Hub : Traits : Left kidney weight : ← : →

chr5:148,559,083-150,187,748

Trait: Left kidney weight

Best TWAS P=1.07e-09 · Best GWAS P=1.07e-09 conditioned to 1.45e-01

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Ece1	alternative TSS	ENSRNOT00000102078	0.03	920	0.03	4.3e-04	5.28	1.31e-07	0.44	FALSE
Adipose	Alpl	gene expression	ENSRNOG00000013954	0.08	995	0.11	1.3e-12	5.28	1.31e-07	0.43	FALSE
Adipose	Ece1	gene expression	ENSRNOG00000014241	0.02	1	0.03	8.2e-04	-5.74	9.70e-09	0.1	FALSE
Adipose	AABR07073181.1	gene expression	ENSRNOG00000021437	0.06	1	0.09	4.5e-10	5.26	1.40e-07	0.34	FALSE
Adipose	Ldlrad2	gene expression	ENSRNOG00000033503	0.02	1	0.02	1.5e-03	5.23	1.68e-07	0.03	FALSE
Adipose	Usp48	isoform ratio	ENSRNOT00000031855	0.21	1	0.34	1.6e-38	5.28	1.32e-07	0.35	FALSE
Adipose	Usp48	isoform ratio	ENSRNOT00000077933	0.19	15	0.26	1.1e-28	-5.33	9.97e-08	0.41	FALSE
Adipose	Ece1	isoform ratio	ENSRNOT00000102078	0.04	920	0.03	1.2e-04	5.28	1.30e-07	0.45	FALSE
Adipose	AABR07073181.1	isoform ratio	ENSRNOT00000039341	0.02	1371	0.01	2.6e-02	5.21	1.86e-07	0.36	FALSE
Adipose	AABR07073181.1	isoform ratio	ENSRNOT00000098496	0.22	28	0.33	3.1e-37	5.26	1.41e-07	0.41	FALSE
Adipose	AABR07073181.1	isoform ratio	ENSRNOT00000105209	0.23	1371	0.36	6.4e-42	-5.28	1.32e-07	0.39	FALSE
Adipose	ENSRNOG00000069740	isoform ratio	ENSRNOT00000120115	0.04	1249	0.03	5.6e-04	-5.27	1.33e-07	0.69	FALSE
Adipose	Usp48	intron excision ratio	chr5:149800971:149810309	0.05	1259	0.04	3.7e-05	-5.17	2.36e-07	0.64	FALSE
Adipose	Usp48	intron excision ratio	chr5:149810429:149811690	0.05	1259	0.04	2.4e-05	5.12	3.04e-07	0.66	FALSE
Adipose	Usp48	intron excision ratio	chr5:149833625:149836154	0.25	25	0.4	1.9e-47	-5.47	4.49e-08	0.38	FALSE
Adipose	Usp48	intron excision ratio	chr5:149833826:149836154	0.26	27	0.4	1.9e-47	5.47	4.56e-08	0.38	FALSE
Adipose	Ece1	intron excision ratio	chr5:150126242:150133824	0.03	1	0.03	3.8e-04	-5.26	1.44e-07	0.04	FALSE
Adipose	Ece1	intron excision ratio	chr5:150133272:150133824	0.03	1	0.03	4.0e-04	5.26	1.44e-07	0.04	FALSE
Adipose	AABR07073181.1	intron excision ratio	chr5:149716950:149718780	0.18	1371	0.23	6.6e-25	5.17	2.29e-07	0.44	FALSE
Adipose	AABR07073181.1	intron excision ratio	chr5:149716950:149719207	0.26	1371	0.37	1.1e-43	-5.24	1.57e-07	0.4	FALSE
