Hub : Traits : EDL weight in grams :

chr9:44,247,541-49,751,781

Best TWAS P=6.825242e-12 · Best GWAS P=8.081233e-12 conditioned to 1

Associated models

# Tissue Gene Modality RNA phenotype h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 Adipose Fhl2 alternative polyA ENSRNOT00000023014 0.04 0.02 top1 1 0.02 8.8e-04 -5.43 -5.4 5.8e-08 -0.55 0.10 0.04 FALSE
2 Adipose Fhl2 alternative polyA ENSRNOT00000101412 0.06 0.03 lasso 7 0.03 9.5e-05 -5.43 5.3 1.0e-07 0.55 0.70 0.30 FALSE
3 Adipose Ormdl1 alternative polyA ENSRNOT00000102245 0.28 0.11 lasso 8 0.13 1.3e-14 4.11 -5.8 6.7e-09 -0.86 0.75 0.25 TRUE
4 Adipose Wdr75 alternative TSS ENSRNOT00000050275 0.03 0.01 blup 2163 0.01 6.8e-02 3.43 -5.7 1.3e-08 -0.87 0.29 0.10 TRUE
5 Adipose Wdr75 alternative TSS ENSRNOT00000083864 0.03 0.00 blup 2163 0.01 6.9e-02 3.43 5.8 5.6e-09 0.89 0.28 0.11 FALSE
6 Adipose Ercc5 alternative TSS ENSRNOT00000059349 0.08 0.02 blup 1149 0.03 6.1e-04 -5.01 -5.2 1.6e-07 -0.66 0.48 0.47 FALSE
7 Adipose Ercc5 alternative TSS ENSRNOT00000076248 0.09 0.03 blup 1149 0.03 1.1e-04 -5.01 5.2 1.8e-07 0.67 0.49 0.49 FALSE
8 Adipose Gulp1 gene expression ENSRNOG00000003242 0.08 0.05 top1 1 0.05 4.6e-06 -5.15 -5.1 2.6e-07 -0.56 0.31 0.57 FALSE
9 Adipose Col5a2 gene expression ENSRNOG00000003736 0.04 0.03 lasso 5 0.03 3.9e-04 6.66 6.6 3.5e-11 0.96 0.55 0.41 FALSE
10 Adipose Wdr75 gene expression ENSRNOG00000003825 0.20 0.12 enet 78 0.13 9.6e-14 6.64 -6.5 9.4e-11 -0.97 0.62 0.38 FALSE
11 Adipose Asnsd1 gene expression ENSRNOG00000003942 0.15 0.08 top1 1 0.08 1.7e-09 6.47 6.5 9.9e-11 0.97 0.61 0.39 FALSE
12 Adipose Ankar gene expression ENSRNOG00000003991 0.06 0.03 top1 1 0.03 7.6e-04 6.55 6.6 5.7e-11 0.98 0.08 0.04 FALSE
13 Adipose Mrps9 gene expression ENSRNOG00000016201 0.14 0.10 blup 2968 0.11 5.3e-12 -5.69 -5.2 1.7e-07 -0.48 0.68 0.32 FALSE
14 Adipose RGD1310553 gene expression ENSRNOG00000016447 0.14 0.07 enet 124 0.07 6.0e-08 5.34 5.7 1.0e-08 0.74 0.65 0.35 FALSE
15 Adipose Nck2 gene expression ENSRNOG00000017155 0.05 0.03 top1 1 0.03 3.8e-04 -5.51 -5.5 3.6e-08 -0.56 0.14 0.09 FALSE
16 Adipose Ercc5 gene expression ENSRNOG00000022812 0.19 0.10 blup 1149 0.11 7.9e-12 -5.01 -5.2 1.7e-07 -0.65 0.50 0.50 FALSE
17 Adipose Ormdl1 gene expression ENSRNOG00000064999 0.03 0.01 top1 1 0.01 4.2e-02 5.97 -6.0 2.4e-09 -0.93 0.07 0.03 FALSE
18 Adipose NA gene expression ENSRNOG00000068766 0.07 0.03 top1 1 0.03 9.9e-05 6.11 6.1 9.8e-10 0.97 0.11 0.03 FALSE
19 Adipose Tex30 isoform ratio ENSRNOT00000015600 0.06 0.03 top1 1 0.03 3.5e-04 -5.13 5.1 2.9e-07 0.59 0.08 0.07 FALSE
20 Adipose Tex30 isoform ratio ENSRNOT00000106819 0.06 0.03 top1 1 0.03 3.3e-04 -5.13 -5.1 2.9e-07 -0.59 0.08 0.07 FALSE
21 Adipose Fhl2 isoform ratio ENSRNOT00000023014 0.11 0.08 top1 1 0.08 3.5e-09 -5.51 -5.5 3.6e-08 -0.48 0.62 0.38 TRUE
22 Adipose Ercc5 isoform ratio ENSRNOT00000059349 0.17 0.07 blup 1149 0.08 6.5e-09 -5.22 -5.2 1.8e-07 -0.68 0.50 0.50 FALSE
23 Adipose Ercc5 isoform ratio ENSRNOT00000076248 0.17 0.08 blup 1149 0.08 5.1e-09 -5.22 5.2 1.7e-07 0.68 0.50 0.50 FALSE
