chr1:140,614,300-142,727,457

Trait: Light reinforcement 2

Best TWAS P=3.24e-09 · Best GWAS P=1.24e-09 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Ctsc isoform ratio ENSRNOT00000022342 0.16 2515 0.16 4.3e-17 5.15 2.66e-07 0.26 FALSE
Adipose Ctsc isoform ratio ENSRNOT00000097085 0.18 2515 0.18 1.3e-19 -5.21 1.94e-07 0.55 FALSE
Adipose Ctsc intron excision ratio chr1:142031177:142036233 0.05 2515 0.04 6.5e-05 -5.22 1.79e-07 0.56 FALSE
Adipose Ctsc intron excision ratio chr1:142031177:142045569 0.04 2515 0.02 4.7e-03 5.11 3.28e-07 0.42 FALSE
BLA Ctsc mRNA stability ENSRNOG00000016496 0.05 1 0.03 1.5e-02 5.82 5.86e-09 0.05 FALSE
Brain Grm5 gene expression ENSRNOG00000016429 0.16 6 0.15 5.3e-14 5.35 9.00e-08 0.68 FALSE
Brain Ctsc isoform ratio ENSRNOT00000022342 0.03 1 0.04 1.7e-04 5.92 3.26e-09 0.28 FALSE
Eye Ctsc gene expression ENSRNOG00000016496 0.29 1 0.15 2.9e-03 -5.61 2.08e-08 0.06 FALSE
IL Ctsc gene expression ENSRNOG00000016496 0.3 1 0.16 1.0e-04 -5.65 1.58e-08 0.07 FALSE
NAcc Ctsc gene expression ENSRNOG00000016496 0.12 2516 0.12 3.3e-09 -5.26 1.45e-07 0.57 FALSE
PL Grm5 mRNA stability ENSRNOG00000016429 0.04 1 0.03 1.3e-03 -5.92 3.24e-09 0.07 TRUE