chr2:210,912,033-212,287,153

Trait: Retroperitoneal fat weight

Best TWAS P = 1.11e-08 · Best GWAS P= 3.03e-07 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose LOC102553943 mRNA stability LOC102553943 0.04 2023 0.02 5.3e-03 5.21 1.88e-07 0.6 FALSE
Brain LOC102553943 alternative polyA XR_005501249.2 0.3 2023 0.34 1.1e-32 5.28 1.30e-07 0.23 FALSE
Brain LOC102553943 alternative polyA XR_005501249.2 0.35 32 0.45 3.7e-46 5.46 4.80e-08 0.22 FALSE
Brain LOC102553943 alternative polyA XR_010064407.1 0.35 32 0.45 8.2e-46 -5.44 5.30e-08 0.22 TRUE
Brain LOC102553943 isoform ratio XR_010064406.1 0.05 25 0.05 1.7e-05 5.39 6.92e-08 0.74 TRUE
Brain LOC102553943 isoform ratio XR_010064407.1 0.73 34 0.61 5.1e-72 -5.45 5.15e-08 0.19 FALSE
PL LOC102553943 alternative polyA XR_005501249.2 0.14 22 0.17 3.8e-18 5.5 3.84e-08 0.22 FALSE
PL LOC102553943 alternative polyA XR_010064407.1 0.14 33 0.17 8.2e-18 -5.52 3.47e-08 0.22 FALSE
PL LOC102553943 gene expression LOC102553943 0.09 2023 0.04 1.4e-05 5.71 1.11e-08 0.86 TRUE