24 Adipose Hibch isoform ratio ENSRNOT00000040650 0.02 0.00 blup 1970 0.00 9.2e-02 6.15 5.4 5.8e-08 0.83 0.32 0.18 FALSE
25 Adipose Osgepl1 intron excision ratio chr9:48221742:48223241 0.04 0.02 top1 1 0.02 2.4e-03 6.09 6.1 1.1e-09 0.97 0.07 0.03 FALSE
26 Adipose Ercc5 intron excision ratio chr9:46344066:46350281 0.08 0.05 top1 1 0.05 2.8e-06 -5.11 -5.1 3.2e-07 -0.58 0.50 0.46 FALSE
27 Adipose Bivm intron excision ratio chr9:46284450:46289214 0.10 0.07 top1 1 0.07 3.3e-08 -5.11 5.1 3.2e-07 0.60 0.54 0.46 FALSE
28 Adipose Bivm intron excision ratio chr9:46285324:46289214 0.04 0.02 top1 1 0.02 3.4e-03 -5.13 -5.1 2.9e-07 -0.60 0.05 0.04 FALSE
29 Adipose Col5a2 mRNA stability ENSRNOG00000003736 0.06 0.03 top1 1 0.03 5.1e-04 6.62 6.6 3.5e-11 0.98 0.15 0.14 FALSE
30 Adipose Wdr75 mRNA stability ENSRNOG00000003825 0.24 0.10 blup 2163 0.11 8.6e-12 6.50 6.4 1.6e-10 0.98 0.64 0.36 FALSE
31 Adipose Nemp2 mRNA stability ENSRNOG00000012924 0.04 0.01 lasso 5 0.01 2.5e-02 5.24 5.2 1.6e-07 0.52 0.37 0.16 TRUE
32 Adipose Mrps9 mRNA stability ENSRNOG00000016201 0.43 0.25 blup 2968 0.26 2.1e-28 5.48 -5.7 1.1e-08 -0.73 0.70 0.30 FALSE
33 Adipose RGD1310553 mRNA stability ENSRNOG00000016447 0.09 0.02 blup 2950 0.04 2.8e-05 -5.35 6.1 1.2e-09 0.70 0.69 0.30 FALSE
34 Adipose Ercc5 mRNA stability ENSRNOG00000022812 0.38 0.31 lasso 43 0.32 1.5e-36 -4.99 -5.1 3.1e-07 -0.59 0.50 0.50 FALSE
35 Adipose Bivm mRNA stability ENSRNOG00000022894 0.13 0.09 top1 1 0.09 1.3e-10 -5.13 5.1 2.9e-07 0.59 0.51 0.49 FALSE
36 Adipose Tgfbrap1 mRNA stability ENSRNOG00000024562 0.21 0.12 top1 1 0.12 3.9e-13 -5.19 -5.2 2.2e-07 -0.53 0.90 0.10 FALSE
37 BLA Osgepl1 alternative polyA ENSRNOT00000005408 0.05 0.03 top1 1 0.03 6.5e-03 6.04 -6.0 1.5e-09 -0.97 0.09 0.04 FALSE
38 BLA Osgepl1 alternative polyA ENSRNOT00000107507 0.05 0.03 top1 1 0.03 8.2e-03 6.04 6.0 1.5e-09 0.97 0.09 0.04 FALSE
39 BLA Fhl2 alternative polyA ENSRNOT00000023014 0.23 0.11 top1 1 0.11 2.5e-06 -5.43 -5.4 5.6e-08 -0.60 0.59 0.23 FALSE
40 BLA Fhl2 alternative polyA ENSRNOT00000101412 0.16 0.18 enet 12 0.18 7.7e-10 -5.50 5.6 2.4e-08 0.54 0.70 0.30 FALSE
41 BLA Wdr75 gene expression ENSRNOG00000003825 0.34 0.31 top1 1 0.31 7.9e-17 5.97 -6.0 2.4e-09 -0.98 0.98 0.02 FALSE
42 BLA Nab1 gene expression ENSRNOG00000012959 0.14 0.04 lasso 10 0.07 1.3e-04 6.14 5.7 1.3e-08 0.84 0.71 0.28 FALSE
43 BLA Gpr45 gene expression ENSRNOG00000016446 0.20 0.08 blup 2946 0.12 4.5e-07 -5.52 6.1 8.9e-10 0.70 0.69 0.31 FALSE
44 BLA Ercc5 gene expression ENSRNOG00000022812 0.34 0.40 lasso 35 0.41 7.7e-24 -5.00 5.2 2.3e-07 -0.61 0.52 0.48 TRUE
45 BLA Bivm gene expression ENSRNOG00000022894 0.07 0.07 top1 1 0.07 9.3e-05 -5.11 5.1 3.2e-07 0.60 0.07 0.06 FALSE
46 BLA Osgepl1 isoform ratio ENSRNOT00000005408 0.05 0.05 top1 1 0.05 1.7e-03 6.03 -6.0 1.7e-09 -0.97 0.09 0.04 FALSE
47 BLA Osgepl1 isoform ratio ENSRNOT00000107507 0.05 0.05 top1 1 0.05 1.6e-03 6.04 6.0 1.5e-09 0.97 0.09 0.04 FALSE
