Best TWAS P = 3.84e-08 · Best GWAS P= 2.99e-08 conditioned to 2.37e-83
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Brain | Dcaf12 | gene expression | Dcaf12 | 0.19 | 139 | 0.11 | 1.5e-10 | -5.39 | 7.16e-08 | 0.73 | FALSE |
| LHb | Phf24 | isoform ratio | NM_001398835.1 | 0.47 | 118 | 0.35 | 4.3e-09 | -5.35 | 8.88e-08 | 0.44 | FALSE |
| Liver | Ccl21 | gene expression | Ccl21 | 0.09 | 191 | 0.11 | 8.9e-12 | -5.28 | 1.30e-07 | 0.75 | FALSE |
| Liver | Ndufb6 | mRNA stability | Ndufb6 | 0.03 | 2308 | 0.02 | 2.2e-03 | -5.24 | 1.62e-07 | 0.42 | FALSE |
| Liver | Rig1 | mRNA stability | Rig1 | 0.05 | 4 | 0.01 | 7.9e-03 | 5.5 | 3.84e-08 | 0.42 | TRUE |
| PL | Aco1 | gene expression | Aco1 | 0.07 | 4 | 0.04 | 1.2e-05 | 5.29 | 1.22e-07 | 0.45 | FALSE |
| PL | Dcaf12 | gene expression | Dcaf12 | 0.05 | 48 | 0.03 | 2.0e-04 | -5.41 | 6.26e-08 | 0.68 | FALSE |
| pVTA | Ccl27 | intron excision ratio | chr5_61738956_61741152 | 0.03 | 23 | 0.03 | 2.9e-03 | -5.34 | 9.05e-08 | 0.37 | FALSE |