnl1 alternative polyA ENSRNOT00000105444 0.08 0.07 top1 1 0.07 7.2e-08 7.3 7.3 2.1e-13 -0.21 0.06 0.94 FALSE
7 Adipose Atrnl1 alternative polyA ENSRNOT00000115590 0.02 0.02 lasso 1 0.02 6.5e-03 7.8 7.8 5.1e-15 -0.38 0.42 0.48 FALSE
8 Adipose Atrnl1 alternative polyA ENSRNOT00000118477 0.24 0.19 lasso 4 0.19 5.0e-21 7.8 -7.8 5.1e-15 0.37 0.01 0.99 FALSE
9 Adipose Zdhhc6 alternative polyA ENSRNOT00000054681 0.07 0.05 top1 1 0.05 1.6e-06 5.6 5.6 2.4e-08 -0.38 0.94 0.00 FALSE
10 Adipose Zdhhc6 alternative polyA ENSRNOT00000087680 0.04 0.03 top1 1 0.03 7.0e-04 5.6 -5.6 2.4e-08 0.34 0.25 0.02 FALSE
11 Adipose Zdhhc6 alternative polyA ENSRNOT00000103424 0.05 0.01 blup 2039 0.03 2.3e-04 7.6 -5.6 2.2e-08 0.41 0.47 0.48 FALSE
12 Adipose Zdhhc6 alternative polyA ENSRNOT00000054681 0.08 0.06 top1 1 0.06 1.1e-07 7.5 7.5 6.5e-14 -0.39 0.72 0.26 FALSE
13 Adipose Zdhhc6 alternative polyA ENSRNOT00000103424 0.08 0.07 top1 1 0.07 1.7e-08 7.5 -7.5 6.5e-14 0.39 0.73 0.27 FALSE
14 Adipose Dennd10 gene expression ENSRNOG00000010230 0.03 0.03 top1 1 0.03 2.5e-04 -11.3 -11.3 1.3e-29 0.69 0.24 0.02 FALSE
15 Adipose Prdx3 gene expression ENSRNOG00000010958 0.19 0.22 lasso 34 0.22 1.6e-23 -9.2 -9.6 6.0e-22 0.53 1.00 0.00 FALSE
16 Adipose Grk5 gene expression ENSRNOG00000011439 0.17 0.20 lasso 24 0.22 8.6e-24 -12.4 12.7 3.2e-37 -0.73 1.00 0.00 FALSE
17 Adipose Acsl5 gene expression ENSRNOG00000016265 0.03 0.01 blup 2070 0.02 2.1e-03 4.9 6.0 2.1e-09 -0.24 0.56 0.29 FALSE
18 Adipose Nrap gene expression ENSRNOG00000016714 0.05 0.03 blup 2070 0.05 2.5e-06 8.0 6.5 9.6e-11 -0.29 0.78 0.21 FALSE
19 Adipose Tdrd1 gene expression ENSRNOG00000017064 0.08 0.04 enet 231 0.05 6.6e-06 4.1 -5.3 1.0e-07 0.24 0.99 0.01 FALSE
20 Adipose Afap1l2 gene expression ENSRNOG00000017164 0.04 0.03 top1 1 0.03 2.3e-04 5.3 5.3 1.2e-07 -0.19 0.14 0.03 FALSE
21 Adipose Hspa12a gene expression ENSRNOG00000018019 0.47 0.27 lasso 46 0.28 6.9e-31 -4.8 -5.3 1.5e-07 0.39 1.00 0.00 FALSE
22 Adipose Eno4 gene expression ENSRNOG00000018310 0.05 0.01 enet 556 0.03 5.0e-04 2.7 -5.7 9.0e-09 0.19 0.90 0.00 FALSE
23 Adipose Ces2c gene expression ENSRNOG00000036571 0.11 0.03 blup 596 0.07 2.3e-08 -5.7 8.1 3.9e-16 -0.56 0.98 0.01 FALSE
24 Adipose AABR07007032.1 gene expression ENSRNOG00000046333 0.54 0.29 enet 19 0.31 3.7e-35 7.4 -7.2 6.5e-13 0.26 0.67 0.33 TRUE
25 Adipose Casp7 gene expression ENSRNOG00000056216 0.14 0.10 top1 1 0.10 9.3e-11 5.6 5.6 2.5e-08 -0.32 1.00 0.00 FALSE
26 Adipose NA gene expression ENSRNOG00000065260 0.17 0.12 top1 1 0.12 3.2e-13 -6.7 -6.7 2.5e-11 0.61 1.00 0.00 FALSE
27 Adipose NA gene expression ENSRNOG00000065957 0.02 0.00 blup 2197 0.01 1.2e-02 -8.5 -7.8 6.7e-15 0.34 0.57 0.03 FALSE
28 Adipose Acsl5 isoform ratio ENSRNOT00000103067 0.03 0.02 top1 1 0.02 9.2e-04 7.6 -7.6 3.7e-14 0.39 0.07 0.04 FALSE
29 Adipose Nhlrc2 isoform ratio ENSRNOT00000022788 0.04 0.02 top1 1 0.02 2.9e-03 7.9 7.9 3.3e-15 -0.39 0.09 0.10 FALSE
30 Adipose Nhlrc2 isoform ratio ENSRNOT00000105890 0.04 0.02 top1 1 0.02 4.0e-03 7.9 -7.9 3.3e-15 0.40 0.08 0.08 FALSE
31 Adipose Atrnl1 isoform ratio ENSRNOT00000105444 0.08 0.07 top1 1 0.07 4.2e-08 7.3 7.3 2.1e-13 -0.21 0.06 0.94 FALSE
32 Adipose Atrnl1 isoform ratio ENSRNOT00000115590 0.02 0.02 top1 1 0.02 4.6e-03 7.8 7.8 5.1e-15 -0.19 0.02 0.74 FALSE
33 Adipose Atrnl1 isoform ratio ENSRNOT00000118477 0.73 0.22 top1 1 0.22 1.2e-23 7.8 -7.8 5.1e-15 0.20 0.00 1.00 FALSE
34 Adipose AABR07007068.1 isoform ratio ENSRNOT00000104357 0.13 0.09 top1 1 0.09 8.3e-10 5.7 5.7 1.0e-08 -0.03 0.24 0.76 FALSE
