Best TWAS P=8.97e-09 · Best GWAS P=8.33e-09 conditioned to 2.41e-02
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
BLA | Mrc2 | gene expression | ENSRNOG00000006548 | 0.07 | 1 | 0.03 | 1.3e-02 | 5.74 | 9.45e-09 | 0.11 | FALSE |
BLA | Marchf10 | intron excision ratio | chr10:90333190:90335149 | 0.13 | 1 | 0.08 | 5.1e-05 | -5.74 | 9.45e-09 | 0.57 | FALSE |
BLA | Marchf10 | intron excision ratio | chr10:90333190:90336385 | 0.22 | 1 | 0.1 | 4.6e-06 | 5.74 | 9.45e-09 | 0.86 | FALSE |
Brain | Marchf10 | alternative polyA | ENSRNOT00000009316 | 0.06 | 2472 | 0.04 | 1.0e-04 | -5.11 | 3.21e-07 | 0.9 | FALSE |
Brain | Crhr1 | gene expression | ENSRNOG00000004900 | 0.14 | 2613 | 0.03 | 1.2e-03 | -5.1 | 3.40e-07 | 0.24 | FALSE |
Brain | Kcnh6 | gene expression | ENSRNOG00000008078 | 0.05 | 1981 | 0.03 | 2.2e-03 | -5.22 | 1.74e-07 | 0.49 | FALSE |
Brain | Marchf10 | intron excision ratio | chr10:90333190:90335149 | 0.1 | 9 | 0.08 | 4.2e-08 | -5.39 | 7.15e-08 | 0.89 | FALSE |
Brain | Marchf10 | intron excision ratio | chr10:90333190:90336385 | 0.17 | 11 | 0.12 | 1.5e-11 | 5.66 | 1.49e-08 | 0.94 | FALSE |
Brain | Strada | intron excision ratio | chr10:91104254:91111276 | 0.05 | 1 | 0.02 | 2.3e-03 | 5.7 | 1.21e-08 | 0.84 | FALSE |
Liver | Cyb561 | intron excision ratio | chr10:90882199:90888604 | 0.16 | 15 | 0.08 | 6.2e-09 | -5.73 | 1.03e-08 | 0.99 | FALSE |
NAcc | Mrc2 | gene expression | ENSRNOG00000006548 | 0.15 | 126 | 0.09 | 6.3e-07 | 5.37 | 7.93e-08 | 0.43 | FALSE |
PL | Marchf10 | gene expression | ENSRNOG00000007084 | 0.14 | 1 | 0.11 | 6.1e-09 | -5.75 | 8.97e-09 | 0.96 | TRUE |
PL | Marchf10 | intron excision ratio | chr10:90333190:90335149 | 0.06 | 13 | 0.04 | 8.1e-04 | -5.58 | 2.35e-08 | 0.81 | FALSE |
PL | Marchf10 | intron excision ratio | chr10:90333190:90336385 | 0.12 | 1 | 0.13 | 4.5e-10 | 5.75 | 8.97e-09 | 0.96 | FALSE |