Best TWAS P=3.24e-09 · Best GWAS P=1.24e-09 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Ctsc | isoform ratio | ENSRNOT00000022342 | 0.16 | 2515 | 0.16 | 4.3e-17 | 5.15 | 2.66e-07 | 0.26 | FALSE |
Adipose | Ctsc | isoform ratio | ENSRNOT00000097085 | 0.18 | 2515 | 0.18 | 1.3e-19 | -5.21 | 1.94e-07 | 0.55 | FALSE |
Adipose | Ctsc | intron excision ratio | chr1:142031177:142036233 | 0.05 | 2515 | 0.04 | 6.5e-05 | -5.22 | 1.79e-07 | 0.56 | FALSE |
Adipose | Ctsc | intron excision ratio | chr1:142031177:142045569 | 0.04 | 2515 | 0.02 | 4.7e-03 | 5.11 | 3.28e-07 | 0.42 | FALSE |
BLA | Ctsc | mRNA stability | ENSRNOG00000016496 | 0.05 | 1 | 0.03 | 1.5e-02 | 5.82 | 5.86e-09 | 0.05 | FALSE |
Brain | Grm5 | gene expression | ENSRNOG00000016429 | 0.16 | 6 | 0.15 | 5.3e-14 | 5.35 | 9.00e-08 | 0.68 | FALSE |
Brain | Ctsc | isoform ratio | ENSRNOT00000022342 | 0.03 | 1 | 0.04 | 1.7e-04 | 5.92 | 3.26e-09 | 0.28 | FALSE |
Eye | Ctsc | gene expression | ENSRNOG00000016496 | 0.29 | 1 | 0.15 | 2.9e-03 | -5.61 | 2.08e-08 | 0.06 | FALSE |
IL | Ctsc | gene expression | ENSRNOG00000016496 | 0.3 | 1 | 0.16 | 1.0e-04 | -5.65 | 1.58e-08 | 0.07 | FALSE |
NAcc | Ctsc | gene expression | ENSRNOG00000016496 | 0.12 | 2516 | 0.12 | 3.3e-09 | -5.26 | 1.45e-07 | 0.57 | FALSE |
PL | Grm5 | mRNA stability | ENSRNOG00000016429 | 0.04 | 1 | 0.03 | 1.3e-03 | -5.92 | 3.24e-09 | 0.07 | TRUE |