Best TWAS P = 1.61e-08 · Best GWAS P= 1.65e-08 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Ilrun | gene expression | Ilrun | 0.75 | 109 | 0.54 | 6.8e-72 | 5.37 | 7.89e-08 | 0.9 | FALSE |
| Brain | Ilrun | gene expression | Ilrun | 0.91 | 22 | 0.71 | 4.1e-92 | -5.32 | 1.06e-07 | 0.89 | TRUE |
| Brain | Pacsin1 | gene expression | Pacsin1 | 0.42 | 13 | 0.17 | 2.8e-15 | -5.3 | 1.18e-07 | 0.92 | FALSE |
| Brain | Taf11 | intron excision ratio | chr20_5958143_5959340 | 0.65 | 23 | 0.39 | 9.3e-39 | 5.65 | 1.61e-08 | 0 | TRUE |
| Liver | Ilrun | gene expression | Ilrun | 0.81 | 2400 | 0.32 | 5.3e-36 | -5.31 | 1.08e-07 | 0.9 | FALSE |
| Liver | Snrpc | gene expression | Snrpc | 0.76 | 133 | 0.3 | 1.1e-33 | -5.44 | 5.27e-08 | 0.9 | TRUE |
| Liver | Snrpc | isoform ratio | XM_039098816.2 | 0.37 | 113 | 0.22 | 9.3e-24 | -5.41 | 6.47e-08 | 0.9 | FALSE |
| Liver | Snrpc | intron excision ratio | chr20_5897866_5898164 | 0.39 | 137 | 0.21 | 2.5e-23 | 5.47 | 4.61e-08 | 0.9 | FALSE |
| Liver | Snrpc | intron excision ratio | chr20_5897976_5898164 | 0.52 | 187 | 0.36 | 3.8e-42 | -5.52 | 3.42e-08 | 0.9 | FALSE |
| NAcc | Ilrun | intron excision ratio | chr20_5814339_5827328 | 0.04 | 1 | 0.01 | 2.8e-03 | 5.31 | 1.09e-07 | 0.22 | FALSE |
| NAcc | LOC108349039 | intron excision ratio | chr20_6210978_6236208 | 0.12 | 1 | 0.01 | 2.5e-02 | 5.37 | 8.09e-08 | 0.08 | TRUE |
| PL | LOC108349039 | isoform ratio | XR_010061002.1 | 0.09 | 1 | 0.01 | 9.8e-03 | -5.31 | 1.09e-07 | 0.07 | FALSE |