Best TWAS P=2.325457e-07 · Best GWAS P=4.725008e-08 conditioned to 1
| # | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | PL | NA | intron excision ratio | chr4:128600096:128609136 | 0.03 | 0.03 | top1 | 1 | 0.03 | 0.0028 | 5.2 | 5.2 | 2.3e-07 | 0.96 | 0.08 | 0.04 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.