Best TWAS P=1.47e-07 · Best GWAS P=1.45e-07 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Cd63 | alternative TSS | ENSRNOT00000114033 | 0.04 | 1 | 0.03 | 7.4e-04 | 5.11 | 3.21e-07 | 0.08 | FALSE |
Adipose | Ikzf4 | gene expression | ENSRNOG00000005535 | 0.06 | 24 | 0.05 | 6.2e-06 | -5.15 | 2.63e-07 | 0.72 | TRUE |
Adipose | Dnajc14 | gene expression | ENSRNOG00000006844 | 0.43 | 27 | 0.29 | 3.8e-32 | 5.15 | 2.63e-07 | 0.26 | FALSE |
Adipose | Coq10a | gene expression | ENSRNOG00000029571 | 0.03 | 1 | 0.02 | 3.6e-03 | -5.15 | 2.63e-07 | 0.04 | FALSE |
Adipose | Myl6 | intron excision ratio | chr7:910945:911642 | 0.03 | 1046 | 0.02 | 1.9e-03 | 5.17 | 2.38e-07 | 0.63 | FALSE |
Adipose | Atp5f1b | mRNA stability | ENSRNOG00000002840 | 0.19 | 39 | 0.12 | 1.5e-13 | -5.12 | 3.13e-07 | 0.78 | FALSE |
BLA | Gls2 | alternative TSS | ENSRNOT00000099901 | 0.06 | 10 | 0.06 | 3.3e-04 | 5.23 | 1.73e-07 | 0.7 | FALSE |
BLA | Naca | gene expression | ENSRNOG00000002632 | 0.05 | 1 | 0.06 | 4.3e-04 | 5.16 | 2.51e-07 | 0.09 | FALSE |
BLA | Atp5f1b | gene expression | ENSRNOG00000002840 | 0.2 | 20 | 0.22 | 4.6e-12 | -5.15 | 2.63e-07 | 0.79 | FALSE |
BLA | Erbb3 | gene expression | ENSRNOG00000004964 | 0.09 | 1 | 0.12 | 7.2e-07 | -5.15 | 2.63e-07 | 0.46 | FALSE |
BLA | Itga7 | gene expression | ENSRNOG00000007905 | 0.12 | 13 | 0.11 | 1.4e-06 | 5.17 | 2.37e-07 | 0.67 | FALSE |
BLA | Stat2 | gene expression | ENSRNOG00000031081 | 0.69 | 21 | 0.65 | 1.7e-45 | -5.13 | 2.82e-07 | 0.73 | FALSE |
BLA | Smarcc2 | gene expression | ENSRNOG00000031135 | 0.08 | 37 | 0.08 | 3.3e-05 | -5.2 | 1.98e-07 | 0.68 | FALSE |
BLA | Esyt1 | gene expression | ENSRNOG00000060753 | 0.18 | 85 | 0.17 | 1.8e-09 | -5.24 | 1.62e-07 | 0.72 | FALSE |
BLA | ENSRNOG00000062455 | gene expression | ENSRNOG00000062455 | 0.23 | 1023 | 0.27 | 1.3e-14 | -5.2 | 2.05e-07 | 0.71 | FALSE |
BLA | Sarnp | isoform ratio | ENSRNOT00000009155 | 0.07 | 1 | 0.04 | 3.6e-03 | -5.15 | 2.66e-07 | 0.06 | FALSE |
BLA | Rnf41 | intron excision ratio | chr7:838301:841866 | 0.06 | 961 | 0.05 | 1.2e-03 | 5.17 | 2.33e-07 | 0.66 | FALSE |
BLA | Myl6 | intron excision ratio | chr7:910945:911978 | 0.05 | 1 | 0.01 | 9.8e-02 | -5.14 | 2.74e-07 | 0.04 | FALSE |
BLA | Tmem198b | mRNA stability | ENSRNOG00000006827 | 0.06 | 1 | 0.06 | 6.2e-04 | -5.18 | 2.27e-07 | 0.06 | FALSE |
BLA | Ormdl2 | mRNA stability | ENSRNOG00000030120 | 0.06 | 1388 | 0.05 | 1.5e-03 | 5.14 | 2.76e-07 | 0.58 | FALSE |