35 Adipose AABR07007068.1 isoform ratio ENSRNOT00000119102 0.12 0.07 lasso 27 0.07 1.1e-08 5.9 -5.7 1.1e-08 0.25 0.19 0.81 FALSE
36 Adipose Zdhhc6 isoform ratio ENSRNOT00000054681 0.05 0.04 top1 1 0.04 1.6e-05 5.6 5.6 2.4e-08 -0.39 0.61 0.01 FALSE
37 Adipose Zdhhc6 isoform ratio ENSRNOT00000103424 0.05 0.00 blup 2039 0.02 9.0e-04 7.6 -5.1 3.0e-07 0.39 0.50 0.32 FALSE
38 Adipose AABR07007032.1 isoform ratio ENSRNOT00000108182 0.32 0.12 top1 1 0.12 4.9e-13 6.4 -6.4 1.2e-10 0.25 1.00 0.00 FALSE
39 Adipose Shoc2 intron excision ratio chr1:252996911:253013782 0.03 0.00 blup 1748 0.01 4.5e-02 5.2 5.3 1.4e-07 -0.19 0.35 0.37 FALSE
40 Adipose AABR07007032.1 intron excision ratio chr1:256098045:256100373 0.05 0.03 blup 2742 0.04 8.7e-05 6.9 6.5 9.5e-11 -0.29 0.76 0.23 FALSE
41 Adipose AABR07007032.1 intron excision ratio chr1:256098051:256100373 0.23 0.08 enet 260 0.10 6.0e-11 7.3 -7.3 3.7e-13 0.43 0.05 0.95 FALSE
42 Adipose AABR07007032.1 intron excision ratio chr1:256100420:256102022 0.10 0.04 lasso 22 0.05 1.4e-06 6.4 7.0 1.9e-12 -0.35 0.38 0.62 FALSE
43 Adipose AABR07007032.1 intron excision ratio chr1:256100420:256113239 0.18 0.09 lasso 50 0.09 2.8e-10 4.1 -6.0 1.6e-09 0.01 0.91 0.09 FALSE
44 Adipose AABR07007032.1 intron excision ratio chr1:256230416:256255914 0.03 0.02 top1 1 0.02 1.1e-03 7.3 7.3 3.4e-13 -0.25 0.09 0.04 FALSE
45 Adipose AABR07007032.1 intron excision ratio chr1:256230416:256298551 0.03 0.02 top1 1 0.02 8.8e-04 7.3 -7.3 3.4e-13 0.25 0.09 0.04 FALSE
46 Adipose Pdzd8 mRNA stability ENSRNOG00000009460 0.04 0.00 blup 1998 0.01 7.6e-02 -13.1 9.0 3.3e-19 -0.50 0.42 0.04 FALSE
47 Adipose Fam204a mRNA stability ENSRNOG00000009830 0.03 0.01 enet 64 0.01 5.4e-02 -5.3 7.3 3.6e-13 -0.51 0.45 0.06 FALSE
48 Adipose Cacul1 mRNA stability ENSRNOG00000009954 0.09 0.03 enet 62 0.04 5.6e-05 -3.4 9.2 2.8e-20 -0.74 0.96 0.04 FALSE
49 Adipose Xpnpep1 mRNA stability ENSRNOG00000012084 0.09 0.07 top1 1 0.07 1.4e-08 5.5 5.5 3.9e-08 -0.11 0.23 0.77 FALSE
50 Adipose Afap1l2 mRNA stability ENSRNOG00000017164 0.03 0.01 enet 3 0.03 6.3e-04 6.9 6.8 1.2e-11 -0.28 0.60 0.34 FALSE
51 Adipose Fhip2a mRNA stability ENSRNOG00000017225 0.09 0.07 top1 1 0.07 6.1e-08 5.2 -5.2 1.8e-07 0.19 1.00 0.00 FALSE
52 Adipose Atrnl1 mRNA stability ENSRNOG00000017406 0.11 0.02 enet 83 0.06 1.0e-06 7.3 6.9 6.4e-12 -0.37 0.49 0.50 FALSE
53 Adipose Dclre1a mRNA stability ENSRNOG00000026204 0.50 0.51 enet 405 0.53 8.8e-70 6.3 5.8 6.7e-09 -0.27 1.00 0.00 FALSE
54 BLA Rab11fip2 gene expression ENSRNOG00000009523 0.11 0.05 top1 1 0.05 1.1e-03 -10.8 -10.8 3.6e-27 0.71 0.12 0.04 FALSE
55 BLA Cacul1 gene expression ENSRNOG00000009954 0.23 0.16 top1 1 0.16 9.5e-09 -6.9 6.9 4.1e-12 -0.43 0.94 0.00 FALSE
56 BLA Ces2c gene expression ENSRNOG00000036571 0.26 0.19 lasso 16 0.20 1.1e-10 -11.7 11.6 2.9e-31 -0.71 0.94 0.06 FALSE
57 BLA Sfxn4 gene expression ENSRNOG00000036572 0.07 0.02 top1 1 0.02 2.1e-02 -14.2 14.2 1.6e-45 -0.83 0.06 0.04 FALSE
58 BLA NA gene expression ENSRNOG00000065260 0.36 0.23 top1 1 0.23 1.9e-12 -6.9 -6.9 4.1e-12 0.22 1.00 0.00 TRUE
59 BLA Cacul1 isoform ratio ENSRNOT00000084760 0.07 0.00 top1 1 0.00 2.4e-01 -12.3 -12.3 6.2e-35 0.69 0.07 0.04 FALSE
60 BLA AABR07007068.1 isoform ratio ENSRNOT00000104357 0.17 0.04 top1 1 0.04 3.5e-03 5.9 5.9 4.0e-09 -0.10 0.08 0.11 FALSE
61 BLA AABR07007068.1 isoform ratio ENSRNOT00000119102 0.20 0.04 top1 1 0.04 3.4e-03 5.9 -5.9 4.0e-09 0.09 0.08 0.11 FALSE
