Best TWAS P = 2.47e-08 · Best GWAS P= 3.59e-08 conditioned to 3.26e-01
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Brain | Zkscan2 | gene expression | Zkscan2 | 0.1 | 1 | 0.09 | 2.0e-08 | 5.38 | 7.41e-08 | 0.9 | FALSE |
| NAcc | Lcmt1 | gene expression | Lcmt1 | 0.11 | 1 | 0.12 | 1.8e-17 | 5.43 | 5.53e-08 | 0.94 | FALSE |
| NAcc | Tnrc6a | gene expression | Tnrc6a | 0.02 | 8 | 0.01 | 1.2e-02 | -5.58 | 2.47e-08 | 0.71 | TRUE |
| PL | Lcmt1 | gene expression | Lcmt1 | 0.04 | 1 | 0.04 | 5.7e-05 | 5.22 | 1.75e-07 | 0.44 | FALSE |
| PL | Tnrc6a | gene expression | Tnrc6a | 0.08 | 1786 | 0.09 | 5.1e-10 | 5.3 | 1.13e-07 | 0.81 | FALSE |