Best TWAS P=8.51e-08 · Best GWAS P=1.73e-06 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Efhd1 | mRNA stability | Efhd1 | 0.46 | 87 | 0.21 | 2.0e-22 | 5.35 | 8.91e-08 | 0.94 | FALSE |
Brain | Neu2 | gene expression | Neu2 | 0.36 | 1585 | 0.25 | 1.1e-22 | 5.27 | 1.37e-07 | 0.95 | FALSE |
LHb | Efhd1 | alternative polyA | NM_001109310.1 | 0.57 | 15 | 0.23 | 3.2e-06 | -5.25 | 1.55e-07 | 0.9 | FALSE |
Liver | Efhd1 | alternative polyA | NM_001109310.1 | 0.16 | 1610 | 0.09 | 1.1e-09 | -5.27 | 1.39e-07 | 0.61 | FALSE |
Liver | Efhd1 | alternative polyA | XM_039084124.1 | 0.14 | 1610 | 0.07 | 1.6e-08 | 5.21 | 1.93e-07 | 0.72 | FALSE |
OFC | Efhd1 | alternative polyA | NM_001109310.1 | 0.89 | 1613 | 0.32 | 2.6e-08 | -5.32 | 1.04e-07 | 0.93 | FALSE |
OFC | Efhd1 | alternative polyA | XM_039084124.1 | 0.9 | 1613 | 0.32 | 2.9e-08 | 5.36 | 8.51e-08 | 0.93 | TRUE |
OFC | Efhd1 | alternative polyA | XM_039084124.1 | 0.45 | 1613 | 0.14 | 3.5e-04 | 5.19 | 2.14e-07 | 0.73 | FALSE |