48 BLA Osgepl1 intron excision ratio chr9:48221742:48223241 0.15 0.14 top1 1 0.14 6.8e-08 6.47 6.5 1.0e-10 0.96 0.51 0.39 FALSE
49 BLA Osgepl1 intron excision ratio chr9:48221742:48223370 0.15 0.13 top1 1 0.13 1.5e-07 6.47 -6.5 1.0e-10 -0.96 0.49 0.38 FALSE
50 BLA Wdr75 mRNA stability ENSRNOG00000003825 0.04 0.03 blup 2164 0.03 1.2e-02 6.47 6.4 1.2e-10 0.98 0.49 0.25 FALSE
51 BLA Mrps9 mRNA stability ENSRNOG00000016201 0.33 0.19 blup 2968 0.20 6.4e-11 5.51 -5.7 1.2e-08 -0.72 0.66 0.34 TRUE
52 BLA Tgfbrap1 mRNA stability ENSRNOG00000024562 0.09 0.09 enet 8 0.11 2.1e-06 -5.37 5.2 2.5e-07 0.42 0.70 0.29 FALSE
53 BLA Hibch mRNA stability ENSRNOG00000028557 0.29 0.18 lasso 27 0.26 3.4e-14 5.63 -5.6 2.2e-08 -0.80 0.70 0.30 FALSE
54 Brain Fhl2 alternative polyA ENSRNOT00000023014 0.27 0.33 top1 1 0.33 1.3e-31 -5.54 -5.5 3.1e-08 -0.58 0.59 0.41 FALSE
55 Brain Fhl2 alternative polyA ENSRNOT00000101412 0.27 0.31 top1 1 0.31 4.8e-29 -5.54 5.5 3.1e-08 0.58 0.59 0.41 FALSE
56 Brain Fhl2 alternative polyA ENSRNOT00000114387 0.02 0.01 blup 2897 0.02 1.0e-02 -5.56 5.9 3.5e-09 0.63 0.62 0.25 FALSE
57 Brain Fhl2 alternative polyA ENSRNOT00000023014 0.05 0.04 blup 2897 0.05 2.0e-05 -5.54 -5.9 3.6e-09 -0.63 0.70 0.30 FALSE
58 Brain Fhl2 alternative polyA ENSRNOT00000114387 0.05 0.04 blup 2897 0.05 2.3e-05 -5.54 5.9 3.5e-09 0.63 0.70 0.30 FALSE
59 Brain Ormdl1 alternative polyA ENSRNOT00000102245 0.07 0.05 enet 8 0.06 1.8e-06 6.04 6.0 2.2e-09 0.92 0.70 0.30 FALSE
60 Brain Wdr75 gene expression ENSRNOG00000003825 0.22 0.26 enet 63 0.28 3.7e-26 6.46 -6.6 4.6e-11 -0.99 0.63 0.37 FALSE
61 Brain NEWGENE_620180 gene expression ENSRNOG00000003872 0.03 0.02 blup 2535 0.02 5.6e-03 6.48 6.4 2.1e-10 0.96 0.53 0.34 FALSE
62 Brain Asnsd1 gene expression ENSRNOG00000003942 0.05 0.02 blup 2359 0.04 2.1e-04 4.22 5.7 9.3e-09 0.87 0.70 0.27 FALSE
63 Brain Inpp1 gene expression ENSRNOG00000012375 0.09 0.03 blup 1968 0.05 1.8e-05 4.09 5.5 3.5e-08 0.86 0.54 0.46 FALSE
64 Brain Mfsd6 gene expression ENSRNOG00000012663 0.46 0.25 enet 175 0.26 4.7e-24 5.24 5.6 1.7e-08 0.83 0.96 0.04 FALSE
65 Brain Gpr45 gene expression ENSRNOG00000016446 0.05 0.04 top1 1 0.04 6.7e-05 -5.50 -5.5 3.8e-08 -0.48 0.15 0.07 FALSE
66 Brain Nck2 gene expression ENSRNOG00000017155 0.20 0.05 top1 1 0.05 2.6e-05 -5.15 -5.1 2.6e-07 -0.64 0.33 0.05 FALSE
67 Brain Tpp2 isoform ratio ENSRNOT00000015393 0.02 0.03 top1 1 0.03 1.1e-03 -5.11 -5.1 3.2e-07 -0.64 0.05 0.03 FALSE
68 Brain Osgepl1 intron excision ratio chr9:48221742:48223241 0.12 0.11 lasso 16 0.12 5.9e-11 6.46 6.0 1.5e-09 0.92 0.51 0.49 FALSE
69 Brain RGD1310553 intron excision ratio chr9:45373526:45377235 0.03 0.02 blup 2951 0.03 2.0e-03 -5.19 5.8 7.5e-09 0.61 0.70 0.22 FALSE
70 Brain Ercc5 intron excision ratio chr9:46314078:46315074 0.02 0.02 top1 1 0.02 6.5e-03 -5.10 5.1 3.3e-07 0.60 0.04 0.04 FALSE
71 Brain Ercc5 intron excision ratio chr9:46344066:46350281 0.05 0.04 blup 1151 0.04 7.4e-05 -5.22 -5.2 1.6e-07 -0.65 0.50 0.49 FALSE
72 Brain NA intron excision ratio chr9:48559735:48584017 0.18 0.14 top1 1 0.14 3.8e-13 5.99 -6.0 2.1e-09 -0.94 0.38 0.62 FALSE
