Best TWAS P=1.139478e-08 · Best GWAS P=6.003867e-09 conditioned to 1
| # | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NAcc2 | Tmtc2 | gene expression | ENSRNOG00000004585 | 0.21 | 0.09 | lasso | 2 | 0.11 | 1.4e-06 | -5.7 | 5.7 | 1.1e-08 | -0.99 | 0.21 | 0.79 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.