chr15:21,952,499-23,315,481

Trait: Retroperitoneal fat weight

Best TWAS P = 5.98e-08 · Best GWAS P= 1.58e-07 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose LOC134481955 gene expression LOC134481955 0.04 1158 0.03 1.6e-04 5.33 9.84e-08 0.43 FALSE
Brain Cgrrf1 gene expression Cgrrf1 0.08 2370 0.1 1.7e-09 -5.42 5.98e-08 0.66 TRUE
Brain Gmfb gene expression Gmfb 0.19 1 0.21 6.2e-19 5.21 1.88e-07 0.83 FALSE
Brain Samd4a mRNA stability Samd4a 0.04 2521 0.03 4.1e-04 -5.34 9.35e-08 0.57 FALSE
Liver Bmp4 alternative TSS NM_012827.2 0.02 1172 0.02 2.0e-03 -5.29 1.24e-07 0.36 FALSE
Liver Gmfb alternative TSS NM_031032.2 0.13 90 0.12 1.4e-13 5.23 1.65e-07 0.66 FALSE
Liver Gmfb alternative TSS XM_063274691.1 0.13 103 0.13 5.8e-14 -5.38 7.53e-08 0.66 FALSE
NAcc Bmp4 alternative TSS NM_012827.2 0.01 1172 0.01 4.2e-02 -5.26 1.46e-07 0.28 FALSE
NAcc Bmp4 alternative TSS XM_006251748.5 0.01 1172 0.01 1.8e-02 5.4 6.52e-08 0.48 FALSE
NAcc Cgrrf1 intron excision ratio chr15_22582670_22588012 0.07 2370 0.1 1.6e-15 5.23 1.70e-07 0.61 FALSE