73 Brain Wdr75 mRNA stability ENSRNOG00000003825 0.18 0.19 blup 2164 0.20 2.0e-18 6.48 6.4 1.1e-10 0.97 0.60 0.40 FALSE
74 Brain Mrps9 mRNA stability ENSRNOG00000016201 0.29 0.25 blup 2968 0.26 1.1e-23 5.30 -5.7 1.4e-08 -0.73 0.68 0.32 FALSE
75 Brain RGD1310553 mRNA stability ENSRNOG00000016447 0.09 0.10 top1 1 0.10 3.0e-09 -5.69 5.7 1.3e-08 0.58 0.38 0.62 FALSE
76 Brain Nck2 mRNA stability ENSRNOG00000017155 0.08 0.08 top1 1 0.08 5.0e-08 -5.56 5.6 2.8e-08 0.62 0.50 0.48 FALSE
77 Brain Ercc5 mRNA stability ENSRNOG00000022812 0.12 0.13 blup 1151 0.14 7.8e-13 -5.20 -5.2 2.1e-07 -0.63 0.50 0.50 FALSE
78 Brain Bivm mRNA stability ENSRNOG00000022894 0.05 0.03 top1 1 0.03 4.8e-04 -5.23 5.2 1.7e-07 0.59 0.06 0.06 FALSE
79 Brain Tgfbrap1 mRNA stability ENSRNOG00000024562 0.05 0.04 top1 1 0.04 1.1e-04 -5.34 5.3 9.1e-08 0.57 0.23 0.06 FALSE
80 Brain NA mRNA stability ENSRNOG00000038738 0.28 0.24 top1 1 0.24 2.6e-22 5.96 6.0 2.5e-09 0.91 0.42 0.58 FALSE
81 Brain Pou3f3 mRNA stability ENSRNOG00000038909 0.03 0.01 blup 2891 0.01 2.0e-02 -5.43 5.7 1.4e-08 0.59 0.60 0.28 FALSE
82 Eye Tgfbrap1 gene expression ENSRNOG00000024562 0.43 0.16 top1 1 0.16 2.0e-03 -5.37 5.4 8.0e-08 0.57 0.16 0.05 FALSE
83 Eye Tpp2 intron excision ratio chr9:46107749:46109521 0.68 -0.01 top1 1 -0.01 4.0e-01 5.50 -5.5 3.7e-08 -0.68 0.08 0.06 FALSE
84 Eye Tpp2 intron excision ratio chr9:46107749:46114443 0.46 -0.02 enet 68 0.00 3.3e-01 5.50 5.9 2.9e-09 0.80 0.20 0.16 TRUE
85 Eye Ercc5 intron excision ratio chr9:46339662:46343922 0.32 0.08 top1 1 0.08 2.4e-02 -5.11 5.1 3.3e-07 0.61 0.06 0.06 FALSE
86 IL Wdr75 gene expression ENSRNOG00000003825 0.46 0.21 top1 1 0.21 8.5e-06 6.64 -6.6 3.2e-11 -0.98 0.16 0.12 FALSE
87 IL Ercc5 gene expression ENSRNOG00000022812 0.16 0.02 blup 1151 0.12 7.6e-04 -5.16 5.1 2.8e-07 0.61 0.29 0.28 FALSE
88 IL Fhl2 isoform ratio ENSRNOT00000101412 0.35 0.18 top1 1 0.18 4.0e-05 -5.45 5.4 5.2e-08 0.60 0.18 0.07 FALSE
89 IL Nck2 intron excision ratio chr9:45803030:45824030 0.21 0.04 top1 1 0.04 3.2e-02 -5.50 -5.5 3.7e-08 -0.58 0.12 0.05 FALSE
90 IL Mrps9 mRNA stability ENSRNOG00000016201 0.40 0.14 top1 1 0.14 2.8e-04 5.40 -5.4 6.7e-08 -0.70 0.14 0.05 FALSE
91 IL Nck2 mRNA stability ENSRNOG00000017155 0.19 0.10 top1 1 0.10 1.8e-03 -5.15 5.1 2.6e-07 0.56 0.12 0.05 FALSE
92 IL Hibch mRNA stability ENSRNOG00000028557 0.38 0.20 top1 1 0.20 1.8e-05 6.00 -6.0 2.0e-09 -0.82 0.14 0.18 FALSE
93 IL NA mRNA stability ENSRNOG00000038738 0.21 0.09 top1 1 0.09 4.4e-03 6.05 6.0 1.5e-09 0.96 0.11 0.06 FALSE
94 LHb Mstn gene expression ENSRNOG00000021294 0.23 0.07 top1 1 0.06 1.2e-02 5.24 5.2 1.6e-07 0.92 0.11 0.05 FALSE
95 LHb Hibch gene expression ENSRNOG00000028557 0.48 0.08 enet 11 0.20 1.5e-05 6.00 5.8 6.2e-09 0.92 0.60 0.34 FALSE
96 LHb Ormdl1 gene expression ENSRNOG00000064999 0.18 0.00 blup 2282 0.03 8.0e-02 3.50 5.4 5.7e-08 0.86 0.37 0.15 FALSE
97 LHb NA gene expression ENSRNOG00000068766 0.16 0.07 top1 1 0.07 1.1e-02 5.96 6.0 2.6e-09 0.97 0.12 0.05 FALSE
