Best TWAS P=1.92e-10 · Best GWAS P=8.88e-12 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Brain | Trps1 | gene expression | Trps1 | 0.09 | 15 | 0.1 | 6.2e-10 | 5.65 | 1.62e-08 | 0.81 | FALSE |
Liver | LOC102548590 | gene expression | LOC102548590 | 0.47 | 1 | 0.36 | 4.1e-42 | 6.25 | 4.14e-10 | 0.69 | FALSE |
pVTA | LOC102548590 | gene expression | LOC102548590 | 0.13 | 1886 | 0.09 | 1.3e-04 | 5.63 | 1.82e-08 | 0.21 | FALSE |
pVTA | Trps1 | gene expression | Trps1 | 0.1 | 1 | 0.03 | 2.6e-02 | 6.37 | 1.92e-10 | 0.08 | TRUE |
RMTg | LOC102548590 | gene expression | LOC102548590 | 0.23 | 20 | 0.13 | 2.4e-04 | 5.39 | 6.98e-08 | 0.29 | FALSE |
RMTg | Trps1 | isoform ratio | XM_039078763.1 | 0.14 | 2005 | 0.04 | 3.6e-02 | 5.84 | 5.14e-09 | 0.43 | FALSE |