Brain | Rbms2 | alternative polyA | ENSRNOT00000048848 | 0.05 | 2 | 0.03 | 3.8e-04 | 5.16 | 2.41e-07 | 0.7 | FALSE |
Brain | Rbms2 | alternative polyA | ENSRNOT00000118787 | 0.05 | 1 | 0.04 | 3.3e-04 | -5.15 | 2.64e-07 | 0.25 | FALSE |
Brain | Atp5f1b | gene expression | ENSRNOG00000002840 | 0.18 | 1 | 0.18 | 4.5e-16 | -5.11 | 3.18e-07 | 0.77 | FALSE |
Brain | Tmem198b | gene expression | ENSRNOG00000006827 | 0.06 | 1 | 0.04 | 1.4e-04 | 5.15 | 2.66e-07 | 0.23 | FALSE |
Brain | Itga7 | gene expression | ENSRNOG00000007905 | 0.16 | 16 | 0.13 | 4.1e-12 | 5.12 | 3.07e-07 | 0.69 | FALSE |
Brain | Sarnp | gene expression | ENSRNOG00000030520 | 0.03 | 1 | 0.02 | 2.3e-03 | 5.26 | 1.47e-07 | 0.05 | TRUE |
Brain | Ptges3 | isoform ratio | ENSRNOT00000101866 | 0.06 | 1 | 0.04 | 6.2e-05 | -5.21 | 1.91e-07 | 0.58 | FALSE |
Brain | Bloc1s1 | isoform ratio | ENSRNOT00000010380 | 0.11 | 1 | 0.08 | 4.4e-08 | -5.15 | 2.66e-07 | 0.71 | FALSE |
Brain | Rnf41 | intron excision ratio | chr7:838383:841866 | 0.52 | 35 | 0.08 | 7.3e-08 | -5.16 | 2.45e-07 | 0.72 | FALSE |
Brain | Smarcc2 | intron excision ratio | chr7:902231:902576 | 0.03 | 1 | 0.01 | 2.2e-02 | 5.14 | 2.78e-07 | 0.06 | FALSE |
Brain | Ikzf4 | mRNA stability | ENSRNOG00000005535 | 0.03 | 1 | 0.02 | 5.5e-03 | -5.14 | 2.70e-07 | 0.04 | FALSE |
Brain | Dnajc14 | mRNA stability | ENSRNOG00000006844 | 0.37 | 1 | 0.29 | 2.2e-27 | -5.15 | 2.66e-07 | 0.73 | FALSE |
Brain | Stat2 | mRNA stability | ENSRNOG00000031081 | 0.33 | 1 | 0.34 | 1.2e-32 | -5.19 | 2.05e-07 | 0.77 | FALSE |
IL | Dgka | gene expression | ENSRNOG00000022943 | 0.3 | 18 | 0.08 | 5.5e-03 | -5.11 | 3.22e-07 | 0.51 | FALSE |
IL | Myl6 | gene expression | ENSRNOG00000054140 | 0.38 | 1041 | 0.13 | 5.4e-04 | -5.12 | 3.01e-07 | 0.54 | FALSE |
IL | Esyt1 | gene expression | ENSRNOG00000060753 | 0.16 | 1 | 0.02 | 1.2e-01 | -5.13 | 2.93e-07 | 0.06 | FALSE |
IL | Dnajc14 | mRNA stability | ENSRNOG00000006844 | 0.66 | 4 | 0.25 | 1.2e-06 | -5.19 | 2.12e-07 | 0.69 | TRUE |
LHb | Cd63 | alternative TSS | ENSRNOT00000090381 | 0.18 | 1 | 0.2 | 2.0e-05 | 5.09 | 3.50e-07 | 0.07 | FALSE |
LHb | Itga7 | gene expression | ENSRNOG00000007905 | 0.26 | 1443 | 0.11 | 1.2e-03 | 5.13 | 2.94e-07 | 0.57 | FALSE |
Liver | Rbms2 | alternative polyA | ENSRNOT00000118787 | 0.02 | 1 | 0.01 | 9.2e-03 | -5.11 | 3.18e-07 | 0.03 | FALSE |
Liver | Dgka | gene expression | ENSRNOG00000022943 | 0.34 | 1282 | 0.28 | 1.4e-31 | 5.14 | 2.75e-07 | 0.73 | FALSE |