62 BLA Nhlrc2 mRNA stability ENSRNOG00000016948 0.05 0.02 blup 2147 0.03 1.1e-02 5.4 -5.9 2.9e-09 0.25 0.48 0.16 FALSE
63 BLA Dclre1a mRNA stability ENSRNOG00000026204 0.15 0.05 lasso 13 0.05 8.1e-04 6.1 6.0 1.8e-09 -0.31 0.88 0.08 FALSE
64 Brain AABR07007032.1 alternative polyA ENSRNOT00000117785 0.16 0.02 enet 26 0.03 9.4e-04 4.1 5.9 3.6e-09 -0.28 0.53 0.44 FALSE
65 Brain Mxi1 alternative TSS ENSRNOT00000076387 0.06 0.05 top1 1 0.05 1.1e-05 5.3 -5.3 1.2e-07 0.14 0.33 0.34 FALSE
66 Brain Mxi1 alternative TSS ENSRNOT00000076779 0.06 0.06 top1 1 0.06 6.5e-06 5.3 5.3 1.2e-07 -0.15 0.38 0.39 FALSE
67 Brain Rab11fip2 gene expression ENSRNOG00000009523 0.09 0.05 lasso 2 0.06 3.6e-06 -11.4 -11.0 4.7e-28 -0.46 0.96 0.04 FALSE
68 Brain Fam204a gene expression ENSRNOG00000009830 0.19 0.17 top1 1 0.17 1.3e-15 -5.6 5.6 2.0e-08 -0.69 1.00 0.00 FALSE
69 Brain Prlhr gene expression ENSRNOG00000009922 0.03 0.01 blup 1906 0.01 1.4e-02 -6.0 10.1 5.7e-24 -0.77 0.45 0.23 FALSE
70 Brain Cacul1 gene expression ENSRNOG00000009954 0.16 0.15 blup 1783 0.15 4.8e-14 -7.3 8.7 3.6e-18 -0.69 1.00 0.00 FALSE
71 Brain Rbm20 gene expression ENSRNOG00000014705 0.03 0.01 top1 1 0.01 3.5e-02 5.3 -5.3 1.3e-07 0.08 0.07 0.05 FALSE
72 Brain Gpam gene expression ENSRNOG00000015124 0.40 0.47 enet 153 0.48 2.1e-50 5.0 -5.9 3.8e-09 0.25 1.00 0.00 FALSE
73 Brain Afap1l2 gene expression ENSRNOG00000017164 0.21 0.14 lasso 21 0.22 2.2e-20 7.8 -7.3 3.1e-13 0.39 0.07 0.93 FALSE
74 Brain Fhip2a gene expression ENSRNOG00000017225 0.05 0.06 lasso 3 0.06 2.5e-06 6.2 -6.2 4.9e-10 0.32 0.91 0.09 FALSE
75 Brain Hspa12a gene expression ENSRNOG00000018019 0.10 0.07 blup 2058 0.08 6.8e-08 2.8 -5.3 1.1e-07 0.22 1.00 0.00 FALSE
76 Brain Nanos1 gene expression ENSRNOG00000025060 0.03 0.01 enet 58 0.01 2.2e-02 -11.3 -12.8 1.5e-37 0.86 0.55 0.29 FALSE
77 Brain Mxi1 gene expression ENSRNOG00000034078 0.26 0.17 blup 2601 0.20 1.9e-18 5.1 5.3 1.2e-07 -0.24 0.57 0.43 FALSE
78 Brain Ces2c gene expression ENSRNOG00000036571 0.20 0.28 blup 597 0.29 3.4e-27 -11.3 11.4 4.6e-30 -0.70 1.00 0.00 FALSE
79 Brain Sfxn4 gene expression ENSRNOG00000036572 0.09 0.08 lasso 36 0.09 2.2e-08 -6.3 9.2 2.3e-20 -0.57 1.00 0.00 FALSE
80 Brain Casp7 gene expression ENSRNOG00000056216 0.13 0.12 blup 2102 0.17 1.9e-15 6.1 6.6 3.7e-11 -0.31 0.92 0.07 FALSE
81 Brain NA gene expression ENSRNOG00000065260 0.37 0.39 top1 1 0.39 3.9e-38 -7.2 -7.2 7.0e-13 0.53 1.00 0.00 FALSE
82 Brain NA gene expression ENSRNOG00000071003 0.11 0.04 enet 5 0.06 4.5e-06 9.7 -7.1 1.7e-12 -0.02 0.98 0.01 FALSE
83 Brain Cacul1 isoform ratio ENSRNOT00000050617 0.14 0.11 top1 1 0.11 3.3e-10 -14.8 14.8 1.1e-49 -0.95 0.53 0.47 FALSE
84 Brain Cacul1 isoform ratio ENSRNOT00000084760 0.12 0.10 enet 5 0.11 5.6e-10 -14.8 -12.6 1.6e-36 -0.47 0.12 0.88 FALSE
85 Brain AABR07007068.1 isoform ratio ENSRNOT00000104357 0.22 0.19 top1 1 0.19 3.6e-17 5.7 5.7 1.1e-08 -0.06 0.25 0.75 FALSE
86 Brain AABR07007068.1 isoform ratio ENSRNOT00000119102 0.22 0.19 lasso 22 0.19 4.1e-17 5.7 -5.3 8.9e-08 0.21 0.14 0.86 FALSE
87 Brain Zfp950 isoform ratio ENSRNOT00000047883 0.04 0.03 blup 954 0.05 9.3e-06 -11.9 10.6 2.3e-26 -0.62 0.99 0.01 FALSE
88 Brain Mxi1 isoform ratio ENSRNOT00000076387 0.04 0.02 top1 1 0.02 5.8e-03 5.3 -5.3 1.2e-07 0.15 0.10 0.06 FALSE
89 Brain Cacul1 intron excision ratio chr1:259677583:259686255 0.12 0.08 enet 36 0.10 1.6e-09 -14.5 13.5 1.1e-41 -0.25 0.15 0.85 FALSE
90 Brain Gpam intron excision ratio chr1:254140727:254142324 0.03 0.01 blup 2121 0.02 2.8e-03 4.5 6.3 3.8e-10 -0.27 0.61 0.29 FALSE
