chr7:26,902,995-30,904,027

Trait: Tail length

Best TWAS P=3.29e-13 · Best GWAS P=2.08e-13 conditioned to NaN

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Elk3 gene expression ENSRNOG00000004367 0.11 2579 0.05 2.5e-06 6.12 9.16e-10 0.29 FALSE
Adipose Hal gene expression ENSRNOG00000004502 0.03 2432 0.01 6.9e-02 -6.62 3.53e-11 0.34 FALSE
Adipose Vezt gene expression ENSRNOG00000006514 0.11 1 0.08 3.2e-09 -5.22 1.81e-07 0 FALSE
Adipose Ndufa12 gene expression ENSRNOG00000007407 0.34 16 0.2 1.0e-21 -5.45 4.91e-08 0.01 FALSE
Adipose Cep83 intron excision ratio chr7:29322957:29325469 0.03 2703 0.02 1.8e-03 -6.11 1.02e-09 0.32 FALSE
Adipose Vezt mRNA stability ENSRNOG00000006514 0.07 2570 0.06 5.0e-07 -6.16 7.08e-10 0.26 FALSE
BLA Ntn4 gene expression ENSRNOG00000005573 0.06 2475 0.03 8.1e-03 5.1 3.46e-07 0.39 FALSE
BLA Plxnc1 gene expression ENSRNOG00000007970 0.17 3125 0.11 2.6e-06 -5.1 3.44e-07 0.01 FALSE
BLA Nudt4 gene expression ENSRNOG00000009094 0.46 64 0.38 1.9e-21 5.73 9.97e-09 0.05 FALSE
BLA Metap2 gene expression ENSRNOG00000021881 0.08 1 0.07 1.9e-04 6.76 1.40e-11 0.18 FALSE
BLA Mir331 gene expression ENSRNOG00000035543 0.06 2366 0.06 5.1e-04 6.65 2.92e-11 0.22 FALSE
BLA Fgd6 gene expression ENSRNOG00000054515 0.11 1 0.13 2.7e-07 -5.62 1.90e-08 0.03 FALSE
BLA Tmcc3 isoform ratio ENSRNOT00000102476 0.1 2424 0.04 3.2e-03 -6.61 3.93e-11 0.39 FALSE
BLA Lta4h intron excision ratio chr7:27997602:27999743 0.07 2332 0.02 2.6e-02 -5.41 6.28e-08 0.3 FALSE
BLA Vezt intron excision ratio chr7:28557619:28560958 0.07 2571 0.01 6.6e-02 5.65 1.60e-08 0.2 FALSE
BLA Tmcc3 intron excision ratio chr7:29100427:29159418 0.12 10 0.11 1.0e-06 5.36 8.35e-08 0.23 FALSE
BLA Tmcc3 intron excision ratio chr7:29133627:29159418 0.07 2424 0.04 4.3e-03 -6.22 4.96e-10 0.38 FALSE
BLA Vezt mRNA stability ENSRNOG00000006514 0.4 1 0.42 4.0e-24 6.01 1.88e-09 0.19 FALSE
BLA Plxnc1 mRNA stability ENSRNOG00000007970 0.11 1 0.11 3.0e-06 6.72 1.77e-11 0.47 FALSE
Brain Cdk17 gene expression ENSRNOG00000004148 0.12 78 0.07 1.8e-07 5.36 8.39e-08 0 FALSE
Brain Lta4h gene expression ENSRNOG00000004494 0.05 1 0.04 9.1e-05 6.15 7.74e-10 0.04 FALSE
Brain Vezt gene expression ENSRNOG00000006514 0.24 2571 0.23 1.2e-20 -5.95 2.66e-09 0.42 FALSE
Brain Ndufa12 gene expression ENSRNOG00000007407 0.49 2574 0.34 6.1e-32 -5.64 1.72e-08 0.01 FALSE
Brain Socs2 gene expression ENSRNOG00000008965 0.22 118 0.11 5.0e-10 6.46 1.03e-10 0.93 FALSE
Brain Nudt4 gene expression ENSRNOG00000009094 0.86 57 0.74 8.6e-100 5.62 1.95e-08 0 FALSE
Brain Fgd6 gene expression ENSRNOG00000054515 0.16 1 0.23 8.6e-21 -5.71 1.10e-08 0.04 FALSE
Brain Lta4h mRNA stability ENSRNOG00000004494 0.05 2332 0.03 9.8e-04 5.77 8.14e-09 0.6 FALSE
Brain Vezt mRNA stability ENSRNOG00000006514 0.2 28 0.2 1.6e-18 5.72 1.04e-08 0.3 TRUE
Eye Lta4h gene expression ENSRNOG00000004494 0.41 24 0.07 3.0e-02 5.62 1.93e-08 0.41 FALSE
Eye Fgd6 gene expression ENSRNOG00000054515 0.52 2560 0.15 2.3e-03 -6.22 4.95e-10 0.17 FALSE
Eye Elk3 isoform ratio ENSRNOT00000005911 0.36 2579 0.1 1.2e-02 -6.65 2.92e-11 0.45 FALSE
IL Vezt gene expression ENSRNOG00000006514 0.29 4 0.26 7.2e-07 -6.51 7.43e-11 0.38 FALSE
IL Vezt mRNA stability ENSRNOG00000006514 0.23 2568 0.1 2.4e-03 5.96 2.47e-09 0.26 FALSE
LHb Ntn4 gene expression ENSRNOG00000005573 0.21 2473 0.06 1.6e-02 -5.73 9.92e-09 0.49 FALSE
