Hub : Traits : Epididymis fat weight : ← : →

chr3:65,822,892-71,118,704

Trait: Epididymis fat weight

Best TWAS P = 3.71e-10 · Best GWAS P= 1.88e-10 conditioned to 1.00e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Ifih1	alternative polyA	XM_063284355.1	0.07	1648	0.04	6.4e-05	5.23	1.68e-07	0.54	FALSE
Adipose	Fign	alternative TSS	XM_063283273.1	0.04	2493	0.02	2.7e-03	6.08	1.20e-09	0.48	FALSE
Adipose	Tank	alternative TSS	XM_006234273.5	0.04	1	0.02	2.8e-03	-5.56	2.65e-08	0.17	FALSE
Adipose	Tank	alternative TSS	XM_006234273.5	0.04	1	0.02	3.6e-03	-5.57	2.52e-08	0.15	FALSE
Adipose	Fign	gene expression	Fign	0.11	1	0.09	2.0e-10	-6.27	3.71e-10	0.87	TRUE
Adipose	Grb14	gene expression	Grb14	0.33	35	0.23	1.1e-24	-5.44	5.34e-08	0.18	FALSE
Adipose	Tank	gene expression	Tank	0.21	1462	0.13	5.5e-14	-5.32	1.02e-07	0.83	FALSE
Adipose	Ifih1	isoform ratio	XM_039105671.2	0.06	90	0.06	2.4e-07	5.35	8.94e-08	0.42	FALSE
Adipose	Tank	isoform ratio	XM_006234274.4	0.08	1	0.03	2.9e-04	5.56	2.65e-08	0.68	FALSE
Adipose	Ifih1	mRNA stability	Ifih1	0.13	1648	0.14	4.3e-15	-5.22	1.79e-07	0.38	FALSE
BLA	Cobll1	gene expression	Cobll1	0.08	41	0.05	1.3e-03	5.6	2.10e-08	0.53	FALSE
BLA	Gca	isoform ratio	NM_001106483.4	0.38	1622	0.37	6.5e-21	5.36	8.42e-08	0.5	FALSE
BLA	Gca	isoform ratio	XM_039104486.2	0.46	1622	0.44	1.4e-25	-5.32	1.02e-07	0.43	FALSE
BLA	Gca	intron excision ratio	chr3_67734856_67736020	0.3	1	0.21	1.6e-11	5.35	8.76e-08	0.72	FALSE
BLA	Gca	intron excision ratio	chr3_67734856_67736716	0.34	1	0.28	3.6e-15	-5.35	8.76e-08	0.72	FALSE
BLA	Grb14	mRNA stability	Grb14	0.37	38	0.38	1.5e-21	5.5	3.90e-08	0.24	FALSE
Brain	Ifih1	alternative TSS	XM_039105671.2	0.06	1	0.06	4.6e-06	5.3	1.16e-07	0.56	FALSE
Brain	Cobll1	gene expression	Cobll1	0.05	2442	0.05	1.6e-05	5.69	1.29e-08	0.78	FALSE
Brain	Grb14	gene expression	Grb14	0.62	390	0.6	4.9e-70	-5.73	9.93e-09	0.24	FALSE
Brain	Ifih1	gene expression	Ifih1	0.14	5	0.22	9.6e-21	-5.29	1.21e-07	0.37	TRUE
Brain	LOC108350383	gene expression	LOC108350383	0.04	1	0.05	2.7e-05	-5.23	1.72e-07	0.05	FALSE
Brain	Gca	isoform ratio	NM_001106483.4	0.19	11	0.32	1.5e-30	5.4	6.81e-08	0.38	FALSE
Brain	Grb14	isoform ratio	NM_031623.2	0.06	2786	0.05	2.9e-05	5.33	9.62e-08	0.62	TRUE
Brain	Grb14	intron excision ratio	chr3_69997205_70000169	0.02	2786	0.01	2.1e-02	5.65	1.64e-08	0.44	FALSE
Brain	LOC108350383	intron excision ratio	chr3_68231297_68231717	0.08	1304	0.08	6.6e-08	-5.56	2.72e-08	0.39	FALSE
Brain	LOC108350383	intron excision ratio	chr3_68231369_68231717	0.04	1304	0.03	1.2e-03	5.48	4.24e-08	0.37	FALSE
Brain	Gca	mRNA stability	Gca	0.12	1	0.15	4.2e-14	-5.23	1.72e-07	0.57	FALSE