Adipose	AABR07073181.1	intron excision ratio	chr5:149718830:149719207	0.22	1	0.32	5.0e-36	5.26	1.40e-07	0.34	FALSE
BLA	Ece1	gene expression	ENSRNOG00000014241	0.14	920	0.1	6.0e-06	-5.29	1.24e-07	0.47	FALSE
BLA	Eif4g3	gene expression	ENSRNOG00000014368	0.07	807	0.04	5.9e-03	-5.27	1.38e-07	0.4	FALSE
BLA	Usp48	isoform ratio	ENSRNOT00000031855	0.2	1	0.21	1.0e-11	5.29	1.21e-07	0.37	FALSE
BLA	Usp48	isoform ratio	ENSRNOT00000077933	0.19	1	0.25	1.4e-13	-5.31	1.09e-07	0.39	FALSE
BLA	Usp48	intron excision ratio	chr5:149833625:149836154	0.5	1259	0.41	1.3e-23	-5.34	9.06e-08	0.45	FALSE
BLA	Usp48	intron excision ratio	chr5:149833826:149836154	0.52	1259	0.42	6.4e-24	5.34	9.07e-08	0.46	FALSE
BLA	Usp48	mRNA stability	ENSRNOG00000013602	0.12	1	0.14	4.4e-08	5.29	1.20e-07	0.35	FALSE
Brain	Rap1gap	alternative polyA	ENSRNOT00000046802	0.05	1	0.08	3.2e-08	-5.91	3.39e-09	0.95	FALSE
Brain	Rap1gap	alternative polyA	ENSRNOT00000116365	0.05	1	0.08	6.0e-08	5.91	3.39e-09	0.95	FALSE
Brain	Alpl	gene expression	ENSRNOG00000013954	0.07	3	0.09	2.2e-08	5.87	4.43e-09	0.47	FALSE
Brain	Usp48	isoform ratio	ENSRNOT00000031855	0.33	441	0.48	1.1e-50	5.34	9.27e-08	0.39	FALSE
Brain	Usp48	isoform ratio	ENSRNOT00000077933	0.32	9	0.48	6.5e-50	-5.91	3.41e-09	0.46	FALSE
Brain	Usp48	isoform ratio	ENSRNOT00000112285	0.09	1259	0.13	3.9e-12	-5.28	1.29e-07	0.4	FALSE
Brain	Usp48	intron excision ratio	chr5:149833625:149836154	0.43	444	0.58	1.7e-65	-5.29	1.23e-07	0.39	FALSE
Brain	Usp48	intron excision ratio	chr5:149833826:149836154	0.43	21	0.58	5.5e-65	5.27	1.35e-07	0.39	FALSE
Brain	Rap1gap	intron excision ratio	chr5:149933815:149934662	0.02	1	0.02	9.9e-03	-5.9	3.54e-09	0.08	FALSE
Brain	Rap1gap	mRNA stability	ENSRNOG00000013825	0.09	1124	0.12	4.3e-11	-5.22	1.83e-07	0.4	FALSE
Eye	Wnt4	gene expression	ENSRNOG00000013166	0.56	1	0	2.9e-01	5.89	3.79e-09	0.06	FALSE
Eye	Usp48	gene expression	ENSRNOG00000013602	0.67	1259	0.09	1.8e-02	5.38	7.53e-08	0.36	FALSE
Eye	Usp48	isoform ratio	ENSRNOT00000031855	0.68	1259	0.16	2.0e-03	5.34	9.05e-08	0.43	FALSE
Eye	Usp48	isoform ratio	ENSRNOT00000077933	0.67	1259	0.17	1.4e-03	-5.26	1.45e-07	0.46	FALSE
Eye	Usp48	intron excision ratio	chr5:149833625:149836154	0.49	1259	0.08	2.5e-02	-5.36	8.45e-08	0.28	FALSE
Eye	Usp48	intron excision ratio	chr5:149833826:149836154	0.49	1259	0.05	5.6e-02	5.33	9.57e-08	0.28	FALSE