Liver | AC128207.1 | gene expression | ENSRNOG00000028837 | 0.05 | 1 | 0.04 | 3.9e-05 | -5.21 | 1.91e-07 | 0.46 | FALSE |
Liver | Timeless | gene expression | ENSRNOG00000031916 | 0.24 | 934 | 0.23 | 8.1e-25 | 5.1 | 3.46e-07 | 0.71 | FALSE |
Liver | Rbms2 | isoform ratio | ENSRNOT00000048848 | 0.02 | 1 | 0.02 | 2.5e-03 | 5.11 | 3.18e-07 | 0.04 | FALSE |
Liver | Sarnp | intron excision ratio | chr7:1251291:1261739 | 0.03 | 1 | 0.02 | 3.1e-03 | 5.12 | 3.02e-07 | 0.04 | FALSE |
Liver | Sarnp | intron excision ratio | chr7:1254119:1261739 | 0.04 | 1386 | 0.02 | 2.4e-03 | -5.14 | 2.79e-07 | 0.67 | FALSE |
Liver | Pa2g4 | mRNA stability | ENSRNOG00000004904 | 0.02 | 1 | 0.01 | 2.5e-02 | 5.14 | 2.78e-07 | 0.03 | FALSE |
Liver | Dgka | mRNA stability | ENSRNOG00000022943 | 0.14 | 1282 | 0.09 | 4.5e-10 | 5.14 | 2.71e-07 | 0.72 | FALSE |
NAcc | Rbms2 | alternative polyA | ENSRNOT00000048848 | 0.08 | 1 | 0.07 | 4.0e-06 | 5.24 | 1.59e-07 | 0.79 | FALSE |
NAcc | Rbms2 | alternative polyA | ENSRNOT00000118787 | 0.07 | 1 | 0.07 | 8.9e-06 | -5.22 | 1.75e-07 | 0.74 | FALSE |
NAcc | Suox | alternative TSS | ENSRNOT00000008018 | 0.03 | 1 | 0.04 | 1.2e-03 | 5.24 | 1.59e-07 | 0.05 | FALSE |
NAcc | Suox | alternative TSS | ENSRNOT00000108072 | 0.04 | 1 | 0.04 | 6.1e-04 | -5.2 | 1.95e-07 | 0.06 | FALSE |
NAcc | Myl6 | alternative TSS | ENSRNOT00000082518 | 0.05 | 1 | 0.04 | 5.1e-04 | -5.19 | 2.05e-07 | 0.15 | FALSE |
NAcc | Myl6 | alternative TSS | ENSRNOT00000099810 | 0.04 | 1 | 0.03 | 1.8e-03 | 5.19 | 2.05e-07 | 0.09 | FALSE |
NAcc | Atp5f1b | gene expression | ENSRNOG00000002840 | 0.05 | 1 | 0.05 | 1.0e-04 | -5.24 | 1.59e-07 | 0.38 | FALSE |
NAcc | Tmem198b | gene expression | ENSRNOG00000006827 | 0.05 | 1397 | 0.03 | 3.3e-03 | 5.12 | 2.99e-07 | 0.61 | FALSE |
NAcc | Stat2 | gene expression | ENSRNOG00000031081 | 0.81 | 33 | 0.34 | 8.9e-26 | -5.13 | 2.88e-07 | 0.72 | FALSE |
NAcc | Rbms2 | isoform ratio | ENSRNOT00000048848 | 0.11 | 1 | 0.1 | 1.1e-07 | 5.24 | 1.59e-07 | 0.82 | FALSE |
NAcc | Rbms2 | isoform ratio | ENSRNOT00000088619 | 0.07 | 1 | 0.05 | 8.0e-05 | -5.24 | 1.59e-07 | 0.3 | FALSE |
NAcc | Cnpy2 | isoform ratio | ENSRNOT00000004895 | 0.07 | 1 | 0.05 | 1.2e-04 | 5.16 | 2.51e-07 | 0.41 | FALSE |
NAcc | Rab5b | mRNA stability | ENSRNOG00000006130 | 0.03 | 1145 | 0.03 | 5.3e-03 | 5.11 | 3.16e-07 | 0.49 | TRUE |
