Hub : Traits : Liver weight, right : ←

chr20:5,086,090-7,380,732

Trait: Liver weight, right

Best TWAS P=5.799024e-08 · Best GWAS P=3.367881e-08 conditioned to 1

Associated models

#	Tissue	Gene	Modality	RNA phenotype	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	Adipose	Spdef	gene expression	ENSRNOG00000000491	0.11	0.05	top1	1	0.05	7.4e-06	5.4	-5.4	5.8e-08	-0.61	0.07	0.77	TRUE
2	Liver	Taf11	gene expression	ENSRNOG00000024601	0.09	0.02	enet	58	0.03	5.0e-04	2.0	5.4	7.0e-08	0.38	0.62	0.29	TRUE
3	NAcc	NA	gene expression	ENSRNOG00000058912	0.21	0.11	top1	1	0.11	2.2e-08	5.4	-5.4	7.0e-08	-0.60	0.08	0.91	TRUE
4	OFC	Ilrun	gene expression	ENSRNOG00000038883	0.90	0.22	enet	209	0.52	1.5e-14	3.8	-5.2	1.9e-07	-0.98	0.11	0.89	TRUE
5	OFC	Srpk1	intron excision ratio	chr20:6668484:6669979	0.47	0.00	enet	171	0.07	8.9e-03	-2.6	5.1	2.9e-07	0.61	0.14	0.27	FALSE

h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.