Best TWAS P = 2.62e-09 · Best GWAS P= 2.03e-09 conditioned to 1.30e-01
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Ptprc | intron excision ratio | chr13_52200543_52204139 | 0.11 | 1 | 0.05 | 7.3e-06 | 5.27 | 1.38e-07 | 0.12 | FALSE |
| Adipose | LOC108352541 | mRNA stability | LOC108352541 | 0.13 | 36 | 0.07 | 5.9e-08 | -5.75 | 8.88e-09 | 0.45 | FALSE |
| Brain | LOC108352541 | gene expression | LOC108352541 | 0.14 | 1 | 0.1 | 6.2e-10 | 5.49 | 4.07e-08 | 0.39 | FALSE |
| IL | LOC108352541 | gene expression | LOC108352541 | 0.25 | 2884 | 0.08 | 6.3e-03 | 5.51 | 3.52e-08 | 0.35 | FALSE |
| NAcc | LOC108352541 | gene expression | LOC108352541 | 0.03 | 2884 | 0.02 | 1.5e-04 | 5.95 | 2.62e-09 | 0.67 | TRUE |
| PL | LOC108352541 | gene expression | LOC108352541 | 0.15 | 1 | 0.11 | 4.7e-12 | 5.69 | 1.24e-08 | 0.67 | FALSE |
| pVTA | LOC108352541 | gene expression | LOC108352541 | 0.14 | 1 | 0.13 | 1.8e-10 | 5.45 | 5.10e-08 | 0.34 | FALSE |