98 LHb Hibch isoform ratio ENSRNOT00000116077 0.27 0.10 top1 1 0.10 2.1e-03 6.06 -6.1 1.4e-09 -0.93 0.10 0.06 FALSE
99 LHb Mrps9 mRNA stability ENSRNOG00000016201 0.28 0.09 top1 1 0.09 4.0e-03 5.35 -5.3 9.0e-08 -0.70 0.14 0.05 FALSE
100 LHb NA mRNA stability ENSRNOG00000038738 0.27 0.07 top1 1 0.07 1.2e-02 6.03 6.0 1.6e-09 0.89 0.11 0.06 FALSE
101 Liver Ormdl1 alternative polyA ENSRNOT00000065581 0.05 0.01 blup 2293 0.01 9.3e-03 4.39 5.3 1.5e-07 0.80 0.60 0.17 FALSE
102 Liver Wdr75 gene expression ENSRNOG00000003825 0.06 0.01 blup 2163 0.03 7.3e-04 6.00 -6.2 5.2e-10 -0.95 0.61 0.35 FALSE
103 Liver NEWGENE_620180 gene expression ENSRNOG00000003872 0.17 0.09 top1 1 0.09 1.4e-10 6.44 6.4 1.2e-10 0.98 0.73 0.27 FALSE
104 Liver Osgepl1 gene expression ENSRNOG00000004001 0.03 0.01 top1 1 0.01 5.5e-02 6.42 -6.4 1.4e-10 -0.97 0.07 0.03 FALSE
105 Liver Poglut2 gene expression ENSRNOG00000011740 0.03 0.01 top1 1 0.01 8.3e-03 -5.11 5.1 3.2e-07 0.60 0.04 0.03 FALSE
106 Liver Inpp1 gene expression ENSRNOG00000012375 0.14 0.04 blup 1968 0.04 9.0e-06 5.24 -6.0 2.6e-09 -0.94 0.33 0.67 TRUE
107 Liver Mrps9 gene expression ENSRNOG00000016201 0.19 0.14 top1 1 0.14 7.2e-15 -5.54 -5.5 3.0e-08 -0.52 0.54 0.46 FALSE
108 Liver RGD1310553 gene expression ENSRNOG00000016447 0.37 0.18 blup 2950 0.20 2.7e-21 -5.54 6.0 1.6e-09 0.64 0.70 0.30 TRUE
109 Liver Nck2 gene expression ENSRNOG00000017155 0.86 0.36 blup 2416 0.38 5.8e-45 5.59 5.7 1.1e-08 0.79 0.42 0.58 TRUE
110 Liver Ecrg4 gene expression ENSRNOG00000023576 0.10 0.07 top1 1 0.07 3.4e-08 -5.22 5.2 1.8e-07 0.60 0.72 0.28 FALSE
111 Liver Tgfbrap1 gene expression ENSRNOG00000024562 0.09 0.07 top1 1 0.07 1.8e-08 -5.57 5.6 2.6e-08 0.52 0.55 0.44 FALSE
112 Liver Ccdc168 gene expression ENSRNOG00000063478 0.12 0.05 top1 1 0.05 2.1e-06 -5.11 5.1 3.2e-07 0.60 0.42 0.35 FALSE
113 Liver Ormdl1 gene expression ENSRNOG00000064999 0.06 0.03 blup 2293 0.03 5.9e-04 6.01 -6.2 6.6e-10 -0.96 0.52 0.44 FALSE
114 Liver Ormdl1 isoform ratio ENSRNOT00000065581 0.03 0.00 blup 2293 0.00 2.4e-01 6.36 5.9 3.1e-09 0.93 0.30 0.19 FALSE
115 Liver Ormdl1 isoform ratio ENSRNOT00000102245 0.11 0.02 blup 2293 0.04 2.3e-05 6.36 -5.6 2.2e-08 -0.88 0.57 0.43 FALSE
116 Liver Asnsd1 intron excision ratio chr9:48126949:48128543 0.03 0.00 enet 24 0.01 6.7e-02 6.46 6.0 1.5e-09 0.94 0.41 0.24 FALSE
117 Liver Asnsd1 intron excision ratio chr9:48126954:48128543 0.04 0.00 enet 24 0.01 5.4e-02 6.46 -6.1 1.3e-09 -0.94 0.43 0.25 FALSE
118 Liver Mrps9 intron excision ratio chr9:45166282:45170292 0.11 0.04 top1 1 0.04 1.1e-05 5.46 -5.5 4.7e-08 -0.73 0.30 0.15 FALSE
119 Liver Ercc5 intron excision ratio chr9:46344066:46350281 0.09 0.05 top1 1 0.05 1.4e-06 -5.15 -5.1 2.6e-07 -0.60 0.43 0.47 FALSE
120 Liver Bivm intron excision ratio chr9:46284450:46289214 0.05 0.03 top1 1 0.03 3.2e-04 -5.15 5.2 2.6e-07 0.60 0.09 0.09 FALSE
121 Liver Bivm intron excision ratio chr9:46285324:46289214 0.02 0.01 top1 1 0.01 2.4e-02 -5.22 -5.2 1.8e-07 -0.59 0.04 0.03 FALSE