IL	Usp48	gene expression	ENSRNOG00000013602	0.11	1	0.11	1.5e-03	5.44	5.25e-08	0.06	FALSE
IL	Rap1gap	gene expression	ENSRNOG00000013825	0.11	1	0.12	9.4e-04	5.29	1.21e-07	0.06	FALSE
IL	Usp48	isoform ratio	ENSRNOT00000031855	0.21	1	0.19	2.1e-05	5.29	1.23e-07	0.07	FALSE
IL	Usp48	isoform ratio	ENSRNOT00000077933	0.29	3	0.31	3.0e-08	-5.29	1.22e-07	0.53	FALSE
IL	Usp48	intron excision ratio	chr5:149833625:149836154	0.42	5	0.47	8.6e-13	-5.28	1.28e-07	0.54	FALSE
IL	Usp48	intron excision ratio	chr5:149833826:149836154	0.42	5	0.46	1.1e-12	5.27	1.34e-07	0.54	FALSE
LHb	Rap1gap	gene expression	ENSRNOG00000013825	0.28	1	0.29	1.3e-07	5.28	1.31e-07	0.15	FALSE
LHb	Zbtb40	gene expression	ENSRNOG00000022039	0.21	1221	0.2	1.8e-05	-5.09	3.51e-07	0.7	FALSE
LHb	Usp48	isoform ratio	ENSRNOT00000031855	0.27	1253	0.29	1.1e-07	5.32	1.03e-07	0.53	FALSE
LHb	Usp48	intron excision ratio	chr5:149833625:149836154	0.45	1	0.51	4.0e-14	-5.28	1.32e-07	0.35	FALSE
LHb	Usp48	intron excision ratio	chr5:149833826:149836154	0.43	1253	0.49	1.6e-13	5.33	9.91e-08	0.54	FALSE
Liver	Rap1gap	gene expression	ENSRNOG00000013825	0.2	194	0.22	1.1e-23	5.86	4.67e-09	0.51	FALSE
Liver	Alpl	gene expression	ENSRNOG00000013954	0.17	995	0.26	2.0e-28	5.22	1.80e-07	0.43	FALSE
Liver	Ece1	gene expression	ENSRNOG00000014241	0.07	1	0.02	1.5e-03	-5.9	3.66e-09	0.31	FALSE
Liver	AABR07073181.1	gene expression	ENSRNOG00000021437	0.04	1	0.03	7.2e-04	5.26	1.44e-07	0.09	FALSE
Liver	Usp48	isoform ratio	ENSRNOT00000031855	0.06	1	0.11	5.8e-12	5.27	1.36e-07	0.34	FALSE
Liver	Usp48	isoform ratio	ENSRNOT00000077933	0.18	1	0.22	1.5e-23	-5.23	1.68e-07	0.3	FALSE
Liver	Usp48	intron excision ratio	chr5:149833625:149836154	0.3	1	0.41	4.4e-49	-5.23	1.68e-07	0.3	FALSE
Liver	Usp48	intron excision ratio	chr5:149833826:149836154	0.28	1	0.4	6.3e-47	5.23	1.68e-07	0.3	FALSE
NAcc	Rap1gap	alternative TSS	ENSRNOT00000046802	0.22	1	0.21	1.7e-15	5.29	1.23e-07	0.37	FALSE
NAcc	Usp48	gene expression	ENSRNOG00000013602	0.07	1257	0.06	2.2e-05	-5.13	2.93e-07	0.53	FALSE
NAcc	Rap1gap	gene expression	ENSRNOG00000013825	0.04	1	0.03	5.1e-03	-5.85	5.04e-09	0.16	FALSE
NAcc	Ece1	gene expression	ENSRNOG00000014241	0.19	920	0.1	9.3e-08	-5.21	1.84e-07	0.47	FALSE
NAcc	Usp48	isoform ratio	ENSRNOT00000077933	0.3	29	0.34	1.9e-26	-5.23	1.66e-07	0.37	FALSE
NAcc	Usp48	isoform ratio	ENSRNOT00000112285	0.05	1257	0.03	2.9e-03	-5.12	3.07e-07	0.44	FALSE
