Best TWAS P = 3.40e-10 · Best GWAS P= 2.25e-11 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | LOC108351929 | alternative polyA | XR_010054975.1 | 0.16 | 39 | 0.18 | 1.3e-19 | 5.74 | 9.26e-09 | 0.04 | FALSE |
| Adipose | LOC108351929 | gene expression | LOC108351929 | 0.24 | 2099 | 0.15 | 4.2e-16 | -5.96 | 2.58e-09 | 0.38 | FALSE |
| Adipose | Nabp1 | intron excision ratio | chr9_57619315_57619422 | 0.05 | 2 | 0.02 | 3.1e-03 | 5.45 | 5.04e-08 | 0.59 | FALSE |
| Adipose | LOC108351929 | mRNA stability | LOC108351929 | 0.09 | 3 | 0.03 | 9.8e-05 | -5.95 | 2.75e-09 | 0.08 | FALSE |
| Adipose | Tmeff2 | mRNA stability | Tmeff2 | 0.03 | 1 | 0.02 | 1.1e-03 | 6.01 | 1.88e-09 | 0.03 | FALSE |
| Brain | Tmeff2 | gene expression | Tmeff2 | 0.1 | 2596 | 0.07 | 3.6e-07 | 6.09 | 1.16e-09 | 0.37 | FALSE |
| Brain | Tmeff2 | mRNA stability | Tmeff2 | 0.42 | 21 | 0.25 | 1.4e-23 | 5.8 | 6.50e-09 | 0.06 | FALSE |
| IC | Tmeff2 | gene expression | Tmeff2 | 0.09 | 2596 | 0.03 | 1.9e-02 | 6.21 | 5.18e-10 | 0.43 | FALSE |
| IL | Tmeff2 | gene expression | Tmeff2 | 0.24 | 2596 | 0.06 | 1.8e-02 | 6.28 | 3.40e-10 | 0.22 | TRUE |