chr7:29,535-2,057,232

Trait: Extensor digitorum longus weight

Best TWAS P=1.47e-07 · Best GWAS P=1.45e-07 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Cd63 alternative TSS ENSRNOT00000114033 0.04 1 0.03 7.4e-04 5.11 3.21e-07 0.08 FALSE
Adipose Ikzf4 gene expression ENSRNOG00000005535 0.06 24 0.05 6.2e-06 -5.15 2.63e-07 0.72 TRUE
Adipose Dnajc14 gene expression ENSRNOG00000006844 0.43 27 0.29 3.8e-32 5.15 2.63e-07 0.26 FALSE
Adipose Coq10a gene expression ENSRNOG00000029571 0.03 1 0.02 3.6e-03 -5.15 2.63e-07 0.04 FALSE
Adipose Myl6 intron excision ratio chr7:910945:911642 0.03 1046 0.02 1.9e-03 5.17 2.38e-07 0.63 FALSE
Adipose Atp5f1b mRNA stability ENSRNOG00000002840 0.19 39 0.12 1.5e-13 -5.12 3.13e-07 0.78 FALSE
BLA Gls2 alternative TSS ENSRNOT00000099901 0.06 10 0.06 3.3e-04 5.23 1.73e-07 0.7 FALSE
BLA Naca gene expression ENSRNOG00000002632 0.05 1 0.06 4.3e-04 5.16 2.51e-07 0.09 FALSE
BLA Atp5f1b gene expression ENSRNOG00000002840 0.2 20 0.22 4.6e-12 -5.15 2.63e-07 0.79 FALSE
BLA Erbb3 gene expression ENSRNOG00000004964 0.09 1 0.12 7.2e-07 -5.15 2.63e-07 0.46 FALSE
BLA Itga7 gene expression ENSRNOG00000007905 0.12 13 0.11 1.4e-06 5.17 2.37e-07 0.67 FALSE
BLA Stat2 gene expression ENSRNOG00000031081 0.69 21 0.65 1.7e-45 -5.13 2.82e-07 0.73 FALSE
BLA Smarcc2 gene expression ENSRNOG00000031135 0.08 37 0.08 3.3e-05 -5.2 1.98e-07 0.68 FALSE
BLA Esyt1 gene expression ENSRNOG00000060753 0.18 85 0.17 1.8e-09 -5.24 1.62e-07 0.72 FALSE
BLA ENSRNOG00000062455 gene expression ENSRNOG00000062455 0.23 1023 0.27 1.3e-14 -5.2 2.05e-07 0.71 FALSE
BLA Sarnp isoform ratio ENSRNOT00000009155 0.07 1 0.04 3.6e-03 -5.15 2.66e-07 0.06 FALSE
BLA Rnf41 intron excision ratio chr7:838301:841866 0.06 961 0.05 1.2e-03 5.17 2.33e-07 0.66 FALSE
BLA Myl6 intron excision ratio chr7:910945:911978 0.05 1 0.01 9.8e-02 -5.14 2.74e-07 0.04 FALSE
BLA Tmem198b mRNA stability ENSRNOG00000006827 0.06 1 0.06 6.2e-04 -5.18 2.27e-07 0.06 FALSE
BLA Ormdl2 mRNA stability ENSRNOG00000030120 0.06 1388 0.05 1.5e-03 5.14 2.76e-07 0.58 FALSE
Brain Rbms2 alternative polyA ENSRNOT00000048848 0.05 2 0.03 3.8e-04 5.16 2.41e-07 0.7 FALSE
Brain Rbms2 alternative polyA ENSRNOT00000118787 0.05 1 0.04 3.3e-04 -5.15 2.64e-07 0.25 FALSE
Brain Atp5f1b gene expression ENSRNOG00000002840 0.18 1 0.18 4.5e-16 -5.11 3.18e-07 0.77 FALSE
Brain Tmem198b gene expression ENSRNOG00000006827 0.06 1 0.04 1.4e-04 5.15 2.66e-07 0.23 FALSE
Brain Itga7 gene expression ENSRNOG00000007905 0.16 16 0.13 4.1e-12 5.12 3.07e-07 0.69 FALSE
Brain Sarnp gene expression ENSRNOG00000030520 0.03 1 0.02 2.3e-03 5.26 1.47e-07 0.05 TRUE
