Best TWAS P=1.83e-08 · Best GWAS P=1.29e-07 conditioned to 2.64e-99
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | LOC103692619 | alternative polyA | XR_005505908.1 | 0.05 | 1 | 0.03 | 4.5e-04 | -5.22 | 1.75e-07 | 0.27 | FALSE |
Adipose | LOC103692619 | alternative polyA | XR_005505909.1 | 0.04 | 1 | 0.02 | 6.2e-03 | 5.22 | 1.75e-07 | 0.06 | FALSE |
Adipose | LOC103692619 | alternative polyA | XR_005505908.1 | 0.05 | 1 | 0.03 | 4.5e-04 | -5.22 | 1.75e-07 | 0.27 | FALSE |
Adipose | LOC103692619 | alternative polyA | XR_005505909.1 | 0.05 | 1 | 0.03 | 4.2e-04 | 5.22 | 1.75e-07 | 0.29 | FALSE |
Adipose | LOC120103526 | gene expression | LOC120103526 | 0.09 | 1 | 0.06 | 2.1e-07 | -5.25 | 1.54e-07 | 0.88 | FALSE |
Adipose | LOC120103526 | isoform ratio | XR_005505906.1 | 0.04 | 1 | 0.03 | 1.0e-04 | -5.17 | 2.29e-07 | 0.21 | FALSE |
NAcc | LOC120103526 | gene expression | LOC120103526 | 0.14 | 1 | 0.08 | 3.3e-09 | -5.17 | 2.28e-07 | 0.85 | FALSE |
PL | Pnpla8 | gene expression | Pnpla8 | 0.24 | 29 | 0.06 | 4.0e-07 | -5.63 | 1.83e-08 | 0.81 | TRUE |
pVTA | LOC120103526 | alternative polyA | XR_005505901.1 | 0.13 | 2 | 0.06 | 1.4e-03 | 5.31 | 1.10e-07 | 0.71 | FALSE |
pVTA | LOC120103526 | alternative polyA | XR_005505904.1 | 0.13 | 2 | 0.05 | 3.2e-03 | -5.3 | 1.16e-07 | 0.7 | FALSE |