91 Brain Gpam intron excision ratio chr1:254140727:254170436 0.05 0.03 enet 4 0.05 1.3e-05 -3.6 -5.2 2.2e-07 0.26 0.80 0.19 FALSE
92 Brain Trub1 intron excision ratio chr1:256535228:256548812 0.04 0.05 blup 2718 0.06 3.5e-06 5.6 5.3 1.2e-07 -0.18 0.95 0.04 FALSE
93 Brain NA intron excision ratio chr1:258565051:258626309 0.03 0.05 top1 1 0.05 1.1e-05 8.6 -8.6 6.9e-18 0.42 0.18 0.03 TRUE
94 Brain Cacul1 mRNA stability ENSRNOG00000009954 0.03 0.01 top1 1 0.01 2.3e-02 -7.1 7.1 9.3e-13 -0.66 0.07 0.03 FALSE
95 Brain Xpnpep1 mRNA stability ENSRNOG00000012084 0.13 0.09 blup 2957 0.12 5.4e-11 5.3 5.3 9.6e-08 -0.07 0.32 0.68 FALSE
96 Brain Nrap mRNA stability ENSRNOG00000016714 0.04 0.04 top1 1 0.04 1.5e-04 7.4 -7.4 1.0e-13 0.41 0.14 0.03 FALSE
97 Brain Afap1l2 mRNA stability ENSRNOG00000017164 0.56 0.41 blup 2422 0.44 2.6e-44 6.7 -6.8 1.1e-11 0.37 0.96 0.04 FALSE
98 Brain Atrnl1 mRNA stability ENSRNOG00000017406 0.24 0.25 blup 2591 0.27 1.4e-24 5.7 -5.7 9.0e-09 0.25 1.00 0.00 FALSE
99 Brain Dclre1a mRNA stability ENSRNOG00000026204 0.59 0.45 enet 190 0.49 6.1e-51 6.1 5.5 3.9e-08 -0.23 1.00 0.00 FALSE
100 Brain Casp7 mRNA stability ENSRNOG00000056216 0.12 0.04 blup 2102 0.04 5.0e-05 7.8 6.3 2.8e-10 -0.38 0.56 0.43 FALSE
101 Eye Tectb gene expression ENSRNOG00000015671 0.33 0.19 lasso 24 0.20 5.8e-04 5.7 7.5 8.9e-14 0.36 0.37 0.35 TRUE
102 Eye Pnlip gene expression ENSRNOG00000017725 0.41 0.08 blup 2057 0.10 1.3e-02 -4.8 -5.2 2.5e-07 0.33 0.42 0.10 FALSE
103 Eye Casp7 gene expression ENSRNOG00000056216 0.51 0.05 blup 2102 0.12 7.2e-03 7.1 7.3 3.5e-13 -0.47 0.28 0.30 FALSE
104 Eye NA gene expression ENSRNOG00000065260 0.45 0.18 top1 1 0.18 9.5e-04 -13.3 -13.3 2.0e-40 0.91 0.10 0.06 FALSE
105 IL Ces2c gene expression ENSRNOG00000036571 0.35 0.35 top1 1 0.35 2.3e-09 -11.7 11.7 1.1e-31 -0.72 0.50 0.03 FALSE
106 IL Sfxn4 gene expression ENSRNOG00000036572 0.19 0.13 top1 1 0.13 5.3e-04 -11.5 11.5 8.3e-31 -0.79 0.08 0.05 FALSE
107 IL NA gene expression ENSRNOG00000065260 0.38 0.26 top1 1 0.26 4.6e-07 -7.3 -7.3 2.5e-13 0.76 0.25 0.04 FALSE
108 IL Afap1l2 mRNA stability ENSRNOG00000017164 0.39 0.23 top1 1 0.23 3.5e-06 6.6 -6.6 3.6e-11 0.32 0.20 0.05 FALSE
109 IL Atrnl1 mRNA stability ENSRNOG00000017406 0.21 0.09 blup 2586 0.15 1.7e-04 5.8 -6.0 1.6e-09 0.23 0.44 0.51 FALSE
110 IL Dclre1a mRNA stability ENSRNOG00000026204 0.31 0.26 lasso 3 0.29 1.2e-07 7.7 7.3 2.7e-13 -0.35 0.41 0.59 FALSE
111 LHb Fam204a gene expression ENSRNOG00000009830 0.21 0.18 top1 1 0.18 4.2e-05 -5.3 5.3 1.1e-07 -0.74 0.14 0.05 FALSE
112 LHb Gpam gene expression ENSRNOG00000015124 0.18 0.03 blup 2117 0.12 1.1e-03 5.6 -6.9 3.8e-12 0.33 0.46 0.44 FALSE
113 LHb Gucy2g gene expression ENSRNOG00000015724 0.29 0.15 enet 9 0.21 9.6e-06 7.7 -7.2 4.6e-13 0.35 0.52 0.47 FALSE
114 LHb AABR07007068.1 gene expression ENSRNOG00000017438 0.20 0.08 top1 1 0.08 6.4e-03 6.0 -6.0 1.8e-09 0.14 0.10 0.11 FALSE
115 LHb Ces2c gene expression ENSRNOG00000036571 0.25 0.12 blup 594 0.19 2.3e-05 -11.6 10.9 8.8e-28 -0.66 0.58 0.31 FALSE
116 LHb Tcf7l2 gene expression ENSRNOG00000049232 0.14 0.04 lasso 6 0.06 1.2e-02 7.5 7.6 3.7e-14 -0.41 0.41 0.28 FALSE
117 LHb Casp7 gene expression ENSRNOG00000056216 0.12 0.12 top1 1 0.12 1.1e-03 6.0 6.0 1.7e-09 -0.42 0.11 0.05 FALSE
118 LHb Ccdc186 isoform ratio ENSRNOT00000080039 0.16 0.06 top1 1 0.06 1.8e-02 5.3 -5.3 1.5e-07 0.17 0.11 0.05 FALSE
119 LHb Afap1l2 mRNA stability ENSRNOG00000017164 0.46 0.29 top1 1 0.29 1.2e-07 6.1 -6.1 9.5e-10 0.30 0.51 0.03 FALSE
