Best TWAS P=6.88e-09 · Best GWAS P=6.30e-10 conditioned to 2.11e-02
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Plcb1 | alternative TSS | ENSRNOT00000098292 | 0.02 | 325 | 0.02 | 1.2e-03 | -5.1 | 3.43e-07 | 0.1 | FALSE |
Adipose | Plcb4 | alternative TSS | ENSRNOT00000105709 | 0.03 | 89 | 0.02 | 1.9e-03 | -5.16 | 2.49e-07 | 0.4 | FALSE |
Adipose | Plcb1 | isoform ratio | ENSRNOT00000098292 | 0.02 | 177 | 0.02 | 2.3e-03 | -5.13 | 2.86e-07 | 0.1 | FALSE |
BLA | Plcb1 | alternative polyA | ENSRNOT00000051184 | 0.08 | 1098 | 0.07 | 1.4e-04 | 5.42 | 5.99e-08 | 0.16 | FALSE |
BLA | Plcb1 | alternative polyA | ENSRNOT00000006389 | 0.06 | 20 | 0.06 | 6.2e-04 | -5.33 | 9.89e-08 | 0.18 | FALSE |
BLA | Plcb1 | alternative polyA | ENSRNOT00000051184 | 0.06 | 1098 | 0.05 | 7.9e-04 | 5.39 | 6.85e-08 | 0.15 | FALSE |
BLA | Plcb4 | gene expression | ENSRNOG00000033119 | 0.29 | 31 | 0.19 | 2.9e-10 | -5.25 | 1.49e-07 | 0.32 | FALSE |
Brain | Plcb1 | alternative polyA | ENSRNOT00000006389 | 0.06 | 1 | 0.04 | 7.2e-05 | -5.14 | 2.69e-07 | 0.04 | FALSE |
Brain | Plcb1 | alternative polyA | ENSRNOT00000051184 | 0.04 | 12 | 0.03 | 1.0e-03 | 5.14 | 2.69e-07 | 0.09 | FALSE |
Brain | Plcb1 | alternative polyA | ENSRNOT00000006389 | 0.04 | 16 | 0.03 | 1.3e-03 | -5.14 | 2.69e-07 | 0.09 | FALSE |
Brain | Plcb1 | alternative polyA | ENSRNOT00000051184 | 0.03 | 13 | 0.02 | 3.2e-03 | 5.14 | 2.69e-07 | 0.09 | FALSE |
Brain | Plcb1 | gene expression | ENSRNOG00000004810 | 0.65 | 1098 | 0.61 | 4.9e-72 | 5.12 | 3.14e-07 | 0.09 | FALSE |
Brain | Plcb1 | intron excision ratio | chr3:122686087:122697900 | 0.02 | 1098 | 0.02 | 7.7e-03 | 5.56 | 2.72e-08 | 0.21 | FALSE |
Eye | Plcb4 | alternative TSS | ENSRNOT00000042853 | 0.51 | 150 | 0.15 | 2.4e-03 | 5.75 | 8.73e-09 | 0.17 | FALSE |
Eye | Plcb4 | alternative TSS | ENSRNOT00000105709 | 0.67 | 130 | 0.1 | 1.2e-02 | -5.71 | 1.16e-08 | 0.14 | FALSE |
IL | Plcb1 | gene expression | ENSRNOG00000004810 | 0.33 | 1 | 0.12 | 8.0e-04 | 5.12 | 3.09e-07 | 0.05 | FALSE |
IL | Plcb4 | gene expression | ENSRNOG00000033119 | 0.56 | 1 | 0.26 | 5.9e-07 | -5.14 | 2.70e-07 | 0.19 | FALSE |
Liver | Plcb1 | gene expression | ENSRNOG00000004810 | 0.08 | 49 | 0.1 | 1.1e-10 | -5.34 | 9.46e-08 | 0.09 | FALSE |
NAcc | Plcb1 | isoform ratio | ENSRNOT00000006389 | 0.03 | 1098 | 0.02 | 7.3e-03 | -5.72 | 1.09e-08 | 0.27 | FALSE |
NAcc | Plcb1 | isoform ratio | ENSRNOT00000051184 | 0.03 | 1098 | 0.02 | 9.4e-03 | 5.79 | 6.98e-09 | 0.29 | FALSE |
NAcc | Plcb1 | mRNA stability | ENSRNOG00000004810 | 0.08 | 1 | 0.06 | 1.7e-05 | 5.17 | 2.29e-07 | 0.05 | FALSE |
PL | Plcb4 | alternative TSS | ENSRNOT00000105709 | 0.05 | 1369 | 0.04 | 8.5e-04 | -5.31 | 1.11e-07 | 0.46 | FALSE |
PL | Plcb1 | isoform ratio | ENSRNOT00000006389 | 0.06 | 1098 | 0.05 | 1.1e-04 | -5.79 | 6.88e-09 | 0.4 | TRUE |
PL | Plcb4 | intron excision ratio | chr3:123040745:123107068 | 0.21 | 100 | 0.09 | 3.2e-07 | -5.34 | 9.44e-08 | 0.27 | FALSE |