NAcc	Rap1gap	isoform ratio	ENSRNOT00000046802	0.1	1	0.1	4.6e-08	5.29	1.23e-07	0.49	FALSE
NAcc	Rap1gap	isoform ratio	ENSRNOT00000098228	0.14	1	0.14	1.5e-10	-5.29	1.23e-07	0.48	FALSE
NAcc	Usp48	intron excision ratio	chr5:149833625:149836154	0.5	49	0.56	6.4e-50	-5.25	1.49e-07	0.37	FALSE
NAcc	Usp48	intron excision ratio	chr5:149833826:149836154	0.42	42	0.55	4.0e-48	5.25	1.51e-07	0.37	FALSE
NAcc	Rap1gap	intron excision ratio	chr5:149914780:149920646	0.16	1	0.15	4.1e-11	5.17	2.38e-07	0.23	FALSE
NAcc	Rap1gap	intron excision ratio	chr5:149918394:149920646	0.17	1	0.15	3.3e-11	-5.17	2.38e-07	0.23	FALSE
NAcc	Usp48	mRNA stability	ENSRNOG00000013602	0.04	1	0.03	2.1e-03	6.1	1.07e-09	0.22	TRUE
NAcc	Rap1gap	mRNA stability	ENSRNOG00000013825	0.07	1123	0.07	5.5e-06	-5.17	2.40e-07	0.6	FALSE
OFC	Rap1gap	gene expression	ENSRNOG00000013825	0.15	1120	0.05	2.9e-02	5.19	2.13e-07	0.35	FALSE
OFC	Ece1	gene expression	ENSRNOG00000014241	0.41	917	0.11	1.4e-03	-5.19	2.07e-07	0.42	FALSE
OFC	Usp48	isoform ratio	ENSRNOT00000031855	0.21	1	0.2	1.3e-05	5.28	1.32e-07	0.08	FALSE
OFC	Usp48	isoform ratio	ENSRNOT00000077933	0.21	1	0.25	1.3e-06	-5.28	1.31e-07	0.1	FALSE
OFC	Usp48	intron excision ratio	chr5:149833625:149836154	0.47	1	0.41	6.6e-11	-5.31	1.11e-07	0.36	FALSE
OFC	Usp48	intron excision ratio	chr5:149833826:149836154	0.47	1	0.42	4.5e-11	5.31	1.11e-07	0.35	FALSE
OFC	Eif4g3	mRNA stability	ENSRNOG00000014368	0.2	1	0.12	1.1e-03	-5.26	1.44e-07	0.06	FALSE
PL	Usp48	gene expression	ENSRNOG00000013602	0.08	1	0.09	3.3e-07	6.1	1.07e-09	0.98	FALSE
PL	Rap1gap	gene expression	ENSRNOG00000013825	0.06	1	0.04	1.1e-03	5.8	6.70e-09	0.07	FALSE
PL	Ece1	gene expression	ENSRNOG00000014241	0.08	920	0.05	8.5e-05	-5.28	1.27e-07	0.48	FALSE
PL	Usp48	isoform ratio	ENSRNOT00000031855	0.16	1	0.23	8.4e-18	5.32	1.03e-07	0.41	FALSE
PL	Usp48	isoform ratio	ENSRNOT00000077933	0.27	37	0.36	3.2e-28	-5.23	1.67e-07	0.4	FALSE
PL	Usp48	intron excision ratio	chr5:149833625:149836154	0.41	50	0.47	1.9e-39	-5.24	1.61e-07	0.38	FALSE
PL	Usp48	intron excision ratio	chr5:149833826:149836154	0.37	191	0.44	7.0e-37	5.23	1.73e-07	0.38	FALSE
PL	Usp48	mRNA stability	ENSRNOG00000013602	0.07	1257	0.05	1.1e-04	5.27	1.38e-07	0.46	FALSE
PL	Rap1gap	mRNA stability	ENSRNOG00000013825	0.05	1	0.05	6.4e-05	-5.8	6.70e-09	0.52	FALSE