Brain Ptges3 isoform ratio ENSRNOT00000101866 0.06 1 0.04 6.2e-05 -5.21 1.91e-07 0.58 FALSE
Brain Bloc1s1 isoform ratio ENSRNOT00000010380 0.11 1 0.08 4.4e-08 -5.15 2.66e-07 0.71 FALSE
Brain Rnf41 intron excision ratio chr7:838383:841866 0.52 35 0.08 7.3e-08 -5.16 2.45e-07 0.72 FALSE
Brain Smarcc2 intron excision ratio chr7:902231:902576 0.03 1 0.01 2.2e-02 5.14 2.78e-07 0.06 FALSE
Brain Ikzf4 mRNA stability ENSRNOG00000005535 0.03 1 0.02 5.5e-03 -5.14 2.70e-07 0.04 FALSE
Brain Dnajc14 mRNA stability ENSRNOG00000006844 0.37 1 0.29 2.2e-27 -5.15 2.66e-07 0.73 FALSE
Brain Stat2 mRNA stability ENSRNOG00000031081 0.33 1 0.34 1.2e-32 -5.19 2.05e-07 0.77 FALSE
IL Dgka gene expression ENSRNOG00000022943 0.3 18 0.08 5.5e-03 -5.11 3.22e-07 0.51 FALSE
IL Myl6 gene expression ENSRNOG00000054140 0.38 1041 0.13 5.4e-04 -5.12 3.01e-07 0.54 FALSE
IL Esyt1 gene expression ENSRNOG00000060753 0.16 1 0.02 1.2e-01 -5.13 2.93e-07 0.06 FALSE
IL Dnajc14 mRNA stability ENSRNOG00000006844 0.66 4 0.25 1.2e-06 -5.19 2.12e-07 0.69 TRUE
LHb Cd63 alternative TSS ENSRNOT00000090381 0.18 1 0.2 2.0e-05 5.09 3.50e-07 0.07 FALSE
LHb Itga7 gene expression ENSRNOG00000007905 0.26 1443 0.11 1.2e-03 5.13 2.94e-07 0.57 FALSE
Liver Rbms2 alternative polyA ENSRNOT00000118787 0.02 1 0.01 9.2e-03 -5.11 3.18e-07 0.03 FALSE
Liver Dgka gene expression ENSRNOG00000022943 0.34 1282 0.28 1.4e-31 5.14 2.75e-07 0.73 FALSE
Liver AC128207.1 gene expression ENSRNOG00000028837 0.05 1 0.04 3.9e-05 -5.21 1.91e-07 0.46 FALSE
Liver Timeless gene expression ENSRNOG00000031916 0.24 934 0.23 8.1e-25 5.1 3.46e-07 0.71 FALSE
Liver Rbms2 isoform ratio ENSRNOT00000048848 0.02 1 0.02 2.5e-03 5.11 3.18e-07 0.04 FALSE
Liver Sarnp intron excision ratio chr7:1251291:1261739 0.03 1 0.02 3.1e-03 5.12 3.02e-07 0.04 FALSE
Liver Sarnp intron excision ratio chr7:1254119:1261739 0.04 1386 0.02 2.4e-03 -5.14 2.79e-07 0.67 FALSE
Liver Pa2g4 mRNA stability ENSRNOG00000004904 0.02 1 0.01 2.5e-02 5.14 2.78e-07 0.03 FALSE
Liver Dgka mRNA stability ENSRNOG00000022943 0.14 1282 0.09 4.5e-10 5.14 2.71e-07 0.72 FALSE
NAcc Rbms2 alternative polyA ENSRNOT00000048848 0.08 1 0.07 4.0e-06 5.24 1.59e-07 0.79 FALSE
NAcc Rbms2 alternative polyA ENSRNOT00000118787 0.07 1 0.07 8.9e-06 -5.22 1.75e-07 0.74 FALSE
NAcc Suox alternative TSS ENSRNOT00000008018 0.03 1 0.04 1.2e-03 5.24 1.59e-07 0.05 FALSE
NAcc Suox alternative TSS ENSRNOT00000108072 0.04 1 0.04 6.1e-04 -5.2 1.95e-07 0.06 FALSE
NAcc Myl6 alternative TSS ENSRNOT00000082518 0.05 1 0.04 5.1e-04 -5.19 2.05e-07 0.15 FALSE
NAcc Myl6 alternative TSS ENSRNOT00000099810 0.04 1 0.03 1.8e-03 5.19 2.05e-07 0.09 FALSE
