Best TWAS P=2.298037e-07 · Best GWAS P=4.351062e-07 conditioned to 1
| # | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NAcc2 | Galnt16 | gene expression | ENSRNOG00000004589 | 0.57 | 0.41 | lasso | 28 | 0.45 | 1.8e-26 | 5 | 5.2 | 2.3e-07 | 0.96 | 0.19 | 0.81 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.