120 LHb Atrnl1 mRNA stability ENSRNOG00000017406 0.21 0.14 top1 1 0.14 3.1e-04 7.3 -7.3 2.8e-13 0.23 0.12 0.21 FALSE
121 LHb Dclre1a mRNA stability ENSRNOG00000026204 0.45 0.22 lasso 4 0.26 7.1e-07 6.0 5.8 7.3e-09 -0.29 0.89 0.09 FALSE
122 LHb Tcf7l2 mRNA stability ENSRNOG00000049232 0.15 0.07 enet 7 0.08 6.4e-03 4.7 6.4 2.0e-10 -0.29 0.44 0.23 FALSE
123 LHb Ccdc186 mRNA stability ENSRNOG00000051680 0.38 0.13 enet 10 0.23 3.0e-06 4.2 -5.2 2.1e-07 0.18 0.91 0.07 FALSE
124 Liver Casp7 alternative TSS ENSRNOT00000080511 0.02 0.01 blup 2101 0.01 8.5e-03 6.4 -7.4 1.4e-13 0.42 0.47 0.31 FALSE
125 Liver Casp7 alternative TSS ENSRNOT00000103804 0.02 0.01 top1 1 0.01 1.3e-02 6.4 6.4 1.2e-10 -0.40 0.06 0.03 FALSE
126 Liver Rab11fip2 gene expression ENSRNOG00000009523 0.03 0.00 blup 2371 0.01 1.3e-02 -6.7 -11.7 1.8e-31 0.80 0.39 0.24 FALSE
127 Liver Cacul1 gene expression ENSRNOG00000009954 0.23 0.16 lasso 15 0.16 1.3e-17 -6.6 6.7 2.9e-11 -0.58 1.00 0.00 FALSE
128 Liver Gpam gene expression ENSRNOG00000015124 0.14 0.05 lasso 16 0.09 1.3e-10 5.6 5.2 1.6e-07 -0.40 0.57 0.43 FALSE
129 Liver Acsl5 gene expression ENSRNOG00000016265 0.05 0.03 top1 1 0.03 1.4e-04 7.6 7.6 3.7e-14 -0.41 0.10 0.06 FALSE
130 Liver Habp2 gene expression ENSRNOG00000016659 0.92 0.57 top1 1 0.57 1.3e-76 7.8 -7.8 6.5e-15 0.34 0.62 0.38 FALSE
131 Liver Nhlrc2 gene expression ENSRNOG00000016948 0.11 0.11 top1 1 0.11 1.4e-12 6.1 -6.1 9.8e-10 0.34 1.00 0.00 FALSE
132 Liver Fhip2a gene expression ENSRNOG00000017225 0.02 0.02 top1 1 0.03 8.2e-04 7.8 -7.8 5.1e-15 0.25 0.04 0.57 FALSE
133 Liver Trub1 gene expression ENSRNOG00000017321 0.42 0.43 lasso 23 0.44 3.5e-54 5.8 -7.2 7.4e-13 0.41 0.99 0.01 FALSE
134 Liver Nanos1 gene expression ENSRNOG00000025060 0.03 0.02 top1 1 0.02 1.2e-03 -9.2 -9.2 3.2e-20 0.70 0.07 0.03 FALSE
135 Liver Dclre1a gene expression ENSRNOG00000026204 0.23 0.16 enet 429 0.17 1.8e-18 6.2 -6.3 2.5e-10 0.33 1.00 0.00 FALSE
136 Liver Zfp950 gene expression ENSRNOG00000032668 0.03 0.01 top1 1 0.01 7.7e-03 -13.3 -13.3 2.4e-40 0.75 0.03 0.03 FALSE
137 Liver Mxi1 gene expression ENSRNOG00000034078 0.27 0.26 top1 1 0.26 1.4e-28 5.5 5.5 3.9e-08 -0.12 0.24 0.76 FALSE
138 Liver NA gene expression ENSRNOG00000065260 0.29 0.23 lasso 21 0.23 1.1e-25 -6.6 -6.6 4.6e-11 0.57 1.00 0.00 FALSE
139 Liver Cacul1 isoform ratio ENSRNOT00000050617 0.03 0.02 top1 1 0.02 1.3e-03 -14.6 14.6 2.0e-48 -0.94 0.07 0.03 FALSE
140 Liver Cacul1 isoform ratio ENSRNOT00000084760 0.03 0.01 blup 1780 0.02 4.5e-03 -14.4 -12.5 8.8e-36 0.83 0.30 0.44 FALSE
141 Liver AABR07007068.1 isoform ratio ENSRNOT00000104357 0.51 0.38 top1 1 0.38 2.7e-44 5.7 5.7 1.1e-08 -0.05 0.25 0.75 FALSE
142 Liver AABR07007068.1 isoform ratio ENSRNOT00000119102 0.51 0.39 top1 1 0.39 1.5e-46 6.1 -6.1 1.2e-09 0.05 0.04 0.96 FALSE
143 Liver Gpam intron excision ratio chr1:254140727:254170436 0.02 0.01 blup 2121 0.01 1.0e-02 7.5 -7.2 6.9e-13 0.39 0.46 0.43 FALSE
144 Liver Habp2 intron excision ratio chr1:255327227:255336618 0.70 0.39 enet 28 0.40 5.1e-47 7.8 7.8 5.6e-15 -0.38 0.60 0.40 FALSE
145 Liver Habp2 intron excision ratio chr1:255336728:255338715 0.61 0.37 enet 26 0.38 7.9e-44 7.8 -7.8 5.4e-15 0.38 0.60 0.40 FALSE
146 Liver Nhlrc2 intron excision ratio chr1:255640509:255642738 0.23 0.26 enet 376 0.27 1.7e-29 6.2 6.5 6.8e-11 -0.35 1.00 0.00 FALSE
147 Liver Dclre1a intron excision ratio chr1:255572081:255573295 0.58 0.54 enet 391 0.56 2.0e-75 6.2 -5.5 4.8e-08 0.27 1.00 0.00 FALSE
148 Liver Dclre1a intron excision ratio chr1:255572081:255578402 0.25 0.25 lasso 34 0.26 2.0e-28 5.7 6.1 1.2e-09 -0.31 1.00 0.00 FALSE