IC	Grb14	alternative TSS	XM_039105749.2	0.1	2786	0.02	3.5e-02	-5.52	3.39e-08	0.48	FALSE
IC	Cobll1	gene expression	Cobll1	0.09	2442	0.01	8.1e-02	5.22	1.81e-07	0.48	FALSE
IC	Kcnh7	gene expression	Kcnh7	0.12	1304	0.1	5.3e-05	5.23	1.66e-07	0.16	FALSE
IC	Tank	gene expression	Tank	0.15	1	0.06	2.2e-03	5.36	8.34e-08	0.07	FALSE
IC	Grb14	isoform ratio	XM_039105749.2	0.08	2786	0.01	1.1e-01	-5.53	3.26e-08	0.39	FALSE
IC	LOC108350383	intron excision ratio	chr3_68231297_68231717	0.13	1	0.08	2.6e-04	-5.46	4.90e-08	0.1	FALSE
IC	Kcnh7	mRNA stability	Kcnh7	0.1	1304	0.04	7.4e-03	5.28	1.30e-07	0.33	TRUE
IL	Fign	alternative TSS	XM_063283273.1	0.2	1	0.11	1.4e-03	5.21	1.93e-07	0.05	FALSE
IL	Fign	gene expression	Fign	0.18	2493	0.07	8.6e-03	-5.97	2.31e-09	0.31	FALSE
IL	Gca	isoform ratio	XM_039104486.2	0.35	1622	0.19	2.6e-05	-5.26	1.46e-07	0.44	FALSE
IL	Gca	intron excision ratio	chr3_67734856_67736020	0.29	1622	0.09	3.5e-03	5.22	1.75e-07	0.42	FALSE
IL	Gca	intron excision ratio	chr3_67734856_67736716	0.29	1622	0.09	3.3e-03	-5.22	1.82e-07	0.41	FALSE
IL	Gca	mRNA stability	Gca	0.26	1	0.13	5.3e-04	-5.26	1.43e-07	0.06	FALSE
IL	Grb14	mRNA stability	Grb14	0.73	26	0.43	1.2e-11	5.44	5.34e-08	0.25	FALSE
IL	Tank	mRNA stability	Tank	0.3	1462	0.06	1.4e-02	5.32	1.03e-07	0.46	TRUE
LHb	Grb14	gene expression	Grb14	0.34	1	0.22	5.3e-06	-5.75	8.76e-09	0.1	FALSE
LHb	Cobll1	mRNA stability	Cobll1	0.22	1	0.04	3.2e-02	-5.48	4.18e-08	0.05	FALSE
LHb	Grb14	mRNA stability	Grb14	0.4	1	0.25	9.7e-07	5.32	1.06e-07	0.06	FALSE
Liver	LOC134486366	alternative TSS	XR_010065195.1	0.05	1	0.04	1.7e-05	-5.4	6.55e-08	0.03	FALSE
Liver	LOC134486366	alternative TSS	XR_010065197.1	0.05	1	0.04	2.9e-05	5.4	6.55e-08	0.03	FALSE
Liver	Fign	gene expression	Fign	0.06	1	0.05	3.9e-06	-6.11	9.72e-10	0.59	FALSE
Liver	Slc38a11	gene expression	Slc38a11	0.07	1	0.03	9.8e-05	5.82	5.94e-09	0.24	FALSE
Liver	Grb14	mRNA stability	Grb14	0.39	12	0.4	2.1e-47	5.33	9.88e-08	0.19	FALSE
NAcc	Tank	alternative polyA	XM_006234273.5	0.05	10	0.02	4.5e-04	5.43	5.60e-08	0.78	FALSE
NAcc	Tank	alternative polyA	XM_039104358.2	0.12	1	0.06	2.1e-09	-5.39	7.23e-08	0.8	FALSE
NAcc	Fign	alternative TSS	XM_008761889.4	0.01	1	0.02	5.7e-04	-5.55	2.85e-08	0.03	FALSE
NAcc	Grb14	alternative TSS	NM_031623.2	0.06	2786	0.06	3.7e-09	5.61	2.01e-08	0.76	FALSE
NAcc	Cobll1	gene expression	Cobll1	0.03	5	0.05	2.4e-08	6.09	1.14e-09	0.82	TRUE
NAcc	Fign	gene expression	Fign	0.04	26	0.05	4.5e-08	6.24	4.43e-10	0.56	FALSE
NAcc	LOC134486367	gene expression	LOC134486367	0.12	18	0.14	2.5e-20	5.91	3.50e-09	0.69	FALSE
NAcc	Cobll1	isoform ratio	XM_039106332.2	0.02	1	0.02	1.3e-03	-5.95	2.75e-09	0.21	FALSE
