Best TWAS P=5.64e-09 · Best GWAS P=9.11e-11 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Brain | Trps1 | gene expression | Trps1 | 0.09 | 15 | 0.1 | 6.2e-10 | 5.77 | 7.89e-09 | 0.86 | FALSE |
Liver | LOC102548590 | gene expression | LOC102548590 | 0.47 | 1 | 0.36 | 4.1e-42 | 5.58 | 2.43e-08 | 0.31 | FALSE |
pVTA | LOC102548590 | gene expression | LOC102548590 | 0.13 | 1886 | 0.09 | 1.3e-04 | 5.24 | 1.65e-07 | 0.16 | FALSE |
pVTA | Trps1 | gene expression | Trps1 | 0.1 | 1 | 0.03 | 2.6e-02 | 5.83 | 5.64e-09 | 0.06 | TRUE |
RMTg | Trps1 | isoform ratio | XM_039078763.1 | 0.14 | 2005 | 0.04 | 3.6e-02 | 5.24 | 1.62e-07 | 0.42 | FALSE |