LHb Plxnc1 gene expression ENSRNOG00000007970 0.41 3118 0.22 7.2e-06 -6.47 9.56e-11 0.23 FALSE
LHb Cdk17 isoform ratio ENSRNOT00000109496 0.18 2984 0.11 1.4e-03 5.24 1.58e-07 0.26 FALSE
LHb Vezt mRNA stability ENSRNOG00000006514 0.4 84 0.21 1.1e-05 6.05 1.48e-09 0.4 FALSE
Liver Amdhd1 gene expression ENSRNOG00000005266 0.37 40 0.34 1.7e-39 -5.74 9.36e-09 0 FALSE
Liver Ntn4 gene expression ENSRNOG00000005573 0.1 2475 0.06 4.3e-07 -6.6 4.15e-11 0.54 FALSE
Liver Ndufa12 gene expression ENSRNOG00000007407 0.42 320 0.46 1.8e-56 -5.39 7.05e-08 0.01 FALSE
Liver Nudt4 gene expression ENSRNOG00000009094 0.1 21 0.06 4.1e-07 -5.16 2.42e-07 0.01 TRUE
Liver Ube2n gene expression ENSRNOG00000058053 0.03 7 0.02 1.1e-03 -5.67 1.41e-08 0.01 FALSE
Liver Mrpl42 intron excision ratio chr7:30140191:30141604 0.03 32 0.02 2.2e-03 5.44 5.28e-08 0.06 FALSE
Liver Lta4h mRNA stability ENSRNOG00000004494 0.11 1 0.11 6.2e-12 5.99 2.09e-09 0.1 FALSE
Liver Socs2 mRNA stability ENSRNOG00000008965 0.04 3463 0.02 5.8e-03 -6.12 9.15e-10 0.08 FALSE
NAcc AABR07056633.1 alternative TSS ENSRNOT00000104436 0.04 2952 0.03 1.5e-03 -5.13 2.88e-07 0.04 FALSE
NAcc Elk3 gene expression ENSRNOG00000004367 0.04 2578 0.02 1.6e-02 6.2 5.51e-10 0.24 FALSE
NAcc Lta4h gene expression ENSRNOG00000004494 0.04 1 0.05 8.4e-05 6.42 1.38e-10 0.11 FALSE
NAcc Vezt gene expression ENSRNOG00000006514 0.1 2569 0.14 1.4e-10 -5.75 8.73e-09 0.03 FALSE
NAcc Plxnc1 gene expression ENSRNOG00000007970 0.12 6 0.13 1.0e-09 -6.19 6.10e-10 0.06 TRUE
NAcc Tmcc3 isoform ratio ENSRNOT00000102476 0.05 2420 0.04 8.4e-04 -5.12 3.04e-07 0.26 FALSE
NAcc Tmcc3 intron excision ratio chr7:29133627:29159418 0.05 2420 0.05 1.4e-04 -6.17 6.70e-10 0.4 FALSE
NAcc Lta4h mRNA stability ENSRNOG00000004494 0.06 7 0.06 3.2e-05 6.04 1.58e-09 0.6 FALSE
NAcc Vezt mRNA stability ENSRNOG00000006514 0.14 10 0.11 1.5e-08 5.7 1.20e-08 0.15 FALSE
OFC Vezt gene expression ENSRNOG00000006514 0.38 117 0.28 3.0e-07 -6.61 3.89e-11 0.6 FALSE
OFC Ndufa12 gene expression ENSRNOG00000007407 0.19 1 0.16 1.1e-04 -6.2 5.50e-10 0.08 FALSE
OFC Socs2 isoform ratio ENSRNOT00000103867 0.33 1 0.15 2.3e-04 -5.78 7.50e-09 0.05 FALSE
OFC Vezt mRNA stability ENSRNOG00000006514 0.24 2568 0.14 3.2e-04 6.25 4.19e-10 0.36 FALSE
PL Socs2 alternative polyA ENSRNOT00000011948 0.1 1 0.05 1.5e-04 6.57 4.90e-11 0.26 FALSE
PL Socs2 alternative polyA ENSRNOT00000103867 0.09 16 0.04 2.5e-04 -6.48 8.90e-11 0.14 FALSE
PL Vezt gene expression ENSRNOG00000006514 0.35 7 0.41 4.8e-33 -5.75 8.67e-09 0.03 FALSE
PL Ndufa12 gene expression ENSRNOG00000007407 0.07 18 0.07 1.0e-05 -5.99 2.13e-09 0.52 TRUE
PL Socs2 gene expression ENSRNOG00000008965 0.05 1 0.04 9.1e-04 7.28 3.29e-13 0.44 TRUE
PL Nudt4 gene expression ENSRNOG00000009094 0.68 84 0.55 1.1e-49 5.89 3.91e-09 0 FALSE
PL Fgd6 gene expression ENSRNOG00000054515 0.07 7 0.1 5.4e-08 -5.44 5.25e-08 0.19 FALSE
PL Socs2 isoform ratio ENSRNOT00000011948 0.1 1 0.05 1.4e-04 5.99 2.11e-09 0.02 TRUE
PL Socs2 isoform ratio ENSRNOT00000103867 0.1 1 0.05 1.3e-04 -5.99 2.11e-09 0.02 FALSE
PL Vezt mRNA stability ENSRNOG00000006514 0.27 1 0.38 1.6e-30 5.94 2.77e-09 0.14 FALSE
PL Plxnc1 mRNA stability ENSRNOG00000007970 0.05 1 0.05 1.2e-04 6.04 1.50e-09 0.03 FALSE
PL Cradd mRNA stability ENSRNOG00000008507 0.09 1 0.07 2.3e-06 6.65 2.94e-11 0.34 FALSE