NAcc	Grb14	isoform ratio	NM_031623.2	0.08	2786	0.06	3.5e-10	5.42	6.00e-08	0.78	FALSE
NAcc	LOC134486367	isoform ratio	XR_010065198.1	0.07	2343	0.06	6.1e-10	5.3	1.18e-07	0.51	FALSE
NAcc	Tank	isoform ratio	XM_039104358.2	0.1	19	0.06	2.8e-09	-5.31	1.08e-07	0.82	FALSE
NAcc	Grb14	intron excision ratio	chr3_70017203_70090309	0.04	2786	0.03	8.2e-06	5.43	5.54e-08	0.72	FALSE
NAcc	Tank	intron excision ratio	chr3_66571619_66573417	0.04	1	0.03	3.8e-05	-5.51	3.57e-08	0.83	FALSE
NAcc	Tank	intron excision ratio	chr3_66573535_66574956	0.05	5	0.03	5.2e-05	-5.44	5.24e-08	0.81	FALSE
NAcc	Slc4a10	mRNA stability	Slc4a10	0.02	1	0.03	8.7e-05	-5.26	1.45e-07	0.16	FALSE
OFC	Fap	gene expression	Fap	0.14	1732	0.11	1.7e-03	5.27	1.39e-07	0.34	FALSE
OFC	Fign	gene expression	Fign	0.33	2493	0.18	3.9e-05	-6.08	1.21e-09	0.38	FALSE
OFC	Grb14	gene expression	Grb14	0.33	55	0.2	1.7e-05	-5.57	2.59e-08	0.57	FALSE
OFC	Gca	isoform ratio	NM_001106483.4	0.55	1622	0.38	5.3e-10	5.28	1.26e-07	0.42	FALSE
OFC	Gca	isoform ratio	XM_039104486.2	0.54	1622	0.37	7.6e-10	-5.29	1.21e-07	0.42	TRUE
OFC	Gca	intron excision ratio	chr3_67734856_67736020	0.41	1	0.38	4.7e-10	5.26	1.43e-07	0.52	FALSE
OFC	Gca	intron excision ratio	chr3_67734856_67736716	0.46	1	0.41	8.5e-11	-5.26	1.43e-07	0.56	FALSE
OFC	Gca	mRNA stability	Gca	0.2	1	0.17	6.7e-05	-5.46	4.80e-08	0.13	FALSE
PL	Fap	gene expression	Fap	0.05	1732	0.05	3.3e-06	5.26	1.41e-07	0.45	FALSE
PL	Gca	gene expression	Gca	0.08	22	0.1	1.1e-10	-5.44	5.43e-08	0.45	FALSE
PL	LOC108350383	gene expression	LOC108350383	0.03	1304	0.03	8.5e-04	-5.22	1.76e-07	0.18	FALSE
PL	Tank	gene expression	Tank	0.04	1	0.03	3.1e-04	5.46	4.80e-08	0.2	FALSE
PL	Gca	isoform ratio	XM_063283272.1	0.03	1622	0.03	2.2e-04	5.24	1.59e-07	0.43	FALSE
PL	Slc4a10	intron excision ratio	chr3_67354934_67357618	0.05	1	0.05	6.9e-06	-5.32	1.03e-07	0.52	FALSE
PL	Slc4a10	intron excision ratio	chr3_67357734_67358508	0.03	1	0.03	8.5e-04	5.25	1.55e-07	0.06	FALSE
pVTA	Cobll1	gene expression	Cobll1	0.08	1	0.07	1.2e-06	5.57	2.62e-08	0.5	FALSE
pVTA	Grb14	gene expression	Grb14	0.6	117	0.39	1.8e-33	-5.34	9.34e-08	0.8	TRUE
pVTA	Gca	isoform ratio	NM_001106483.4	0.04	1622	0.01	1.9e-02	5.29	1.19e-07	0.42	FALSE
pVTA	Gca	isoform ratio	XM_039104486.2	0.07	1622	0.07	2.2e-06	-5.22	1.81e-07	0.41	FALSE
pVTA	Gca	intron excision ratio	chr3_67734856_67736020	0.05	1622	0.04	4.9e-04	5.22	1.79e-07	0.42	FALSE
pVTA	Gca	intron excision ratio	chr3_67734856_67736716	0.09	1622	0.09	5.6e-08	-5.22	1.82e-07	0.4	FALSE
pVTA	LOC108350383	intron excision ratio	chr3_68231369_68231717	0.03	1304	0.02	6.5e-03	5.55	2.92e-08	0.41	FALSE
pVTA	Grb14	mRNA stability	Grb14	0.19	2786	0.23	1.3e-18	5.38	7.44e-08	0.22	FALSE