Best TWAS P = 3.75e-08 · Best GWAS P= 1.35e-07 conditioned to 1.34e-97
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Iqck | gene expression | Iqck | 0.38 | 11 | 0.27 | 9.2e-30 | -5.47 | 4.59e-08 | 0.55 | FALSE |
| BLA | LOC120099916 | gene expression | LOC120099916 | 0.17 | 51 | 0.18 | 1.0e-09 | 5.29 | 1.23e-07 | 0.51 | FALSE |
| BLA | Syt17 | isoform ratio | XM_006230104.2 | 0.05 | 2706 | 0.02 | 3.2e-02 | -5.43 | 5.76e-08 | 0.3 | FALSE |
| BLA | Rps15a | intron excision ratio | chr1_181860280_181861108 | 0.17 | 2737 | 0.15 | 3.3e-08 | 5.37 | 7.93e-08 | 0.19 | FALSE |
| BLA | Rps15a | intron excision ratio | chr1_181860280_181861215 | 0.11 | 2737 | 0.09 | 3.1e-05 | -5.34 | 9.40e-08 | 0.29 | FALSE |
| IC | Eri2 | intron excision ratio | chr1_183578681_183579544 | 0.38 | 29 | 0.16 | 4.4e-07 | 5.25 | 1.49e-07 | 0.52 | FALSE |
| IC | Eri2 | intron excision ratio | chr1_183579177_183579544 | 0.38 | 30 | 0.16 | 4.1e-07 | -5.27 | 1.35e-07 | 0.52 | FALSE |
| IC | Rps15a | intron excision ratio | chr1_181860280_181861108 | 0.09 | 2348 | 0.02 | 4.7e-02 | 5.45 | 5.14e-08 | 0.21 | FALSE |
| Liver | Gde1 | gene expression | Gde1 | 0.39 | 18 | 0.19 | 6.8e-21 | -5.43 | 5.70e-08 | 0.53 | FALSE |
| Liver | RGD1559600 | intron excision ratio | chr1_183405725_183418750 | 0.33 | 41 | 0.01 | 4.9e-02 | -5.31 | 1.09e-07 | 0.4 | FALSE |
| NAcc | Lyrm1 | isoform ratio | NM_001276487.1 | 0.03 | 22 | 0.02 | 1.6e-04 | 5.22 | 1.80e-07 | 0.01 | FALSE |
| PL | Rps15a | intron excision ratio | chr1_181860280_181861108 | 0.04 | 2737 | 0.04 | 1.4e-05 | 5.31 | 1.11e-07 | 0.52 | FALSE |
| PL | Rps15a | intron excision ratio | chr1_181860280_181861215 | 0.02 | 2737 | 0.02 | 3.0e-03 | -5.38 | 7.33e-08 | 0.48 | FALSE |
| PL | Syt17 | intron excision ratio | chr1_182191400_182191628 | 0.03 | 2706 | 0.02 | 1.8e-03 | -5.24 | 1.57e-07 | 0.52 | FALSE |
| pVTA | Gde1 | gene expression | Gde1 | 0.06 | 13 | 0.05 | 3.8e-05 | 5.5 | 3.75e-08 | 0.52 | TRUE |