122 Liver Tgfbrap1 intron excision ratio chr9:45348544:45353406 0.17 0.12 top1 1 0.12 3.5e-13 -5.52 5.5 3.3e-08 0.51 0.61 0.39 FALSE
123 Liver Wdr75 mRNA stability ENSRNOG00000003825 0.04 0.02 blup 2163 0.02 3.3e-03 6.49 6.3 2.2e-10 0.97 0.56 0.33 FALSE
124 Liver Mrps9 mRNA stability ENSRNOG00000016201 0.13 0.03 blup 2968 0.06 4.4e-07 -5.54 -6.0 1.8e-09 -0.70 0.68 0.32 FALSE
125 Liver RGD1310553 mRNA stability ENSRNOG00000016447 0.10 0.06 top1 1 0.06 6.6e-07 -5.43 5.4 5.6e-08 0.52 0.68 0.27 FALSE
126 Liver Nck2 mRNA stability ENSRNOG00000017155 0.29 0.07 top1 1 0.07 5.0e-08 5.59 5.6 2.3e-08 0.69 0.46 0.53 FALSE
127 Liver Ercc5 mRNA stability ENSRNOG00000022812 0.11 0.08 lasso 27 0.09 1.1e-09 -5.18 -5.1 2.8e-07 -0.59 0.49 0.51 FALSE
128 Liver Bivm mRNA stability ENSRNOG00000022894 0.06 0.04 top1 1 0.04 1.8e-05 -5.11 5.1 3.2e-07 0.60 0.29 0.26 FALSE
129 NAcc Ormdl1 alternative polyA ENSRNOT00000102245 0.42 -0.01 blup 2282 0.00 2.9e-01 6.00 5.5 3.3e-08 0.89 0.32 0.09 FALSE
130 NAcc Wdr75 gene expression ENSRNOG00000003825 0.54 0.16 top1 1 0.16 1.9e-04 6.55 -6.6 5.7e-11 -0.98 0.12 0.06 FALSE
131 NAcc Ercc5 gene expression ENSRNOG00000022812 0.30 0.18 top1 1 0.18 8.0e-05 -5.10 5.1 3.3e-07 0.59 0.09 0.08 FALSE
132 NAcc Hibch gene expression ENSRNOG00000028557 0.33 0.09 blup 1964 0.10 3.5e-03 6.00 5.9 4.4e-09 0.90 0.32 0.40 FALSE
133 NAcc Mrps9 mRNA stability ENSRNOG00000016201 0.48 0.17 lasso 3 0.18 9.9e-05 5.35 -5.3 8.9e-08 -0.72 0.61 0.24 FALSE
134 NAcc2 Fhl2 alternative polyA ENSRNOT00000023014 0.12 0.13 top1 1 0.13 1.2e-07 -5.43 -5.4 5.6e-08 -0.51 0.68 0.27 FALSE
135 NAcc2 Fhl2 alternative polyA ENSRNOT00000101412 0.15 0.18 top1 1 0.18 9.4e-10 -5.50 5.5 3.7e-08 0.54 0.62 0.36 FALSE
136 NAcc2 Col3a1 gene expression ENSRNOG00000003357 0.12 0.02 enet 7 0.08 6.3e-05 0.85 6.0 2.3e-09 0.90 0.22 0.22 TRUE
137 NAcc2 Wdr75 gene expression ENSRNOG00000003825 0.16 0.09 top1 1 0.09 8.6e-06 6.04 -6.0 1.5e-09 -0.98 0.43 0.03 FALSE
138 NAcc2 Pms1 gene expression ENSRNOG00000004076 0.18 0.10 enet 35 0.10 3.2e-06 3.40 5.1 3.0e-07 0.82 0.87 0.12 FALSE
139 NAcc2 Mfsd6 gene expression ENSRNOG00000012663 0.13 0.06 top1 1 0.06 5.9e-04 5.24 5.2 1.6e-07 0.94 0.08 0.04 FALSE
140 NAcc2 Mrps9 gene expression ENSRNOG00000016201 0.08 0.08 top1 1 0.08 4.5e-05 -5.41 -5.4 6.2e-08 -0.49 0.35 0.14 FALSE
141 NAcc2 Ercc5 gene expression ENSRNOG00000022812 0.13 0.16 top1 1 0.16 7.8e-09 -5.11 5.1 3.2e-07 0.60 0.52 0.47 FALSE
142 NAcc2 Tgfbrap1 gene expression ENSRNOG00000024562 0.07 0.02 blup 2951 0.03 6.4e-03 -5.54 -5.5 3.2e-08 -0.55 0.70 0.28 FALSE
143 NAcc2 Hibch gene expression ENSRNOG00000028557 0.13 0.04 blup 1970 0.08 4.5e-05 6.09 5.6 1.8e-08 0.86 0.52 0.47 FALSE
144 NAcc2 NA gene expression ENSRNOG00000068766 0.05 0.02 top1 1 0.02 2.0e-02 5.99 6.0 2.1e-09 0.97 0.09 0.04 FALSE
145 NAcc2 Tex30 isoform ratio ENSRNOT00000015600 0.10 0.00 blup 1188 0.01 1.3e-01 -5.18 5.2 1.9e-07 0.68 0.41 0.38 FALSE
146 NAcc2 Tex30 isoform ratio ENSRNOT00000106819 0.10 0.02 top1 1 0.02 3.6e-02 -5.18 -5.2 2.2e-07 -0.62 0.05 0.04 FALSE
