Best TWAS P = 1.11e-08 · Best GWAS P= 3.03e-07 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | LOC102553943 | mRNA stability | LOC102553943 | 0.04 | 2023 | 0.02 | 5.3e-03 | 5.21 | 1.88e-07 | 0.6 | FALSE |
| Brain | LOC102553943 | alternative polyA | XR_005501249.2 | 0.3 | 2023 | 0.34 | 1.1e-32 | 5.28 | 1.30e-07 | 0.23 | FALSE |
| Brain | LOC102553943 | alternative polyA | XR_005501249.2 | 0.35 | 32 | 0.45 | 3.7e-46 | 5.46 | 4.80e-08 | 0.22 | FALSE |
| Brain | LOC102553943 | alternative polyA | XR_010064407.1 | 0.35 | 32 | 0.45 | 8.2e-46 | -5.44 | 5.30e-08 | 0.22 | TRUE |
| Brain | LOC102553943 | isoform ratio | XR_010064406.1 | 0.05 | 25 | 0.05 | 1.7e-05 | 5.39 | 6.92e-08 | 0.74 | TRUE |
| Brain | LOC102553943 | isoform ratio | XR_010064407.1 | 0.73 | 34 | 0.61 | 5.1e-72 | -5.45 | 5.15e-08 | 0.19 | FALSE |
| PL | LOC102553943 | alternative polyA | XR_005501249.2 | 0.14 | 22 | 0.17 | 3.8e-18 | 5.5 | 3.84e-08 | 0.22 | FALSE |
| PL | LOC102553943 | alternative polyA | XR_010064407.1 | 0.14 | 33 | 0.17 | 8.2e-18 | -5.52 | 3.47e-08 | 0.22 | FALSE |
| PL | LOC102553943 | gene expression | LOC102553943 | 0.09 | 2023 | 0.04 | 1.4e-05 | 5.71 | 1.11e-08 | 0.86 | TRUE |