Best TWAS P=7.38e-08 · Best GWAS P=1.86e-07 conditioned to 4.71e-01
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Sec31a | isoform ratio | ENSRNOT00000097169 | 0.05 | 3203 | 0.03 | 7.9e-04 | 5.33 | 1.00e-07 | 0.63 | FALSE |
Brain | Lin54 | alternative TSS | ENSRNOT00000003006 | 0.03 | 2 | 0.02 | 1.2e-02 | -5.2 | 1.94e-07 | 0.59 | FALSE |
Brain | Lin54 | alternative TSS | ENSRNOT00000003006 | 0.04 | 3225 | 0.03 | 1.5e-03 | -5.16 | 2.48e-07 | 0.67 | FALSE |
Brain | Cops4 | gene expression | ENSRNOG00000023650 | 0.15 | 17 | 0.15 | 1.9e-13 | -5.16 | 2.50e-07 | 0.73 | FALSE |
Eye | Tmem150c | gene expression | ENSRNOG00000002258 | 0.31 | 3691 | 0.15 | 2.9e-03 | 5.2 | 2.04e-07 | 0.34 | FALSE |
LHb | Coq2 | gene expression | ENSRNOG00000002194 | 0.24 | 1 | 0.08 | 6.3e-03 | -5.13 | 2.91e-07 | 0.06 | FALSE |
OFC | Hpse | gene expression | ENSRNOG00000002188 | 0.21 | 1 | 0.17 | 7.0e-05 | 5.13 | 2.92e-07 | 0.07 | FALSE |
PL | Enoph1 | gene expression | ENSRNOG00000002262 | 0.07 | 3631 | 0.07 | 8.3e-06 | 5.23 | 1.67e-07 | 0.72 | FALSE |
PL | Coq2 | mRNA stability | ENSRNOG00000002194 | 0.04 | 1 | 0.04 | 3.4e-04 | -5.14 | 2.80e-07 | 0.14 | FALSE |
PL | Lin54 | mRNA stability | ENSRNOG00000002203 | 0.03 | 3225 | 0.02 | 1.3e-02 | -5.38 | 7.38e-08 | 0.52 | TRUE |