Best TWAS P=1.10e-07 · Best GWAS P=7.60e-08 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
BLA | Septin8 | alternative polyA | XM_006246268.2 | 0.27 | 1 | 0.26 | 3.6e-14 | -5.3 | 1.15e-07 | 0.97 | FALSE |
BLA | Septin8 | alternative polyA | NM_001414347.1 | 0.28 | 13 | 0.25 | 7.5e-14 | 5.24 | 1.64e-07 | 0.74 | FALSE |
BLA | Septin8 | isoform ratio | XM_017597256.2 | 0.09 | 10 | 0.04 | 3.2e-03 | -5.19 | 2.07e-07 | 0.72 | FALSE |
BLA | Septin8 | intron excision ratio | chr10_37701775_37712417 | 0.07 | 2 | 0.04 | 3.9e-03 | 5.3 | 1.14e-07 | 0.67 | FALSE |
BLA | Shroom1 | intron excision ratio | chr10_37628478_37629428 | 0.2 | 1 | 0.16 | 5.4e-09 | 5.3 | 1.15e-07 | 0.96 | FALSE |
Liver | Slc22a21 | gene expression | Slc22a21 | 0.03 | 1 | 0.02 | 3.3e-03 | 5.3 | 1.15e-07 | 0.07 | FALSE |
Liver | Slc22a4 | gene expression | Slc22a4 | 0.04 | 1 | 0.03 | 4.4e-04 | 5.3 | 1.15e-07 | 0.39 | FALSE |
NAcc | Pdlim4 | mRNA stability | Pdlim4 | 0.02 | 1 | 0.02 | 1.5e-03 | -5.31 | 1.10e-07 | 0.43 | TRUE |
PL | Septin8 | intron excision ratio | chr10_37701775_37706000 | 0.06 | 1 | 0.05 | 1.7e-06 | 5.31 | 1.10e-07 | 0.94 | FALSE |