147 NAcc2 Osgepl1 intron excision ratio chr9:48221742:48223241 0.13 0.10 top1 1 0.10 6.3e-06 5.96 6.0 2.6e-09 0.97 0.23 0.04 FALSE
148 NAcc2 Osgepl1 intron excision ratio chr9:48221742:48223370 0.14 0.08 enet 53 0.10 4.3e-06 5.96 -6.3 2.2e-10 -0.93 0.60 0.39 FALSE
149 NAcc2 Mfsd6 intron excision ratio chr9:48773600:48793273 0.07 0.01 blup 1908 0.03 1.7e-02 6.15 -5.5 4.8e-08 -0.83 0.50 0.34 FALSE
150 NAcc2 Mfsd6 intron excision ratio chr9:48773902:48793273 0.07 0.01 blup 1908 0.02 1.7e-02 6.15 5.5 4.5e-08 0.83 0.49 0.34 FALSE
151 NAcc2 Ercc5 intron excision ratio chr9:46339662:46343922 0.13 0.16 top1 1 0.16 3.7e-09 -5.11 5.1 3.2e-07 0.60 0.52 0.47 FALSE
152 NAcc2 Ercc5 intron excision ratio chr9:46344066:46350281 0.05 0.01 top1 1 0.01 6.1e-02 -5.20 -5.2 2.0e-07 -0.58 0.05 0.04 FALSE
153 NAcc2 Mrps9 mRNA stability ENSRNOG00000016201 0.36 0.28 top1 1 0.28 1.1e-15 5.38 -5.4 7.3e-08 -0.69 0.74 0.26 FALSE
154 NAcc2 RGD1310553 mRNA stability ENSRNOG00000016447 0.06 0.06 top1 1 0.06 2.8e-04 -5.41 5.4 6.2e-08 0.61 0.13 0.04 FALSE
155 NAcc2 NA mRNA stability ENSRNOG00000038738 0.07 0.05 top1 1 0.05 1.5e-03 6.04 6.0 1.5e-09 0.92 0.09 0.06 FALSE
156 NAcc2 Pou3f3 mRNA stability ENSRNOG00000038909 0.05 0.08 top1 1 0.08 5.2e-05 -5.37 5.4 8.0e-08 0.49 0.14 0.05 FALSE
157 OFC Ormdl1 alternative polyA ENSRNOT00000102001 0.20 0.05 enet 3 0.07 8.1e-03 3.60 -5.4 6.2e-08 -0.84 0.38 0.27 FALSE
158 OFC Wdr75 gene expression ENSRNOG00000003825 0.52 0.36 top1 1 0.36 1.9e-09 6.58 -6.6 4.8e-11 -0.98 0.46 0.35 FALSE
159 OFC Tex30 gene expression ENSRNOG00000011658 0.16 0.10 top1 1 0.10 2.8e-03 -5.12 5.1 3.1e-07 0.60 0.07 0.06 FALSE
160 OFC Mstn gene expression ENSRNOG00000021294 0.45 0.21 top1 1 0.21 1.2e-05 6.05 -6.0 1.5e-09 -0.96 0.14 0.09 FALSE
161 OFC Fhl2 isoform ratio ENSRNOT00000101412 0.44 0.19 lasso 3 0.20 1.6e-05 -5.50 5.5 4.1e-08 0.39 0.69 0.30 TRUE
162 OFC Mrps9 mRNA stability ENSRNOG00000016201 0.29 0.10 top1 1 0.10 2.3e-03 5.46 -5.5 4.7e-08 -0.71 0.14 0.05 FALSE
163 OFC Tgfbrap1 mRNA stability ENSRNOG00000024562 0.17 0.08 blup 2948 0.09 4.2e-03 -5.54 5.5 2.9e-08 0.54 0.56 0.23 FALSE
164 OFC Hibch mRNA stability ENSRNOG00000028557 0.35 0.15 lasso 6 0.21 1.2e-05 6.02 -5.8 5.5e-09 -0.94 0.56 0.42 FALSE
165 PL Col5a2 gene expression ENSRNOG00000003736 0.29 0.16 top1 1 0.16 1.4e-04 6.47 6.5 9.9e-11 0.98 0.10 0.06 FALSE
166 PL Wdr75 gene expression ENSRNOG00000003825 0.94 0.19 blup 2154 0.19 3.3e-05 6.55 -6.9 6.8e-12 -0.97 0.56 0.44 TRUE
167 PL Ercc5 gene expression ENSRNOG00000022812 0.36 0.19 enet 7 0.19 2.5e-05 -5.13 5.1 3.1e-07 0.62 0.49 0.48 FALSE
168 PL NA gene expression ENSRNOG00000038738 0.35 0.11 top1 1 0.11 1.2e-03 6.10 6.1 1.0e-09 0.96 0.12 0.08 FALSE
169 PL Mrps9 intron excision ratio chr9:45170461:45172088 0.25 0.01 blup 2964 0.09 4.8e-03 5.56 -5.6 2.1e-08 -0.73 0.51 0.20 FALSE
170 PL Nck2 intron excision ratio chr9:45803030:45824030 0.19 0.16 enet 20 0.19 3.2e-05 -5.16 5.4 6.6e-08 0.59 0.49 0.18 TRUE
171 PL Wdr75 mRNA stability ENSRNOG00000003825 0.24 0.06 lasso 4 0.07 8.5e-03 6.03 6.3 3.8e-10 0.97 0.49 0.20 FALSE