NAcc Atp5f1b gene expression ENSRNOG00000002840 0.05 1 0.05 1.0e-04 -5.24 1.59e-07 0.38 FALSE
NAcc Tmem198b gene expression ENSRNOG00000006827 0.05 1397 0.03 3.3e-03 5.12 2.99e-07 0.61 FALSE
NAcc Stat2 gene expression ENSRNOG00000031081 0.81 33 0.34 8.9e-26 -5.13 2.88e-07 0.72 FALSE
NAcc Rbms2 isoform ratio ENSRNOT00000048848 0.11 1 0.1 1.1e-07 5.24 1.59e-07 0.82 FALSE
NAcc Rbms2 isoform ratio ENSRNOT00000088619 0.07 1 0.05 8.0e-05 -5.24 1.59e-07 0.3 FALSE
NAcc Cnpy2 isoform ratio ENSRNOT00000004895 0.07 1 0.05 1.2e-04 5.16 2.51e-07 0.41 FALSE
NAcc Rab5b mRNA stability ENSRNOG00000006130 0.03 1145 0.03 5.3e-03 5.11 3.16e-07 0.49 TRUE
NAcc Dnajc14 mRNA stability ENSRNOG00000006844 0.43 14 0.35 7.6e-27 -5.18 2.27e-07 0.72 FALSE
NAcc Stat2 mRNA stability ENSRNOG00000031081 0.16 29 0.16 6.0e-12 -5.13 2.93e-07 0.71 FALSE
OFC Myl6 gene expression ENSRNOG00000054140 0.31 1041 0.19 2.7e-05 -5.12 3.03e-07 0.6 FALSE
OFC Esyt1 gene expression ENSRNOG00000060753 0.26 1 0.15 2.2e-04 -5.13 2.93e-07 0.07 FALSE
OFC ENSRNOG00000062455 gene expression ENSRNOG00000062455 0.15 1019 0.07 8.9e-03 -5.11 3.26e-07 0.45 FALSE
OFC Stat2 mRNA stability ENSRNOG00000031081 0.37 1 0.27 3.7e-07 -5.24 1.59e-07 0.54 FALSE
PL Sarnp alternative TSS ENSRNOT00000096123 0.04 9 0.01 4.0e-02 5.14 2.69e-07 0.59 FALSE
PL Tmem198b gene expression ENSRNOG00000006827 0.05 1397 0.04 9.5e-04 5.14 2.73e-07 0.62 FALSE
PL Stat2 gene expression ENSRNOG00000031081 0.72 939 0.63 1.7e-60 -5.16 2.45e-07 0.73 FALSE
PL Smarcc2 gene expression ENSRNOG00000031135 0.03 1040 0.02 9.9e-03 -5.18 2.24e-07 0.5 FALSE
PL Zc3h10 gene expression ENSRNOG00000040281 0.04 1044 0.05 1.3e-04 5.18 2.24e-07 0.64 FALSE
PL Baz2a gene expression ENSRNOG00000053881 0.06 1 0.06 2.7e-05 -5.22 1.75e-07 0.42 FALSE
PL Esyt1 gene expression ENSRNOG00000060753 0.18 9 0.17 4.7e-13 -5.14 2.69e-07 0.71 FALSE
PL Rnf41 intron excision ratio chr7:838301:840354 0.17 1 0.13 9.3e-10 5.2 1.95e-07 0.77 FALSE
PL Rnf41 intron excision ratio chr7:838301:841866 0.03 1 0.02 2.0e-02 5.12 3.07e-07 0.04 FALSE
PL Prim1 intron excision ratio chr7:446523:449427 0.22 6 0.19 1.6e-14 5.16 2.52e-07 0.81 FALSE
PL Myl6 intron excision ratio chr7:910945:911642 0.04 1 0.04 5.1e-04 5.21 1.91e-07 0.06 FALSE
PL Myl6 intron excision ratio chr7:910945:911978 0.08 1 0.07 4.8e-06 -5.21 1.91e-07 0.57 FALSE
PL Myl6 intron excision ratio chr7:911686:911978 0.06 2 0.06 5.2e-05 5.24 1.60e-07 0.67 FALSE
PL Dnajc14 mRNA stability ENSRNOG00000006844 0.43 1 0.33 2.2e-25 -5.18 2.27e-07 0.76 FALSE
PL Dgka mRNA stability ENSRNOG00000022943 0.08 1283 0.07 7.0e-06 5.15 2.60e-07 0.69 FALSE