149 Liver Tcf7l2 intron excision ratio chr1:254787414:254860496 0.03 0.00 lasso 14 0.00 2.1e-01 7.6 -7.4 9.4e-14 -0.31 0.35 0.48 FALSE
150 Liver Cacul1 mRNA stability ENSRNOG00000009954 0.03 0.01 top1 1 0.01 1.4e-02 -15.0 15.0 7.0e-51 -0.94 0.05 0.06 TRUE
151 Liver Acsl5 mRNA stability ENSRNOG00000016265 0.06 0.05 enet 97 0.06 8.6e-07 7.6 7.5 8.5e-14 -0.36 0.51 0.49 FALSE
152 Liver Habp2 mRNA stability ENSRNOG00000016659 0.47 0.38 top1 1 0.38 4.8e-44 7.9 -7.9 3.7e-15 0.35 0.48 0.52 FALSE
153 Liver Afap1l2 mRNA stability ENSRNOG00000017164 0.02 0.01 top1 1 0.01 1.2e-02 6.8 -6.8 9.3e-12 0.26 0.07 0.03 FALSE
154 Liver Dclre1a mRNA stability ENSRNOG00000026204 0.62 0.57 lasso 49 0.59 8.2e-81 6.2 5.7 1.3e-08 -0.26 1.00 0.00 FALSE
155 Liver Ccdc186 mRNA stability ENSRNOG00000051680 0.04 0.02 top1 1 0.02 4.3e-03 5.8 -5.8 7.2e-09 0.27 0.06 0.03 FALSE
156 NAcc Prlhr gene expression ENSRNOG00000009922 0.16 0.06 blup 1904 0.08 8.4e-03 -11.1 13.6 4.8e-42 -0.81 0.38 0.30 FALSE
157 NAcc Cacul1 gene expression ENSRNOG00000009954 0.24 0.02 lasso 3 0.07 1.1e-02 -6.7 9.9 3.8e-23 -0.77 0.30 0.33 FALSE
158 NAcc Acsl5 gene expression ENSRNOG00000016265 0.17 0.19 top1 1 0.19 4.2e-05 6.1 6.1 1.2e-09 -0.41 0.12 0.05 FALSE
159 NAcc Adrb1 gene expression ENSRNOG00000017002 0.29 0.17 lasso 2 0.17 1.1e-04 6.1 -6.1 1.3e-09 -0.08 0.55 0.42 FALSE
160 NAcc Afap1l2 gene expression ENSRNOG00000017164 0.19 0.07 blup 2419 0.11 1.8e-03 6.1 -6.3 2.7e-10 0.37 0.44 0.36 FALSE
161 NAcc AABR07007068.1 gene expression ENSRNOG00000017438 0.44 0.10 lasso 13 0.21 2.1e-05 5.7 6.0 1.7e-09 -0.33 0.18 0.76 FALSE
162 NAcc Ces2c gene expression ENSRNOG00000036571 0.14 0.00 blup 594 0.04 5.1e-02 -11.5 11.5 1.3e-30 -0.72 0.22 0.30 FALSE
163 NAcc NA gene expression ENSRNOG00000065260 0.67 0.27 top1 1 0.27 8.2e-07 -7.3 -7.3 3.0e-13 0.81 0.23 0.04 TRUE
164 NAcc NA gene expression ENSRNOG00000068699 0.43 0.21 top1 1 0.21 1.8e-05 5.4 5.4 8.6e-08 -0.08 0.17 0.05 FALSE
165 NAcc Afap1l2 mRNA stability ENSRNOG00000017164 0.26 0.13 top1 1 0.13 8.0e-04 6.9 -6.9 6.1e-12 0.31 0.13 0.05 FALSE
166 NAcc Atrnl1 mRNA stability ENSRNOG00000017406 0.19 0.08 top1 1 0.08 7.7e-03 5.7 -5.7 9.7e-09 0.24 0.14 0.05 FALSE
167 NAcc Mxi1 mRNA stability ENSRNOG00000034078 0.29 0.08 enet 10 0.19 5.1e-05 5.6 5.1 3.2e-07 -0.10 0.52 0.42 FALSE
168 NAcc2 Atrnl1 alternative polyA ENSRNOT00000118477 0.12 0.05 lasso 13 0.06 5.1e-04 5.2 -6.9 4.2e-12 0.32 0.52 0.46 FALSE
169 NAcc2 Prdx3 alternative TSS ENSRNOT00000015186 0.61 0.00 top1 1 0.00 3.3e-01 -6.7 6.7 2.4e-11 -0.87 0.06 0.04 FALSE
170 NAcc2 Rab11fip2 gene expression ENSRNOG00000009523 0.06 0.01 enet 81 0.02 3.0e-02 -5.0 -7.2 7.3e-13 0.47 0.54 0.08 FALSE
171 NAcc2 Prlhr gene expression ENSRNOG00000009922 0.10 0.02 blup 1906 0.03 8.1e-03 -14.9 12.1 1.4e-33 -0.88 0.27 0.64 FALSE
172 NAcc2 Gpam gene expression ENSRNOG00000015124 0.32 0.18 blup 2121 0.23 7.2e-13 4.9 -6.5 9.2e-11 0.29 0.74 0.26 FALSE
173 NAcc2 Acsl5 gene expression ENSRNOG00000016265 0.08 0.06 top1 1 0.06 6.2e-04 7.6 7.6 2.6e-14 -0.39 0.09 0.05 FALSE
174 NAcc2 Adrb1 gene expression ENSRNOG00000017002 0.26 0.14 blup 2156 0.14 3.7e-08 3.9 -5.2 1.9e-07 0.21 1.00 0.00 FALSE
175 NAcc2 Afap1l2 gene expression ENSRNOG00000017164 0.08 0.00 enet 54 0.01 1.1e-01 -3.1 -5.7 1.3e-08 0.38 0.50 0.13 FALSE
176 NAcc2 Ces2c gene expression ENSRNOG00000036571 0.25 0.18 blup 597 0.20 2.9e-11 -8.7 10.3 1.0e-24 -0.62 0.98 0.02 FALSE
