Best TWAS P=3.65e-10 · Best GWAS P=2.31e-08 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Htr7 | alternative polyA | XM_006231307.3 | 0.06 | 2540 | 0.03 | 1.9e-04 | -5.37 | 8.05e-08 | 0.29 | FALSE |
| Adipose | Htr7 | alternative polyA | XM_039089840.1 | 0.07 | 2540 | 0.03 | 2.7e-04 | 5.34 | 9.40e-08 | 0.31 | FALSE |
| Adipose | Htr7 | alternative polyA | XM_006231307.3 | 0.07 | 2540 | 0.04 | 2.7e-05 | -5.72 | 1.09e-08 | 0.35 | FALSE |
| Adipose | Htr7 | isoform ratio | XM_006231307.3 | 0.05 | 2540 | 0.02 | 1.2e-03 | -5.35 | 8.78e-08 | 0.3 | FALSE |
| Adipose | Rpp30 | mRNA stability | Rpp30 | 0.11 | 1 | 0.05 | 1.8e-06 | 5.41 | 6.33e-08 | 0.75 | FALSE |
| Brain | Rpp30 | intron excision ratio | chr1_233791632_233797064 | 0.11 | 1 | 0.09 | 4.4e-09 | -5.48 | 4.19e-08 | 0.82 | FALSE |
| Brain | Rpp30 | intron excision ratio | chr1_233792797_233797064 | 0.09 | 1 | 0.05 | 1.4e-05 | 5.34 | 9.19e-08 | 0.64 | FALSE |
| Brain | Rpp30 | mRNA stability | Rpp30 | 0.12 | 118 | 0.11 | 1.7e-10 | 5.54 | 3.11e-08 | 0.61 | FALSE |
| PL | Rpp30 | isoform ratio | XR_005492259.1 | 0.04 | 1 | 0.05 | 6.7e-06 | 5.39 | 7.14e-08 | 0.6 | FALSE |
| PL | Rpp30 | intron excision ratio | chr1_233791632_233797064 | 0.05 | 2484 | 0.05 | 8.0e-06 | 5.32 | 1.02e-07 | 0.77 | FALSE |
| PL | Rpp30 | intron excision ratio | chr1_233792797_233797064 | 0.08 | 39 | 0.04 | 2.2e-05 | 5.32 | 1.01e-07 | 0.74 | FALSE |
| PL | Rpp30 | mRNA stability | Rpp30 | 0.12 | 31 | 0.06 | 1.8e-07 | -6.27 | 3.65e-10 | 0.76 | TRUE |
| pVTA | Rpp30 | intron excision ratio | chr1_233791632_233797064 | 0.1 | 1 | 0.1 | 3.6e-05 | -5.25 | 1.55e-07 | 0.1 | FALSE |