NAcc | Dnajc14 | mRNA stability | ENSRNOG00000006844 | 0.43 | 14 | 0.35 | 7.6e-27 | -5.18 | 2.27e-07 | 0.72 | FALSE |
NAcc | Stat2 | mRNA stability | ENSRNOG00000031081 | 0.16 | 29 | 0.16 | 6.0e-12 | -5.13 | 2.93e-07 | 0.71 | FALSE |
OFC | Myl6 | gene expression | ENSRNOG00000054140 | 0.31 | 1041 | 0.19 | 2.7e-05 | -5.12 | 3.03e-07 | 0.6 | FALSE |
OFC | Esyt1 | gene expression | ENSRNOG00000060753 | 0.26 | 1 | 0.15 | 2.2e-04 | -5.13 | 2.93e-07 | 0.07 | FALSE |
OFC | ENSRNOG00000062455 | gene expression | ENSRNOG00000062455 | 0.15 | 1019 | 0.07 | 8.9e-03 | -5.11 | 3.26e-07 | 0.45 | FALSE |
OFC | Stat2 | mRNA stability | ENSRNOG00000031081 | 0.37 | 1 | 0.27 | 3.7e-07 | -5.24 | 1.59e-07 | 0.54 | FALSE |
PL | Sarnp | alternative TSS | ENSRNOT00000096123 | 0.04 | 9 | 0.01 | 4.0e-02 | 5.14 | 2.69e-07 | 0.59 | FALSE |
PL | Tmem198b | gene expression | ENSRNOG00000006827 | 0.05 | 1397 | 0.04 | 9.5e-04 | 5.14 | 2.73e-07 | 0.62 | FALSE |
PL | Stat2 | gene expression | ENSRNOG00000031081 | 0.72 | 939 | 0.63 | 1.7e-60 | -5.16 | 2.45e-07 | 0.73 | FALSE |
PL | Smarcc2 | gene expression | ENSRNOG00000031135 | 0.03 | 1040 | 0.02 | 9.9e-03 | -5.18 | 2.24e-07 | 0.5 | FALSE |
PL | Zc3h10 | gene expression | ENSRNOG00000040281 | 0.04 | 1044 | 0.05 | 1.3e-04 | 5.18 | 2.24e-07 | 0.64 | FALSE |
PL | Baz2a | gene expression | ENSRNOG00000053881 | 0.06 | 1 | 0.06 | 2.7e-05 | -5.22 | 1.75e-07 | 0.42 | FALSE |
PL | Esyt1 | gene expression | ENSRNOG00000060753 | 0.18 | 9 | 0.17 | 4.7e-13 | -5.14 | 2.69e-07 | 0.71 | FALSE |
PL | Rnf41 | intron excision ratio | chr7:838301:840354 | 0.17 | 1 | 0.13 | 9.3e-10 | 5.2 | 1.95e-07 | 0.77 | FALSE |
PL | Rnf41 | intron excision ratio | chr7:838301:841866 | 0.03 | 1 | 0.02 | 2.0e-02 | 5.12 | 3.07e-07 | 0.04 | FALSE |
PL | Prim1 | intron excision ratio | chr7:446523:449427 | 0.22 | 6 | 0.19 | 1.6e-14 | 5.16 | 2.52e-07 | 0.81 | FALSE |
PL | Myl6 | intron excision ratio | chr7:910945:911642 | 0.04 | 1 | 0.04 | 5.1e-04 | 5.21 | 1.91e-07 | 0.06 | FALSE |
PL | Myl6 | intron excision ratio | chr7:910945:911978 | 0.08 | 1 | 0.07 | 4.8e-06 | -5.21 | 1.91e-07 | 0.57 | FALSE |
PL | Myl6 | intron excision ratio | chr7:911686:911978 | 0.06 | 2 | 0.06 | 5.2e-05 | 5.24 | 1.60e-07 | 0.67 | FALSE |
PL | Dnajc14 | mRNA stability | ENSRNOG00000006844 | 0.43 | 1 | 0.33 | 2.2e-25 | -5.18 | 2.27e-07 | 0.76 | FALSE |
PL | Dgka | mRNA stability | ENSRNOG00000022943 | 0.08 | 1283 | 0.07 | 7.0e-06 | 5.15 | 2.60e-07 | 0.69 | FALSE |