Best TWAS P=1.92e-08 · Best GWAS P=2.29e-07 conditioned to 4.45e-01
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Ccpg1 | alternative polyA | XM_006243332.4 | 0.02 | 1365 | 0.01 | 1.6e-02 | 5.46 | 4.81e-08 | 0.53 | FALSE |
| Adipose | Ccpg1 | alternative polyA | XM_008766318.3 | 0.02 | 1365 | 0.01 | 1.4e-02 | -5.46 | 4.77e-08 | 0.54 | FALSE |
| Adipose | Pigb | gene expression | Pigb | 0.07 | 47 | 0.06 | 5.0e-07 | 5.36 | 8.40e-08 | 0.58 | FALSE |
| Adipose | Pygo1 | gene expression | Pygo1 | 0.02 | 1311 | 0.02 | 3.1e-03 | -5.62 | 1.92e-08 | 0.47 | TRUE |
| Brain | Dnaaf4 | intron excision ratio | chr8_73700709_73703207 | 0.02 | 1358 | 0.01 | 2.0e-02 | -5.29 | 1.22e-07 | 0.38 | FALSE |
| Brain | Pygo1 | intron excision ratio | chr8_73700709_73703207 | 0.02 | 1352 | 0.01 | 2.0e-02 | -5.3 | 1.18e-07 | 0.39 | FALSE |
| Liver | Ccpg1 | mRNA stability | Ccpg1 | 0.07 | 109 | 0.08 | 1.5e-09 | 5.34 | 9.39e-08 | 0.62 | FALSE |
| NAcc | Ccpg1 | isoform ratio | NM_001401188.1 | 0.11 | 1406 | 0.12 | 1.0e-13 | -5.21 | 1.91e-07 | 0.38 | FALSE |
| RMTg | Dnaaf4 | intron excision ratio | chr8_73699187_73700484 | 0.11 | 1358 | 0.04 | 4.2e-02 | 5.49 | 3.99e-08 | 0.41 | FALSE |