Best TWAS P = 3.24e-09 · Best GWAS P= 4.13e-09 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| BLA | Hhip | gene expression | Hhip | 0.08 | 1 | 0.09 | 2.6e-05 | 5.34 | 9.10e-08 | 0.1 | FALSE |
| Brain | Anapc10 | gene expression | Anapc10 | 0.08 | 2338 | 0.05 | 9.2e-06 | -5.3 | 1.15e-07 | 0.32 | FALSE |
| NAcc | Anapc10 | gene expression | Anapc10 | 0.02 | 2338 | 0.01 | 2.6e-03 | -5.22 | 1.79e-07 | 0.48 | FALSE |
| NAcc | Anapc10 | isoform ratio | NM_001108445.1 | 0.04 | 9 | 0.03 | 6.4e-05 | 5.85 | 4.90e-09 | 0.64 | FALSE |
| NAcc | Anapc10 | isoform ratio | XM_063278119.1 | 0.04 | 8 | 0.03 | 5.1e-05 | -5.84 | 5.19e-09 | 0.64 | FALSE |
| NAcc | Anapc10 | intron excision ratio | chr19_45058702_45095169 | 0.03 | 4 | 0.01 | 3.6e-03 | 5.22 | 1.76e-07 | 0.34 | FALSE |
| NAcc | Anapc10 | intron excision ratio | chr19_45058702_45103979 | 0.02 | 2338 | 0.02 | 5.3e-04 | -5.38 | 7.31e-08 | 0.62 | FALSE |
| NAcc | LOC134483509 | intron excision ratio | chr19_44764465_44765074 | 0.02 | 2506 | 0.02 | 2.3e-04 | -5.92 | 3.24e-09 | 0.52 | TRUE |
| PL | Anapc10 | gene expression | Anapc10 | 0.05 | 1 | 0.03 | 8.6e-04 | -5.22 | 1.84e-07 | 0.12 | FALSE |
| pVTA | Abce1 | gene expression | Abce1 | 0.13 | 2338 | 0.05 | 1.1e-04 | -5.28 | 1.27e-07 | 0.42 | FALSE |