Best TWAS P=1.87e-08 · Best GWAS P=1.14e-08 conditioned to 1.16e-01
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
BLA | Cyp7b1 | gene expression | ENSRNOG00000009730 | 0.43 | 71 | 0.29 | 5.8e-16 | 5.55 | 2.93e-08 | 0.49 | FALSE |
Brain | Cyp7b1 | gene expression | ENSRNOG00000009730 | 0.32 | 271 | 0.28 | 7.1e-26 | 5.34 | 9.31e-08 | 0.21 | FALSE |
Brain | Pde7a | gene expression | ENSRNOG00000013048 | 0.03 | 1 | 0.03 | 3.9e-04 | -5.21 | 1.85e-07 | 0.05 | FALSE |
Brain | Bhlhe22 | gene expression | ENSRNOG00000021745 | 0.07 | 1 | 0.04 | 8.5e-05 | -5.15 | 2.54e-07 | 0.05 | FALSE |
Brain | Cyp7b1 | intron excision ratio | chr2:100638373:100669465 | 0.04 | 17 | 0.04 | 2.6e-04 | 5.62 | 1.87e-08 | 0.35 | TRUE |
Brain | Cyp7b1 | intron excision ratio | chr2:100660904:100669465 | 0.04 | 17 | 0.04 | 1.1e-04 | -5.48 | 4.31e-08 | 0.35 | FALSE |
Brain | Cyp7b1 | mRNA stability | ENSRNOG00000009730 | 0.05 | 1 | 0.03 | 7.4e-04 | 5.31 | 1.09e-07 | 0.04 | FALSE |
IL | Cyp7b1 | gene expression | ENSRNOG00000009730 | 0.18 | 1 | 0.08 | 6.5e-03 | 5.3 | 1.14e-07 | 0.05 | FALSE |
LHb | Armc1 | gene expression | ENSRNOG00000013253 | 0.31 | 1 | 0.2 | 1.4e-05 | -5.43 | 5.52e-08 | 0.09 | FALSE |
Liver | ENSRNOG00000066523 | mRNA stability | ENSRNOG00000066523 | 0.48 | 2080 | 0.3 | 1.6e-33 | 5.56 | 2.69e-08 | 0.53 | FALSE |
NAcc | Mtfr1 | gene expression | ENSRNOG00000021359 | 0.06 | 1 | 0.04 | 3.3e-04 | -5.45 | 4.95e-08 | 0.08 | FALSE |
NAcc | Bhlhe22 | gene expression | ENSRNOG00000021745 | 0.11 | 1 | 0.07 | 6.0e-06 | 5.23 | 1.70e-07 | 0.09 | FALSE |
PL | Cyp7b1 | gene expression | ENSRNOG00000009730 | 0.1 | 2233 | 0.07 | 3.9e-06 | 5.5 | 3.75e-08 | 0.41 | FALSE |
PL | Armc1 | gene expression | ENSRNOG00000013253 | 0.06 | 1 | 0.04 | 5.1e-04 | -5.33 | 9.68e-08 | 0.08 | FALSE |