Hub : Traits : Extensor digitorum longus weight : ← : →

chr7:128,140,829-129,787,062

Trait: Extensor digitorum longus weight

Best TWAS P=1.06e-07 · Best GWAS P=1.12e-07 conditioned to 1.00e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	LOC102548155	gene expression	LOC102548155	0.33	1	0.04	7.0e-05	-5.2	1.96e-07	0.14	FALSE
Adipose	Tmem106c	intron excision ratio	chr7_129091964_129092370	0.08	1	0.09	3.0e-10	-5.18	2.20e-07	0.48	FALSE
BLA	Rpap3	gene expression	Rpap3	0.53	1	0.43	6.2e-25	5.2	1.95e-07	0.44	FALSE
BLA	Slc48a1	isoform ratio	NM_001127456.1	0.2	1	0.13	2.4e-07	-5.18	2.20e-07	0.34	FALSE
BLA	Tmem106c	isoform ratio	NM_001008358.1	0.8	1	0.2	1.1e-10	-5.18	2.20e-07	0.48	FALSE
BLA	Tmem106c	intron excision ratio	chr7_129089299_129091145	0.08	1	0.06	4.8e-04	5.18	2.21e-07	0.05	FALSE
Brain	Slc48a1	alternative polyA	NM_001127456.1	0.2	2383	0.15	4.2e-14	5.24	1.57e-07	0.38	FALSE
Brain	Slc48a1	alternative polyA	XM_039078912.1	0.19	2383	0.16	2.1e-14	-5.24	1.65e-07	0.38	FALSE
Brain	Slc48a1	alternative polyA	NM_001127456.1	0.22	2383	0.15	5.8e-14	5.27	1.35e-07	0.39	FALSE
Brain	Slc48a1	alternative polyA	XM_039078913.1	0.21	2383	0.15	3.4e-14	-5.28	1.29e-07	0.39	FALSE
Brain	LOC102548155	gene expression	LOC102548155	0.34	1	0.51	5.5e-54	-5.18	2.26e-07	0.4	FALSE
Brain	Rpap3	gene expression	Rpap3	0.19	2221	0.23	5.3e-21	-5.18	2.22e-07	0.38	FALSE
Brain	Slc48a1	isoform ratio	NM_001127456.1	0.16	2383	0.15	1.9e-13	5.19	2.06e-07	0.39	FALSE
Brain	Tmem106c	intron excision ratio	chr7_129091535_129091915	0.02	1	0.03	1.2e-03	-5.18	2.20e-07	0.04	FALSE
Brain	Rpap3	mRNA stability	Rpap3	0.1	25	0.12	2.6e-11	5.32	1.06e-07	0.36	TRUE
NAcc	Slc48a1	alternative polyA	NM_001127456.1	0.19	1	0.11	2.9e-12	-5.22	1.78e-07	0.46	FALSE
NAcc	Slc48a1	alternative polyA	XM_039078912.1	0.17	2	0.14	1.6e-15	-5.22	1.78e-07	0.38	FALSE
NAcc	Slc48a1	alternative polyA	NM_001127456.1	0.14	1	0.11	1.5e-12	-5.22	1.78e-07	0.46	FALSE
NAcc	Slc48a1	alternative polyA	XM_039078913.1	0.14	2	0.13	3.4e-15	-5.22	1.78e-07	0.37	FALSE
NAcc	Tmem106c	gene expression	Tmem106c	0.22	1	0.19	1.8e-21	-5.18	2.21e-07	0.48	FALSE
NAcc	Slc48a1	isoform ratio	NM_001127456.1	0.38	1	0.12	6.9e-14	-5.22	1.78e-07	0.46	FALSE
NAcc	Slc48a1	isoform ratio	XM_039078913.1	0.11	1	0.05	6.8e-07	5.22	1.78e-07	0.41	FALSE
NAcc	Tmem106c	isoform ratio	NM_001008358.1	0.11	1	0.1	2.2e-11	-5.18	2.21e-07	0.48	FALSE
NAcc	Tmem106c	intron excision ratio	chr7_129088770_129089109	0.02	1	0.01	1.8e-02	5.24	1.65e-07	0.03	FALSE
OFC	Tmem106c	isoform ratio	XR_005486650.1	0.17	16	0.15	2.4e-04	-5.18	2.20e-07	0.37	FALSE
PL	Rpap3	alternative TSS	XM_017594782.2	0.08	1	0.04	1.2e-05	5.22	1.78e-07	0.27	FALSE
PL	Rpap3	alternative TSS	XM_017594782.2	0.09	2221	0.04	1.1e-05	-5.18	2.27e-07	0.37	FALSE
PL	LOC102548155	isoform ratio	XR_001839033.2	0.03	1	0.01	8.8e-03	-5.18	2.21e-07	0.03	FALSE
RMTg	Slc48a1	gene expression	Slc48a1	0.12	1	0.06	1.0e-02	-5.22	1.78e-07	0.05	FALSE