Best TWAS P=1.093867e-08 · Best GWAS P=6.218523e-06 conditioned to 0.6484307
| # | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | PL2 | Ccng1 | gene expression | ENSRNOG00000003256 | 0.57 | 0.03 | blup | 2175 | 0.19 | 1.1e-10 | -4 | 5.7 | 1.1e-08 | -0.83 | 0.26 | 0.25 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.