172 PL Fhl2 mRNA stability ENSRNOG00000016866 0.45 0.16 lasso 3 0.19 2.7e-05 5.47 5.5 3.7e-08 0.67 0.66 0.28 TRUE
173 PL NA mRNA stability ENSRNOG00000038738 0.20 0.08 blup 2184 0.09 4.8e-03 5.96 6.1 9.9e-10 0.96 0.31 0.46 FALSE
174 PL2 Fhl2 alternative polyA ENSRNOT00000023014 0.14 0.12 blup 2897 0.14 4.2e-08 -5.59 -5.6 2.2e-08 -0.56 0.70 0.30 FALSE
175 PL2 Fhl2 alternative polyA ENSRNOT00000101412 0.14 0.13 lasso 19 0.14 3.1e-08 -5.41 5.5 4.5e-08 0.54 0.69 0.31 FALSE
176 PL2 Ercc5 alternative TSS ENSRNOT00000059349 0.12 0.14 top1 1 0.14 6.4e-08 -5.11 5.1 3.1e-07 0.59 0.50 0.46 FALSE
177 PL2 Ercc5 alternative TSS ENSRNOT00000076248 0.12 0.14 top1 1 0.14 5.8e-08 -5.11 -5.1 3.1e-07 -0.59 0.50 0.46 FALSE
178 PL2 Col5a2 gene expression ENSRNOG00000003736 0.09 0.04 blup 1631 0.06 2.5e-04 6.64 6.7 2.1e-11 0.97 0.57 0.42 FALSE
179 PL2 Wdr75 gene expression ENSRNOG00000003825 0.34 0.19 lasso 13 0.23 1.7e-12 6.48 -6.5 6.9e-11 -0.99 0.60 0.40 FALSE
180 PL2 Mfsd6 gene expression ENSRNOG00000012663 0.09 0.03 blup 1908 0.05 9.5e-04 6.15 5.6 2.1e-08 0.85 0.51 0.42 FALSE
181 PL2 Tgfbrap1 gene expression ENSRNOG00000024562 0.07 0.06 enet 50 0.06 2.1e-04 -5.51 5.3 1.3e-07 0.54 0.68 0.30 TRUE
182 PL2 NA gene expression ENSRNOG00000038738 0.29 0.10 enet 51 0.16 4.7e-09 3.40 5.3 9.2e-08 0.85 0.51 0.49 FALSE
183 PL2 Ormdl1 gene expression ENSRNOG00000064999 0.14 0.05 lasso 41 0.05 6.9e-04 6.03 6.7 1.9e-11 0.93 0.62 0.35 FALSE
184 PL2 Fhl2 isoform ratio ENSRNOT00000023014 0.10 0.05 top1 1 0.05 1.3e-03 -5.22 -5.2 1.8e-07 -0.61 0.15 0.04 FALSE
185 PL2 Fhl2 isoform ratio ENSRNOT00000101412 0.10 0.05 blup 2897 0.07 1.4e-04 -5.50 6.0 2.2e-09 0.66 0.72 0.28 FALSE
186 PL2 Gulp1 intron excision ratio chr9:46870226:46870478 0.04 0.03 top1 1 0.03 6.6e-03 -5.11 -5.1 3.1e-07 -0.58 0.04 0.04 FALSE
187 PL2 Osgepl1 intron excision ratio chr9:48221742:48223241 0.20 0.07 enet 75 0.11 2.1e-06 6.05 5.9 3.6e-09 0.94 0.75 0.25 FALSE
188 PL2 Osgepl1 intron excision ratio chr9:48221742:48223370 0.22 0.08 lasso 18 0.11 1.1e-06 6.03 -5.9 4.5e-09 -0.95 0.76 0.24 FALSE
189 PL2 Mrps9 intron excision ratio chr9:45166282:45170292 0.09 0.05 top1 1 0.05 9.0e-04 5.38 5.4 7.3e-08 0.71 0.12 0.04 FALSE
190 PL2 Mrps9 intron excision ratio chr9:45170461:45172088 0.17 0.11 top1 1 0.11 1.9e-06 5.38 -5.4 7.3e-08 -0.71 0.62 0.22 FALSE
191 PL2 Wdr75 mRNA stability ENSRNOG00000003825 0.18 0.11 blup 2164 0.12 3.6e-07 6.59 6.5 8.6e-11 0.98 0.58 0.42 FALSE
192 PL2 Mrps9 mRNA stability ENSRNOG00000016201 0.70 0.29 lasso 13 0.34 4.6e-19 5.38 -5.4 5.9e-08 -0.60 0.66 0.34 FALSE
193 PL2 Nck2 mRNA stability ENSRNOG00000017155 0.12 0.08 blup 2417 0.09 1.0e-05 -5.07 5.6 2.0e-08 0.63 0.84 0.16 FALSE
194 PL2 Hibch mRNA stability ENSRNOG00000028557 0.48 0.33 lasso 18 0.36 1.0e-20 5.63 -5.7 9.7e-09 -0.89 0.30 0.70 FALSE
195 PL2 NA mRNA stability ENSRNOG00000038738 0.15 0.08 blup 2191 0.09 2.0e-05 5.94 6.0 2.1e-09 0.95 0.35 0.65 FALSE

h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.