Best TWAS P=2.961158e-07 · Best GWAS P=0.002245058 conditioned to 1
# | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL | Ociad2 | isoform ratio | ENSRNOT00000114702 | 0.13 | 0.08 | enet | 19 | 0.08 | 0.0053 | 3.1 | 5.1 | 3e-07 | 0.98 | 0.32 | 0.19 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.