Hub : Traits : Extensor digitorum longus weight : ← : →

chr2:89,481,819-90,881,229

Trait: Extensor digitorum longus weight

Best TWAS P = 1.08e-10 · Best GWAS P= 2.57e-11 conditioned to 2.66e-14

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Brain	Ralyl	isoform ratio	XM_017590727.3	0.22	1	0.08	9.1e-08	5.25	1.52e-07	0.01	FALSE
Brain	Ralyl	isoform ratio	XM_039101954.2	0.36	22	0.17	6.6e-16	-5.22	1.78e-07	0.03	FALSE
Brain	Ralyl	intron excision ratio	chr2_89538934_89571226	0.05	2733	0.01	1.6e-02	-5.6	2.08e-08	0.29	FALSE
IC	Ralyl	alternative TSS	XM_039101954.2	0.57	38	0.3	2.6e-13	-5.51	3.52e-08	0.08	FALSE
IC	Ralyl	alternative TSS	NM_001393770.1	0.19	2034	0.12	1.3e-05	5.36	8.29e-08	0.22	FALSE
IC	Ralyl	alternative TSS	XM_039101954.2	0.58	32	0.33	2.7e-14	-5.74	9.63e-09	0.23	FALSE
LHb	Ralyl	alternative TSS	NM_001024978.2	0.31	1	0.03	6.3e-02	6.16	7.13e-10	0.05	FALSE
LHb	Ralyl	alternative TSS	XM_008760853.4	0.22	13	0.05	3.0e-02	5.49	3.98e-08	0.28	FALSE
LHb	Ralyl	alternative TSS	XM_039101954.2	0.25	53	0.08	6.2e-03	-5.45	5.04e-08	0.17	FALSE
LHb	Ralyl	alternative TSS	XM_063281532.1	0.31	1	0.06	1.5e-02	-6.46	1.08e-10	0.06	TRUE
LHb	Ralyl	alternative TSS	XM_008760853.4	0.22	17	0.05	2.8e-02	5.49	3.98e-08	0.28	FALSE
LHb	Ralyl	alternative TSS	XM_039101954.2	0.24	65	0.08	5.9e-03	-5.41	6.15e-08	0.17	TRUE
LHb	Ralyl	alternative TSS	XM_063281532.1	0.3	2733	0.04	4.7e-02	-5.87	4.36e-09	0.36	FALSE
LHb	Ralyl	gene expression	Ralyl	0.62	1	0.11	1.1e-03	5.48	4.28e-08	0.05	FALSE
LHb	Ralyl	isoform ratio	XM_008760853.4	0.26	2	0.1	2.2e-03	5.88	4.15e-09	0.28	TRUE
LHb	Ralyl	mRNA stability	Ralyl	0.37	4	0.13	5.0e-04	5.39	7.22e-08	0.48	FALSE
OFC	Ralyl	gene expression	Ralyl	0.44	73	0.12	8.0e-04	-5.23	1.70e-07	0.17	FALSE
OFC	Ralyl	isoform ratio	XM_039101954.2	0.42	14	0.17	6.9e-05	-5.3	1.14e-07	0.22	FALSE
OFC	Ralyl	intron excision ratio	chr2_89446704_89456870	0.35	2	0.13	6.5e-04	6.27	3.58e-10	0.23	TRUE
OFC	Ralyl	intron excision ratio	chr2_89571301_89658335	0.22	14	0.09	3.8e-03	5.37	8.09e-08	0.28	FALSE
pVTA	Ralyl	alternative TSS	XM_017590724.2	0.08	2732	0.07	2.0e-06	-6.16	7.36e-10	0.67	FALSE
pVTA	Ralyl	alternative TSS	XM_063281535.1	0.03	1	0.01	2.9e-02	-5.65	1.64e-08	0.03	FALSE
pVTA	Ralyl	alternative TSS	NM_001393770.1	0.14	2732	0.14	4.4e-11	5.73	9.88e-09	0.04	FALSE
pVTA	Ralyl	alternative TSS	XM_017590724.2	0.08	2732	0.07	3.2e-06	-6.12	9.25e-10	0.66	FALSE