Hub : Traits : Length with tail : ← →

chr9:49,427,717-51,433,051

Trait: Length with tail

Best TWAS P=4.35243e-09 · Best GWAS P=2.104483e-09 conditioned to 1

Associated models

#	Tissue	Gene	Modality	RNA phenotype	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	Brain	Nabp1	gene expression	ENSRNOG00000015416	0.04	0.03	top1	1	0.03	1.8e-03	-5.4	5.4	5.1e-08	-0.82	0.05	0.13	FALSE
2	Brain	Tmeff2	gene expression	ENSRNOG00000016623	0.09	0.05	blup	2471	0.06	3.5e-06	-5.5	5.7	1.2e-08	-0.94	0.54	0.46	FALSE
3	Brain	Tmeff2	mRNA stability	ENSRNOG00000016623	0.48	0.10	lasso	9	0.16	7.1e-15	-5.3	5.7	9.5e-09	-0.81	0.84	0.16	FALSE
4	IL	Tmeff2	gene expression	ENSRNOG00000016623	0.25	0.09	top1	1	0.09	3.8e-03	-5.4	5.4	7.7e-08	-0.94	0.12	0.05	FALSE
5	Liver	Tmeff2	alternative TSS	ENSRNOT00000081677	0.02	0.01	blup	2471	0.01	2.4e-02	-4.8	-5.9	4.4e-09	0.97	0.46	0.26	TRUE
6	Liver	Tmeff2	alternative TSS	ENSRNOT00000081677	0.02	0.01	blup	2471	0.01	3.2e-02	-4.8	-5.9	4.5e-09	0.97	0.42	0.23	FALSE

h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.