177 NAcc2 AABR07007032.1 gene expression ENSRNOG00000046333 0.18 0.05 enet 133 0.09 1.5e-05 4.6 -6.4 1.2e-10 0.23 0.71 0.29 FALSE
178 NAcc2 Casp7 gene expression ENSRNOG00000056216 0.15 0.08 lasso 13 0.08 2.6e-05 7.8 7.9 4.1e-15 -0.39 0.35 0.65 FALSE
179 NAcc2 Atrnl1 isoform ratio ENSRNOT00000118477 0.09 0.06 top1 1 0.06 2.7e-04 7.8 -7.8 5.1e-15 0.17 0.01 0.90 FALSE
180 NAcc2 Zfp950 isoform ratio ENSRNOT00000096833 0.05 0.02 blup 954 0.03 1.2e-02 -10.2 -11.7 7.6e-32 0.72 0.21 0.51 FALSE
181 NAcc2 Zdhhc6 isoform ratio ENSRNOT00000054681 0.06 0.02 blup 2039 0.03 1.7e-02 7.4 7.1 1.5e-12 -0.45 0.34 0.39 FALSE
182 NAcc2 Atrnl1 mRNA stability ENSRNOG00000017406 0.10 0.03 blup 2591 0.04 1.9e-03 5.2 -6.0 2.0e-09 0.22 0.54 0.40 FALSE
183 NAcc2 Dclre1a mRNA stability ENSRNOG00000026204 0.21 0.10 top1 1 0.10 3.7e-06 6.0 6.0 1.6e-09 -0.34 0.91 0.00 FALSE
184 OFC Rab11fip2 gene expression ENSRNOG00000009523 0.30 0.23 lasso 17 0.27 5.1e-07 -14.5 -14.4 5.7e-47 0.98 0.43 0.56 FALSE
185 OFC Cacul1 gene expression ENSRNOG00000009954 0.45 0.24 blup 1782 0.41 9.5e-11 -6.7 10.9 8.8e-28 -0.80 0.40 0.60 FALSE
186 OFC Acsl5 gene expression ENSRNOG00000016265 0.32 0.16 blup 2066 0.19 2.8e-05 7.5 -7.3 2.7e-13 0.36 0.52 0.47 FALSE
187 OFC Nhlrc2 gene expression ENSRNOG00000016948 0.36 0.12 lasso 4 0.18 5.0e-05 6.1 -5.5 4.5e-08 0.27 0.77 0.14 FALSE
188 OFC Fhip2a gene expression ENSRNOG00000017225 0.16 0.09 top1 1 0.09 4.6e-03 6.9 -6.9 3.7e-12 0.25 0.14 0.05 FALSE
189 OFC Pnlip gene expression ENSRNOG00000017725 0.19 0.02 blup 2049 0.10 2.0e-03 -5.1 5.6 2.6e-08 -0.32 0.60 0.16 FALSE
190 OFC Hspa12a gene expression ENSRNOG00000018019 0.25 0.13 lasso 2 0.17 8.9e-05 -5.0 -5.3 1.3e-07 0.15 0.77 0.02 FALSE
191 OFC Mxi1 gene expression ENSRNOG00000034078 0.29 0.13 blup 2595 0.18 3.9e-05 5.5 5.5 4.4e-08 -0.22 0.35 0.59 FALSE
192 OFC Ces2c gene expression ENSRNOG00000036571 0.38 0.42 top1 1 0.42 3.6e-11 -11.6 11.6 3.3e-31 -0.71 0.92 0.00 FALSE
193 OFC Sfxn4 gene expression ENSRNOG00000036572 0.41 0.18 enet 17 0.26 7.0e-07 -11.4 12.2 1.9e-34 -0.81 0.96 0.02 FALSE
194 OFC Casp7 gene expression ENSRNOG00000056216 0.18 0.02 top1 1 0.02 1.1e-01 5.6 5.6 2.2e-08 -0.34 0.11 0.05 FALSE
195 OFC NA gene expression ENSRNOG00000065260 0.33 0.13 enet 42 0.21 1.0e-05 -5.5 -6.6 4.6e-11 0.48 0.89 0.04 FALSE
196 OFC Rab11fip2 mRNA stability ENSRNOG00000009523 0.16 0.19 top1 1 0.19 2.9e-05 -14.5 -14.5 1.9e-47 0.89 0.12 0.05 FALSE
197 OFC Afap1l2 mRNA stability ENSRNOG00000017164 0.55 0.16 enet 14 0.33 1.3e-08 6.6 -6.9 4.4e-12 0.33 0.76 0.23 FALSE
198 OFC Atrnl1 mRNA stability ENSRNOG00000017406 0.30 0.18 top1 1 0.18 5.1e-05 5.7 -5.7 1.1e-08 0.22 0.20 0.04 FALSE
199 OFC Dclre1a mRNA stability ENSRNOG00000026204 0.34 0.22 enet 11 0.29 1.1e-07 7.9 7.3 3.7e-13 -0.39 0.46 0.53 FALSE
200 PL Fam204a gene expression ENSRNOG00000009830 0.15 0.05 blup 2251 0.08 5.2e-03 -5.6 5.9 3.8e-09 -0.31 0.49 0.05 FALSE
201 PL Cacul1 gene expression ENSRNOG00000009954 0.36 0.09 enet 37 0.10 3.0e-03 -7.3 6.9 4.6e-12 -0.57 0.53 0.12 FALSE
202 PL Gucy2g gene expression ENSRNOG00000015724 0.33 0.14 enet 51 0.20 1.7e-05 7.6 -7.1 1.1e-12 0.34 0.44 0.54 FALSE
203 PL Nhlrc2 gene expression ENSRNOG00000016948 0.16 0.04 blup 2145 0.05 2.4e-02 3.9 -5.8 8.2e-09 0.24 0.58 0.12 FALSE
204 PL AABR07007068.1 gene expression ENSRNOG00000017438 0.61 0.34 top1 1 0.34 8.0e-09 5.9 -5.9 2.9e-09 0.08 0.09 0.77 FALSE
205 PL Ces2c gene expression ENSRNOG00000036571 0.29 0.11 blup 595 0.16 1.0e-04 -11.4 11.4 4.1e-30 -0.69 0.73 0.17 FALSE
206 PL Sfxn4 gene expression ENSRNOG00000036572 0.45 0.11 enet 15 0.21 1.2e-05 -5.7 6.2 5.6e-10 -0.42 0.68 0.03 FALSE
207 PL Casp7 gene expression ENSRNOG00000056216 0.13 0.04 enet 23 0.06 1.3e-02 7.8 5.9 2.9e-09 -0.24 0.39 0.39 FALSE
208 PL NA gene expression ENSRNOG00000065260 0.54 0.26 top1 1 0.26 5.9e-07 -5.7 -5.7 1.4e-08 0.70 0.25 0.04 FALSE
209 PL Fam204a mRNA stability ENSRNOG00000009830 0.35 0.15 lasso 2 0.16 1.0e-04 -5.3 -8.3 7.8e-17 0.68 0.67 0.04 FALSE
210 PL Afap1l2 mRNA stability ENSRNOG00000017164 0.35 0.30 top1 1 0.30 6.5e-08 6.3 -6.3 2.4e-10 0.32 0.41 0.03 FALSE
211 PL Dclre1a mRNA stability ENSRNOG00000026204 0.62 0.26 blup 2145 0.27 4.8e-07 6.7 5.5 4.0e-08 -0.31 0.94 0.04 FALSE
212 PL Ccdc186 mRNA stability ENSRNOG00000051680 0.56 0.11 blup 2166 0.23 3.1e-06 3.7 -5.2 1.9e-07 0.23 0.90 0.07 FALSE
213 PL2 Shtn1 alternative TSS ENSRNOT00000104427 0.29 0.12 blup 2135 0.22 4.0e-12 -3.3 -6.3 3.3e-10 0.51 1.00 0.00 FALSE
214 PL2 Rab11fip2 gene expression ENSRNOG00000009523 0.07 0.04 top1 1 0.04 3.2e-03 -14.1 -14.1 2.0e-45 0.93 0.09 0.04 FALSE
215 PL2 Cacul1 gene expression ENSRNOG00000009954 0.17 0.10 lasso 22 0.11 9.5e-07 -6.9 6.9 4.1e-12 -0.56 0.98 0.01 FALSE
216 PL2 Add3 gene expression ENSRNOG00000012820 0.07 0.03 blup 2636 0.06 5.8e-04 -3.2 -5.3 1.1e-07 0.11 0.56 0.31 FALSE
217 PL2 Gpam gene expression ENSRNOG00000015124 0.26 0.16 blup 2121 0.19 2.1e-10 4.9 -5.1 2.6e-07 0.18 1.00 0.00 FALSE
218 PL2 Gucy2g gene expression ENSRNOG00000015724 0.14 0.07 blup 2072 0.11 2.3e-06 5.1 -6.3 3.1e-10 0.27 0.82 0.17 FALSE
219 PL2 Fhip2a gene expression ENSRNOG00000017225 0.11 0.04 blup 2807 0.07 1.4e-04 7.3 -6.0 1.5e-09 0.21 0.66 0.33 FALSE
220 PL2 AABR07007068.1 gene expression ENSRNOG00000017438 0.21 0.08 top1 1 0.08 6.2e-05 5.7 -5.7 1.3e-08 0.03 0.10 0.11 FALSE
221 PL2 Vwa2 gene expression ENSRNOG00000025581 0.09 0.04 enet 13 0.07 1.4e-04 6.1 5.9 2.9e-09 -0.18 0.83 0.09 FALSE
222 PL2 Ces2c gene expression ENSRNOG00000036571 0.41 0.26 lasso 44 0.30 1.8e-16 -11.3 12.1 8.4e-34 -0.77 0.75 0.25 FALSE
223 PL2 Sfxn4 gene expression ENSRNOG00000036572 0.08 0.01 blup 1401 0.03 8.4e-03 -14.6 11.9 1.6e-32 -0.79 0.28 0.45 FALSE
224 PL2 Casp7 gene expression ENSRNOG00000056216 0.11 0.08 top1 1 0.08 6.4e-05 8.0 8.0 9.0e-16 -0.40 0.10 0.22 FALSE
225 PL2 NA gene expression ENSRNOG00000065260 0.58 0.26 lasso 19 0.28 1.1e-15 -7.3 -6.2 4.2e-10 -0.58 1.00 0.00 TRUE
226 PL2 NA gene expression ENSRNOG00000065957 0.18 0.06 enet 42 0.08 2.6e-05 9.8 -9.0 2.5e-19 0.60 0.90 0.02 FALSE
227 PL2 NA gene expression ENSRNOG00000068145 0.12 0.06 lasso 6 0.07 1.5e-04 9.8 -9.9 3.3e-23 0.69 0.73 0.11 FALSE
228 PL2 AABR07007068.1 isoform ratio ENSRNOT00000104357 0.16 0.04 blup 1987 0.05 1.6e-03 6.0 6.2 4.5e-10 -0.32 0.13 0.74 FALSE
229 PL2 AABR07007068.1 isoform ratio ENSRNOT00000119102 0.12 0.01 blup 1987 0.04 4.8e-03 6.0 -6.1 8.4e-10 0.33 0.16 0.49 FALSE
230 PL2 Gpam intron excision ratio chr1:254140727:254170436 0.06 0.04 top1 1 0.04 4.7e-03 7.7 -7.7 1.2e-14 0.40 0.09 0.06 FALSE
231 PL2 Xpnpep1 mRNA stability ENSRNOG00000012084 0.15 0.11 blup 2957 0.14 6.6e-08 -4.2 5.1 2.8e-07 -0.06 0.99 0.01 FALSE
232 PL2 Afap1l2 mRNA stability ENSRNOG00000017164 0.11 0.03 blup 2422 0.05 9.2e-04 6.3 -6.4 1.6e-10 0.38 0.52 0.29 FALSE
233 PL2 Atrnl1 mRNA stability ENSRNOG00000017406 0.22 0.08 blup 2591 0.12 5.4e-07 5.6 -5.8 7.8e-09 0.20 0.80 0.20 FALSE
234 PL2 Dclre1a mRNA stability ENSRNOG00000026204 0.25 0.18 blup 2147 0.20 3.5e-11 3.7 5.5 4.8e-08 -0.24 1.00 0.00 FALSE

h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.